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  • Electronic Resource  (60)
  • Biochemistry and Biotechnology  (47)
  • genetics  (7)
  • Physical Chemistry  (6)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Behavior genetics 12 (1982), S. 111-121 
    ISSN: 1573-3297
    Keywords: neurotransmitters ; genetics ; quantitative genetics ; pharmacology ; environment ; genetic correlations
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Psychology
    Notes: Abstract Genetic studies of neurotransmitter processes to date differ from most behavioral genetic studies in that the former have rarely considered individual variability, have tended to look only for single-gene effects, and generally have overlooked or ignored environmental influences. After examining these differences, we suggest that a rapprochement between the two fields will yield synergistic benefits in studies of the genetics of neuropharmacological processes as they affect behavior.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Behavior genetics 23 (1993), S. 153-162 
    ISSN: 1573-3297
    Keywords: genetics ; selective breeding ; initial sensitivity ; ethanol ; acute tolerance ; mice rats ; chronic tolerance ; SS, LS ; HAS, LAS ; ANT, AT ; FAST, SLOW ; COLD, HOT
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Psychology
    Notes: Abstract Selective breeding for initial sensitivity to ethanol has been carried out by a number of investigators in order to investigate the mechanisms by which ethanol brings about a myriad of effects on the mammalian central nervous system. In addition the availability of these selectively bred animals provides clues to the causes of the genetic predisposition of humans to alcoholism. Eventually it is envisioned that the synteny between the mouse and human genomes will allow identification of specific genes responsible for acute effects of ethanol in both species as well as clues as to how alcoholism in humans can be better identified, prevented, and treated.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-5060
    Keywords: Pelargonium × hortorum ; Pelargonium ; fertilization ; embryo survival ; plastid crosses ; genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The 6×6×4 analysis of variance of the mean percentage embryo survival for six variegated cultivars of Pelargonium × hortorum Bailey, with mutant plastids in their germ layers, and for their isogenic green (G) clones, shows highly significant differences between females (81 to 91 per cent) and between plastid crosses (83 to 91 per cent). Between cultivar differences are attributed largely to additive effects corresponding to additive gene action, and between plastid differences to a lower survival after crosses with white (W) males than with green males. The relationship between overall fertility (% fertilization × survival) and plastid crosses is a stepwise decline in the order G×G〉G×W〉W×G〉W×W (28 to 19 per cent) in which the white embryos growing in a white mother are approximately 30 per cent less fertile than the green embryos in a green mother. The non-surviving embryos are classified into empty, undeveloped and dwarf embryos and submitted to a 6×4 analysis of variance after summing through males. The significant heterogeneity between females is attributed largely to a difference between one cultivar-with a high frequency of dwarf and a low frequency of undeveloped embryos-and the other five cultivars. The absence of a significant plastid effect upon any stage of embryo breakdown indicates that the depressive effect of white plastids is spread evenly throughout development.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Euphytica 33 (1984), S. 169-176 
    ISSN: 1573-5060
    Keywords: Mirabilis jalapa ; marvel of Peru ; four o'clock ; leaf variegation ; mutable genes ; controlling elements ; genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The recurrent back-mutation from homozygous recessive chlorina to heterozygous dominant green in leaves of variegated Mirabilis jalapa is explicable on the hypothesis of a controlling element system. The analysis of variance of mutation frequency suggests that there is polygenic control modifying the major regulatory gene, an idea which is supported by a significant parent offspring regression. There is also evidence for a change of state in the regulatory element giving rise to a new mutability pattern.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1573-5060
    Keywords: Pelargonium x hortorum ; pelargonium ; flower doubleness ; nectary spur ; genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The formation of single flowers of 5 petals and 5 sepals is determined by the homozygous recessive state, dd, of the doubleness gene, D/d, which is epistatic to modifying genes determining flower type. In the presence of the dominant allele, i.e. genotypes DD or Dd, the flowers are semi-double or double. Owing to the D allele alone, the single frequency of 5 petals and 5 sepals is doubled to 10 petals and 10 sepals, of which up to 5 are petaloid, to give a semi-double flower. In addition, in the presence of the D allele, three modifying loci M1/m1, M2/m2, and M3/m3 are activated to give a series of distinct doubles with integral multiples of the basic perianth number. The homozygous recessive genes m1m1 and m2m2 both add an increment of 10 perianth parts, and m3m3 adds an increment of 20 perianth parts. In heterozygotes, M1m1, M2m2 and M3m3, the dominant alleles inhibit the incremental effect of their corresponding recessive alleles. The single flower cultivars investigated probably have the genotype dd, M1M1, M2M2, M3M3 and the semi-double cultivars the genotype Dd, M1m1, M2M2, M3M3. The single flowers have a nectariferous spur, characteristic of the genus, adnate to the pedicel. As the spur is absent from semi-double and double flowers, its presence is assumed to be either a pleiotropic effect of the single flower gene, or to be controlled by an unidentified gene tightly linked with it.
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 0887-3585
    Keywords: β-adrenergic recepor ; chimeric proteins ; receptor subtypes ; ligand binding ; protein structure-function ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: Pharmacological analysis of ligand binding to the β-adrenergic receptor (βAR) has revealed the existence of two distinct receptor subtypes (β1 and β2) which are the products of different genes. The predicted amino acid sequence of the β1 and β2 receptors differ by 48%. To identify the regions of the proteins responsible for determining receptor subtype, chimeras were constructed from domains of the human β1 and hamster β2 receptors. Analyses of the ligand-binding characteristics of these hybrid receptors revealed that residues in the middle portion of the βAR sequence, particularly around transmembrane regions 4 and 5, contribute to the subtype specific binding of agonists. Smaller molecular replacement of regions of the hamster β2AR with the analogous regions from the avian β1AR, however, failed to identify any single residue substitution capable of altering the subtype specificity of the receptor. These data indicate that, whereas sequences around transmembrane regions 4 and 5 may contribute to conformations which influence the ligand-binding properties of the receptor, the subtype-specific differences in amine-substituted agonist binding cannot be attributed to a single molecular interaction between the ligand and any amino acid residue which is divergent between the β1 and β2 receptors.
