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  • Electronic Resource  (17)
  • Analytical Chemistry and Spectroscopy  (14)
  • Bacillus subtilis  (3)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Molecular genetics and genomics 210 (1987), S. 578-580 
    ISSN: 1617-4623
    Keywords: Bacillus subtilis ; pGG20 plasmid ; Illegitimate recombination ; Topoisomerase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The illegitimate integration of plasmid pGG20 (the hybrid between Staphylococcus aureus plasmid pE194 and Escherichia coli plasmid pBR322) into the Bacillus subtilis chromosome was studied. It was found that nucleotide sequences of both parental plasmids could be involved in this process. The recombinant DNA junctions between plasmid pGG20 and the chromosome were cloned and their nucleotide sequences were determined. The site of recombination located on the pBR322 moiety carried a short region (8 bp) homologous with the site on the chromosome. The nucleotide sequences of the pE194 recombination sites did not share homology with chromosomal sequences involved in the integration process. Two different pathways of illegitimate recombination in B. subtilis are suggested.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1617-4623
    Keywords: Bacillus subtilis ; Homologous recombination ; Illegitimate recombination ; Homology requirements
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary To determine the minimal DNA sequence homology required for recombination in Bacillus subtilis, we developed a system capable of distinguishing between homologous and illegitimate recombination events during plasmid integration into the chromosome. In this system the recombination frequencies were measured between is pE194 derivatives carrying segments of the chromosomal β-gluconase gene (bglS) of various lengths and the bacterial chromosome, using selection for erythromycin resistance at the non-permissive temperature. Homologous recombination events, resulting in disruption of the bglS gene, were easily detected by a colorimetric assay for β-gluconase activity. A linear dependence of recombination frequency on homology length was observed over an interval of 77 bp. It was found that approximately 70 bp of homology is required for detectable homologous recombination. Homologous recombination was not detected when only 25 by of homology between plasmid and chromosome were provided. The data indicate that homology requirements for recombination in B. subtilis differ from those in Escherichia coli.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Molecular genetics and genomics 213 (1988), S. 465-470 
    ISSN: 1617-4623
    Keywords: Bacillus subtilis ; Illegitimate recombination ; Plasmid cointegrates
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The illegitimate recombination between Staphylococcus aureus plasmids pE194 (or pGG20, the hybrid between pE194 and Escherichia coli plasmid pBR322) and pBD17 (plasmid pUB110 without HpaII C-fragment) was studied in Bacillus subtilis. Cointegrates were generated with the frequency of 1–3x10-8. Among 22 hybrids analysed 9 types of recombinants were found. Nucleotide sequences of all three parental plasmids were involved in intermolecular recombination. Nucleotide sequencing of recombinant DNA junctions revealed that in 8 cases recombination occurred between short homologous regions (9–15 bp). One recombinant was formed using nonhomologous sites. The similarity was demonstrated between nucleotide sequences of the recombination sites of two types of cointegrates and those used for pE194 integration into the B. subtilis chromosome. Possible mechanisms of illegitimate recombination are discussed.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Journal of High Resolution Chromatography 20 (1997), S. 333-336 
    ISSN: 0935-6304
    Keywords: Relative retention values ; Pressure effects on relative retention ; Stationary liquid phase ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Equations have been obtained for the dependence of relative retention and retention indexes on average column pressure. The equations suggested conform well with experimental data. It was shown that limiting value of relative retention (at the pressure approaches zero) is an invariant retention value. The nature of the stationary liquid phase used and its film thickness have a substantial influence on the dependence of relative retention and capacity factor on the pressure.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 0951-4198
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Physics
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Rapid Communications in Mass Spectrometry 3 (1989), S. 30-34 
    ISSN: 0951-4198
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Physics
