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  • 1
    ISSN: 1432-0770
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Computer Science , Physics
    Notes: Abstract. Canavier et al. (1997) used phase response curves (PRCs) of individual oscillators to characterize the possible modes of phase-locked entrainment of an N-oscillator ring network. We extend this work by developing a mathematical criterion to determine the local stability of such a mode based on the PRCs. Our method does not assume symmetry; neither the oscillators nor their connections need be identical. To use these techniques for predicting modes and determining their stability, one need only determine the PRC of each oscillator in the ring either experimentally or from a computational model. We show that network stability cannot be determined by simply testing the ability of each oscillator to entrain the next. Stability depends on the number of neurons in the ring, the type of mode, and the slope of each PRC at the point of entrainment of the respective neuron. We also describe simple criteria which are either necessary or sufficient for stability and examine the implications of these results.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Biological cybernetics 80 (1999), S. 87-102 
    ISSN: 1432-0770
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Computer Science , Physics
    Notes: Abstract. The essential dynamics of some biological central pattern generators (CPGs) can be captured by a model consisting of N neurons connected in a ring. These circuits, like many oscillatory nonlinear circuits of sufficient complexity, are capable of multistability, that is, of generating different firing patterns distinguished by the phasic relationships between the firing in each circuit element (neuron). Moreover, a shift in firing pattern can be induced by a transient perturbation. A systematic approach, based on phase-response curve (PRC) theory, was used to determine the optimum timing for perturbations that induce a shift in the firing pattern. The first step was to visualize the solution space of the ring circuit, including the attractive basins for each stable firing pattern; this was possible using the relative phase of N−1 oscillators, with respect to an arbitrarily selected reference oscillator, as coordinate axes. The trajectories in this phase space were determined using an iterative mapping based only on the PRCs of the uncoupled component oscillators; this algorithm was called a circuit emulator. For an accurate mapping of the attractive basin of each pattern exhibited by the ring circuit, the emulator had to take into account the effect of a perturbation or input on the timing of two bursts following the onset of the perturbation, rather than just one. The visualization of the attractive basins for rings of two, three, and four oscillators enabled the accurate prediction of the amounts of phase resetting applied to up to N−1 oscillators within a cycle that would induce a transition from any pattern to any another pattern. Finally, the timing and synaptic characterization of an input called the switch signal was adjusted to produce the desired amount of phase resetting.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Journal of low temperature physics 114 (1999), S. 317-348 
    ISSN: 1573-7357
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract A microscopic many-body analysis of Bose–Einstein condensation in a strongly interacting system of identical bosons is presented in the framework of correlated density matrix theory. With the aid of hypernetted-chain techniques and a replica ansatz for the entropy, the free energy is constructed for a trial density matrix incorporating temperature-dependent two-point dynamical and statistical correlations. The free energy decomposes naturally into contributions from phonon excitations and from two types of quasiparticle excitations (identified as “holes” and “particles”), in addition to a component that becomes the ground-state energy at zero temperature. The subsequent analysis is conducted in terms of two order parameters: A condensation strength Bcc and an exchange strength M. The former measures the breaking of gauge symmetry associated with the development of off-diagonal long-range order that signals Bose condensation; the latter characterizes the violation of particle-hole exchange symmetry. A description of exchange-symmetry breaking is formulated in terms of an analogy with the behavior of a diamagnetic material in a magnetic field, and a physically plausible model for the coupling of the order parameters Bcc and M is proposed. The “particle” and “hole” excitation branches coincide in the normal phase, but follow different dispersion relations in the condensed phase, where exchange symmetry is broken. In a first application of the theory to the λ transition in liquid 4 He, phonon effects (dominant at very low temperatures) are neglected, and simple parametrized forms are assumed for the dynamical correlations and for the hole spectrum, which determines the remaining statistical correlations. Numerical results are reported for the two order parameters and for the quasihole and quasiparticle energies, as functions of temperature through the condensation point. The calculated specific heat shows the characteristic λ shape. Exchange symmetry breaking reduces the Bose–Einstein temperature from that of the ideal Bose gas to a predicted value near 2.2 K.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1573-6873
    Keywords: bistability ; bursting ; ion channels ; modulation ; nonlinear dynamics ; Aplysia ; R15
    Source: Springer Online Journal Archives 1860-2000
    Topics: Computer Science , Medicine , Physics
    Notes: Abstract In a computational model of the bursting neuron R15, we have implemented proposed mechanisms for the modulation of two ionic currents (I R andI SI) that play key roles in regulating its spontaneous electrical activity. The model was sufficient to simulate a wide range of endogenous activity in the presence of various concentrations of serotonin (5-HT) or dopamine (DA). The model was also sufficient to simulate the responses of the neuron to extrinsic current pulses and the ways in which those responses were altered by 5-HT or DA. The results suggest that the actions of modulatory agents and second messengers on this neuron, and presumably other neurons, cannot be understood on the basis of their direct effects alone. It is also necessary to take into account the indirect effects of these agents on other unmodulated ion channels. These indirect effects occur through the dynamic interactions of voltage-dependent and calcium-dependent processes.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Springer
    Journal of computational neuroscience 3 (1996), S. 199-223 
    ISSN: 1573-6873
    Keywords: nonlinear dynamics ; bifurcation ; bursting ; model reduction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Computer Science , Medicine , Physics
    Notes: Abstract An 11-variable Hodgkin-Huxley type model of a bursting neuron was investigated using numerical bifurcation analysis and computer simulations. The results were applied to develop a reduced model of the underlying subthreshold oscillations (slow-wave) in membrane potential. Two different low-order models were developed: one 3-variable model, which mimicked the slow-wave of the full model in the absence of action potentials and a second 4-variable model, which included expressions accounting for the perturbational effects of action potentials on the slow-wave. The 4-variable model predicted more accurately the activity mode (bursting, beating, or silence) in response to application of extrinsic stimulus current or modulatory agents. The 4-variable model also possessed a phase-response curve that was very similar to that of the original 11-variable model. The results suggest that low-order models of bursting cells that do not consider the effects of action potentials may erroneously predict modes of activity and transient responses of the full model on which the reductions are based. These results also show that it is possible to develop low-order models that retain many of the characteristics of the activity of the higher-order system.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    The European physical journal 98 (1995), S. 337-340 
    ISSN: 1434-6036
    Keywords: 67.40 Db ; 68.10.-m
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract We outline a general approach to microscopic evaluation of the properties of strongly interacting, spatially inhomogeneous Bose systems at finite temperatures. A minimum principle for the Helmholtz free energy is used together with an appropriate trial density matrix to generalize the correlated variational wave function theory that has proven so successful in the treatment of the ground states and elementary excitations of quantum fluids at zero temperature. Euler-Lagrange equations are obtained that determine the optimal structure through the one-and two-body densities and the optimal density fluctuation operators and energies characterizing the elementary excitations. Some results of an application of this correlated density matrix theory to the4He liquid-vapor interface are presented, with particular focus on the characterization of resonant vapor modes.
    Type of Medium: Electronic Resource
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