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Proteins: Structure, Function, and Genetics 25 (1996), S. 28-37 
    ISSN: 0887-3585
    Keywords: protein evolution ; structure prediction ; information theory ; amino acid substitution ; multiple sequence alignment ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: Using an information theoretic formalism, we optimize classes of amino acid substitution to be maximally indicative of local protein structure. Our statistically-derived classes are loosely identifiable with the heuristic constructions found in previously published work. However, while these other methods provide a more rigid idealization of physicochemically constrained residue substitution, our classes provide substantially more structural information with many fewer parameters. Moreover, these substitution classes are consistent with the paradigmatic view of the sequence-to-structure relationship in globular proteins which holds that the three-dimensional architecture is predominantly determined by the arrangement of hydrophobic and polar side chains with weak constraints on the actual amino acid identities. More specific constraints are imposed on the placement of prolines, glycines, and the charged residues. These substitution classes have been used in highly accurate predictions of residue solvent accessibility. They could also be used in the identification of homologous proteins, the construction and refinement of multiple sequence alignments, and as a means of condensing and codifying the information in multiple sequence alignments for secondary structure prediction and tertiary fold recognition. © 1996 Wiley-Liss, Inc.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Proteins: Structure, Function, and Genetics 27 (1997), S. 336-344 
    ISSN: 0887-3585
    Keywords: hydrophobicity ; molecular evolution ; local propensities ; reverse hydrophobic effect ; protein stability ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: To investigate how the properties of individual amino acids result in proteins with particular structures and functions, we have examined the correlations between previously derived structure-dependent mutation rates and changes in various physical-chemical properties of the amino acids such as volume, charge, α-helical and β-sheet propensity, and hydrophobicity. In most cases we found the ΔG of transfer from octanol to water to be the best model for evolutionary constraints, in contrast to the much weaker correlation with the ΔG of transfer from cyclohexane to water, a property found to be highly correlated to changes in stability in site-directed mutagenesis studies. This suggests that natural evolution may follow different rules than those suggested by results obtained in the laboratory. A high degree of conservation of a surface residue's relative hydrophobicity was also observed, a fact that cannot be explained by constraints on protein stability but that may reflect the consequences of the reverse-hydrophobic effect. Local propensity, especially α-helical propensity, is rather poorly conserved during evolution, indicating that non-local interactions dominate protein structure formation. We found that changes in volume were important in specific cases, most significantly in transitions among the hydrophobic residues in buried locations. To demonstrate how these techniques could be used to understand particular protein families, we derived and analyzed mutation matrices for the hypervariable and framework regions of antibody light chain V regions. We found a surprisingly high conservation of hydrophobicity in the hypervariable region, possibly indicating an important role for hydrophobicity in antigen recognition. Proteins 27:336-344, 1997. © 1997 Wiley-Liss, Inc.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Proteins: Structure, Function, and Genetics 29 (1997), S. 461-466 
    ISSN: 0887-3585
    Keywords: protein folding ; molecular evolution ; lattice models ; fitness landscapes ; neutral networks ; spin-glass theory ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: We model the evolution of simple lattice proteins as a random walk in a fitness landscape, where the fitness represents the ability of the protein to fold. At higher selective pressure, the evolutionary trajectories are confined to neutral networks where the native structure is conserved and the dynamics are non self-averaging and nonexponential. The optimizability of the corresponding native structure has a strong effect on the size of these neutral networks and thus on the nature of the evolutionary process. Proteins 29:461-466, 1997. © 1997 Wiley-Liss, Inc.
    Additional Material: 4 Ill.
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  • 10
    ISSN: 0887-3585
    Keywords: type II topoisomerase ; gyrase ; coumarin inhibitor ; clorobiocin ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: Coumarin antibiotics, such as clorobiocin, novobiocin, and coumermycin A1, inhibit the supercoiling activity of gyrase by binding to the gyrase B (GyrB) subunit. Previous crystallographic studies of a 24-kDa N-terminal domain of GyrB from E. coli complexed with novobiocin and a cyclothialidine analogue have shown that both ligands act by binding at the ATP-binding site. Clorobiocin is a natural antibiotic isolated from several Streptomyces strains and differs from novobiocin in that the methyl group at the 8 position in the coumarin ring of novobiocin is replaced by a chlorine atom, and the carbamoyl at the 3′ position of the noviose sugar is substituted by a 5-methyl-2-pyrrolylcarbonyl group. To understand the difference in affinity, in order that this information might be exploited in rational drug design, the crystal structure of the 24-kDa GyrB fragment in complex with clorobiocin was determined to high resolution. This structure was determined independently in two laboratories, which allowed the validation of equivalent interpretations. The clorobiocin complex structure is compared with the crystal structures of gyrase complexes with novobiocin and 5′-adenylyl-β,γ-imidodiphosphate, and with information on the bound conformation of novobiocin in the p24-novobiocin complex obtained by heteronuclear isotope-filtered NMR experiments in solution. Moreover, to understand the differences in energetics of binding of clorobiocin and novobiocin to the protein, the results from isothermal titration calorimetry are also presented. © 1997 Wiley-Liss Inc.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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