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  • 1
    ISSN: 1432-2234
    Keywords: Carboxyl ; Carboxylate dyad ; Geometry ; Transferability ; Crystals ; Proteins
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary Simple models of the -COO− ... HOOC- moiety were studied byab initio and semiempirical MNDO/PM3 methods combined with retrieval from the Cambridge Crystallographic Database and Protein Data Bank in order to check transferability of the non-bonded geometry. We found that the gas-phase O ... O distance (252 pm) elongates in crystals and proteins to 256±14 and 262±27 pm, respectively. C-O ... O-C dihedral angles are much more variable, however, energetically excluded values appear only exceptionally in crystals and less frequently in proteins. Most probably due to packing effects -COO− ... HOOC-conformations, preferred in the gas phase, are poorly populated in crystals
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Proteins: Structure, Function, and Genetics 28 (1997), S. 131-134 
    ISSN: 0887-3585
    Keywords: apocalmodulin ; calmodulin antagonists ; bisindol alkaloids ; fendiline analogues ; circular dichroism spectroscopy ; protein crystallization ; X-ray diffraction ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: Ca2+-calmodulin is crystallized with two new and potent drugs: a bisindol derivative (KAR-2, 3”-(β-chloroethyl)-2”,4”-dioxo-3,5”-spiro-oxazolidino-4-deacetoxy-vinblastine) with antitumor activity and an arylalkylamine fendiline analogue (N-(3,3-diphenylpropyl)-N'-[1-(3,4-di-n-butoxy-phenyl)-ethyl]-1,3-diaminopropane) with anticalmodulin activity. The crystals diffract beyond 2.8 Å and differ in unit cell parameters from each other as well as from crystals of Ca2+-calmodulin or Ca2+-calmodulin-ligand complexes, as reported thus far. Attempts to crystallize Ca2+-free calmodulin without drugs failed, in consonance with earlier results; however, single Ca2+-free calmodulin crystals diffracting beyond 2.5 Å resolution were grown in the presence of KAR-2. Results indicate that binding of the two drugs to apocalmodulin or Ca2+-calmodulin may induce unique novel protein conformers, targets of further detailed X-ray studies. © 1997 Wiley-Liss Inc.
    Additional Material: 1 Tab.
    Type of Medium: Electronic Resource
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