    Notes: Collision-induced dissociation of peptide ions yields „sequence“ ions arising from dissociations of the peptide backbone. Recently, Biemann and his collaborators have elucidated fragment ions involving cleavage of all or part of the side-chains, and have characterized them as remote-site fragmentations of the type investigated for other molecular species by Gross et al. The present work reports results of experiments conducted using a tandem, hybrid mass spectrometer, and devoted to investigating whether remote-site fragmentations (including side-chain cleavages for peptide ions) can be observed for collision energies substantially lower than the keV range used previously. It was found that (laboratory-frame) collision energies of at least 200 eV, and preferably greater, are required for the formation of such fragments. At collision energies in this range the transmission efficiency of the qQ assembly is much lower than for the more usual range of a few tens of eV; this drop in transmission efficiency becomes increasingly severe with increasing mass of the precursor.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Rapid Communications in Mass Spectrometry 3 (1989), S. 267-272 
    ISSN: 0951-4198
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Physics
    Notes: The collision-induced dissociation (CID) of Cs4I3+ to form Cs3I2+ has been investigated by mass-analysed ion kinetic energy spectroscopy, When helium was used as collision gas the CID process was accompanied by sizable loss of translational energy in the collisional-activation step. However, use of krypton or xenon as collision gas yielded product ions with translational energies higher than that observed for unimolecular reaction in the absence of collision gas. Neon and argon provided intermediate behaviour. Extensive experiments designed to investigate possible explanations for these observations left superelastic collisions of an excited state as the only possibility. Since nothing is known about the structures and electronic states of species like Cs4I3+, the necessarily speculative discussion is based upon general considerations of coupling of translational and electronic energies via crossings between states of the transitory collision complex. These observations emphasise the complexity of the possible processes which can occur as a result of collisions in the keV range.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Rapid Communications in Mass Spectrometry 2 (1988), S. 224-228 
    ISSN: 0951-4198
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Physics
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Rapid Communications in Mass Spectrometry 3 (1989), S. 364-372 
    ISSN: 0951-4198
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Physics
    Notes: Collision induced dissociation (CID) experiments using RF-only quadrupole collision cells normally employ laboratory-frame collision energies Elab of a few tens of eV. Difficulties in inducing CID reactions for larger precursors (〉 600-800 Da) can be attributed in part to collision energies, in the appropriate centre-of-mass reference frame, which are too low. Attempts to overcome this problem by using values of Elab in the range of a few hundreds of eV have been largely unsuccessful. The present work shows that a major reason for this lack of success has been an inability of the instruments used to fulfil the focusing requirements of an RF-only quadrupole cell for such precursors, and their higher mass fragments, in this range of values for Elab. A simple modification permitting use of much higher values of the RF amplitude has been shown to permit the collision cell to be operated so that the ion-beam profile at the entrance aperture is imaged at the exit; improvements in precursor transmission efficiency by up to two orders of magnitude are thus obtainable. Examples of corresponding improvements in fragment-ion spectra of a test octapeptide are also demonstrated. The principal drawback of this approach concerns the poor transmission for low-mass fragments near the stability cut-off (Mathieu parameter qu 〉 0.91); reasons for the non-zero transmission efficiency for fragments with qu 〉 0.91 are discussed, together with methods for alleviating the low-mass transmission problem.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 0030-493X
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A method is described for the investigation of the structure of neutral products from the unimolecular (metastable) dissociative ionizations of mass selected ions, by means of the collisionally induced dissociative ionization of the neutral species themselves. The neutral species, with kilovolt translational energies, enter a positively charged collision cell situated in the second field free region of a standard ZAB-2F mass spectrometer. Dissociative ionization of the neutrals results therein from their collisions with He target gas. The resulting ions are analysed by means of the electric sector and the relative ion abundances are shown to be structure characteristic. For such experiments the neutral flux should be c. ≥ 0.5% of the selected precursor ion flux; the collision gas pressure must be insufficient to cause significant precursor ion fragmentation in the field free region preceding the collision cell. It was shown that HNC is generated in the fragmentation of aniline molecular ions, whereas HCN is the neutral product in the dissociative ionizations of pyridine, benzonitrile and benzyl cyanide. The neutral radical [C, H3, O·] formed together with [CH3CO]+ from ionized methyl acetate has the structure ·CH2OH, but that from the analogous fragmentation of the methyl propanoate molecular ion has the structure CH3O·. Allyl radicals were shown to be generated from [(CH3)2CHCH2OH]+· together with [CH3OH2]+ ions.
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
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