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  • 1
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] In Rhizobium leguminosarum biovar viciae, the nodABCand nodFEL operons are involved in the production of lipo-oligosaccharide signals which mediate host specificity. The structure of these metabolites and those produced in nod mutants links the nodE and nodi genes to specific ...
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-4986
    Keywords: glycosylphosphatidylinositol ; electrospray ; mass spectrometry ; collision induced dissociation ; Trypanosoma
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The multi-component nature of glycosylphosphatidylinositol membrane anchors makes the analysis of their structure complex. Nuclear magnetic resonance spectroscopy of delipidated glycosylphosphatidylinositol-peptide fractions can supply considerable information but requires relatively large quantities of material. High-sensitivity sequencing techniques are available for the oligosaccharide portions of glycosylphosphatidylinositol anchors, but there is no simple and generally applicable technique to complement this information. In this paper we describe the application of electrospray ionization-mass spectrometry and collision induced dissociation to study intact glycosylphosphatidylinositol-peptides from aTrypanosoma brucei variant surface glycoprotein. Collision of the [M + 4H]4+ pseudomolecular ions of two glycosylphosphatidylinositol-peptide glycoforms produced easily interpretable daughter ion spectra, from which detailed information on the lipid moiety, carbohydrate sequence and site of peptide attachment could be obtained. All of the collision induced dissociation cleavage events occurred in the glycosylphosphatidylinositol portion of the glycosylphosphatidylinositol-peptide. This technique supplies complementary data to the high-sensitivity oligosaccharide sequencing procedures and should greatly assist glycosylphosphatidylinositol anchor structure-function studies, particularly when sample quantities are limiting.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 0030-493X
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electrospray ionization mass spectrometry applied to methylated glycosphingolipid samples provides a sensitive molecular mass profile with no detectable fragmentation and little matrix background. In a bovine brain preparation, the components GM1a, GD1a/b and GT1a/b were characterized in detail and several minor entities, GT1, GM3, GA1, GM2, were mass profiled. Two additional materials, unrelated to the o-, a-, b- or c-series, were characterized as hexosamine additions to GM1 and GD1a. Structural details of the major components within these samples were obtained by utilizing low-energy collision tandem mass spectrometry and periodate oxidation, which could serve as a basis for more complex and higher molecular mass preparations. Fragment structures in the collision spectra were assigned with the assistance of C1H3 and C2H3 derivatization and by exploiting the natural carbohydrate and ceramide heterogeneity of the samples. Major fragments originate from C1—O glycosidic rupture with few ring-opening ions. Glycosidic fragments defined details that allow the determination of structural isomers, while specific fragments of the ceramide moiety differentiate sphingosine from N-acyl heterogeneity. When contrasted with high-energy (8 keV) tandem mass spectrometry, low-energy collision-induced dissociation of multiply charged molecular ions provided more abundant structurally diagnostic fragments.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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