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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Perspectives in drug discovery and design 18 (2000), S. 39-60 
    ISSN: 1573-9023
    Keywords: basicity scale ; hydrogen bonding strength ; partition coefficients
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Both proton transfer and hydrogen bonding play important roles in biological systems. In order to measure hydrogen bond basicity, we are building a new scale that differs significantly from the pKa scale of proton transfer basicity. The strength of hydrogen bond acceptors (HBAs) is measured from the Gibbs energy change ΔGHB for the formation of 1:1 hydrogen bonding complexes between hydrogen bond acceptors (bases) and a reference hydrogen bond donor (4-fluorophenol) in tetrachloromethane at 298 K. The pKHB database (1.364 pKHB =–ΔGHB (kcal mol-1)) comprises ca. 1000 hydrogen bond acceptors. The HBA strength depends on (i) the position of the acceptor atom in the periodic table, (ii) polarizability, field/inductive and resonance effects of substituents around the acceptor atom, and (iii) proximity effects including steric hindrance of the acceptor site, intramolecular hydrogen bonding and lone-pair–lone-pair repulsions. The ranking of oxygen and sp nitrogen bases does not depend very much on the solvent and the reference hydrogen bond donor, but sp2 and sp3 nitrogen bases gain strength in solvents of higher reaction field than CCl4 and lose strength toward CH and weak NH donors. The complete scatter pattern exhibited by the pKa versus pKHB plot demonstrates the non-equivalence of the two scales. The HBA strength scale is applied to the prediction of the hydrogen bonding site in polybasic drugs (e.g strychnine and carbimazole), and to the calculation of octanol–water partition coefficients. A possible relationship between HBA strength and antihistaminic activity is studied for the `push–pull' drugs cimetidine, ranitidine and famotidine.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 8 (1995), S. 421-428 
    ISSN: 0894-3230
    Keywords: Organic Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Measured molecular dipole moments and theoretical percentages of mesomeric zwitterionic forms were used to calculate the attractive electrostatic potentials at short, V(s), medium, V(m), and long, V(I), distances. Values of an attraction power function Φ (H) = A + BV (s) V(m) V(I) was then deduced for 18 nitriles and cyanamide vinylogues or iminologues along the C≡N direction. The satisfactory agreement observed between Φ (H) and the hydrogen bond basicity scale pKHB indicates that the method can be a useful tool for the prediction of hydrogen bonding, needing only simple calculations and allowing easy interpretation.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Measurements were made in CCl4 of the formation constant KHB of the 1:1 hydrogen-bonded complexes between the reference donor 4-fluorophenol and the intramolecular hydrogen-bonded systems I (one lone pair on heteroatom Y, one intramolecular hydrogen bond: 8-hydroxyquinaldine and 2-(2-hydroxyphenyl)benzoxazole); II: (two lone pairs, two intramolecular hydrogen bonds: 2,2′-dihydroxybenzophenone and 1,8-dihydroxyanthrone) and III (two lone pairs, one intramolecular hydrogen bond: tropolone, salicylic acid derivatives and guaiacol). The pKHB values and the structural vibrational studies show that system I has a non-zero hydrogen-bond basicity which is due to the oxygen atom. In system II the non-zero basicity is explained by the two oxygens and the breaking of one intramolecular hydrogen bond. In the push-pull system III (e.g. tropolone), in spite of the great decrease of the basicity of the free lone pair by the intramolecular hydrogen bond (e.g. compared with tropone), Y remains the major site for intermolecular association. However in guaiacol, a non push-pull system III, the cooperativity effect makes the phenolic oxygen the major site.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The intramolecular hydrogen bonding (chelation) of salicylaldehyde, methyl salicylate, N,N-dimethylsalicylamide and 2-hydroxyacetophenone was studied by IR spectroscopy in different phases used for partition coefficient determinations. The extent of chelation was found to be highly sensitive to the solvent and to the substituent on the carbonyl group in the orders carbon tetrachloride = chloroform ≫ octanol 〉 water ≫ dimethyl sulfoxide and OMe ≈ Me 〉 H ≫ NMe2. These sequences are discussed in terms of hydrogen-bond acidity of the hydroxyl group, hydrogen-bond basicity of the carbonyl group, planarity of the solute molecule and hydrogen-bond acidity/basicity properties of the solvent. Semi-empirical and ab initio calculations confirmed the substituent sequence.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 0894-3230
    Keywords: Organic Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: An IR spectroscopic study of the hydrogen bonding of Bu3N+N-C≡N with 4-fluorophenol showed that the site of complexation is the nitrogen of the nitrile function. THe formation constant of the 1:1 complex in CCl4 indicates that this cyanamidate is a stronger hydrogen-bond base than is any nitrile, amine or pyridine. The Bu3N+-N- group increases the basicity of the nitrile group very efficiently because of the conjugation of two lone pairs on the anionic nitrogen with the π systems of the cyano group. This conjugation is also exemplified by the very low ν(C≡N) wavenumber (2104 cm-1).
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Liebigs Annalen 1998 (1998), S. 925-931 
    ISSN: 1434-193X
    Keywords: Basicity scale ; Hydrogen bonding ; Ethers ; Peroxides ; FTIR ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Using 4-fluorophenol as a reference hydrogen-bond donor, equilibrium constants, Kf, for the formation of 1:1 hydrogen-bonded complexes have been obtained by FTIR spectrometry for 39 ethers of widely different structure (cyclic and acyclic ethers, crown ethers, glymes, acetals, orthoesters, and disiloxane) and 3 peroxides, in CCl4 at 298 K. The pKHB scale of monoethers extends from 1.44 for 2,3-diadamant-2-yloxirane to -0.53 for hexamethyldisiloxane. The main effects explaining the variation of the hydrogen-bond basicity of sp3 oxygen atoms are (i) the electron-withdrawing field-inductive effect [e.g. in (CF3)2CHOMe], (ii) the electron-withdrawing resonance effect (e.g. in EtOCH=CH2) (iii) the steric effect (e.g. in tBu2O), (iv) the lone-pair-lone-pair repulsion (e.g. in cyclic peroxides), and (v) the cyclization giving the basicity order: oxetane 〉 tetrahydrofuran 〉 tetrahydropyran 〉 oxirane. A spectroscopic scale of hydrogen-bond basicity is constructed from the infrared frequency shift Δν(OH) of methanol hydrogen-bonded to peroxides and ethers. The thermodynamic pKHB scale does not correlate with the ν(OH) scale because of (i) statistical effects in polyethers and peroxides (ii) secondary hydrogen-bond acceptor sites (e.g. in benzyl ether), (iii) variations of the s character of oxygen lone pairs either by conjugation or cyclization, (iv) steric effects, (v) lone-pair-lone-pair repulsions, and (vi) anomeric effects. The ν(OH···O) band shape reveals two stereoisomeric complexes, the most stable being tetrahedral at the ether oxygen atom.
    Type of Medium: Electronic Resource
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