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  • 1985-1989  (5)
  • Biochemistry and Biotechnology  (3)
  • 13C NMR  (2)
  • Nuclear Reactions
  • 1
    Electronic Resource
    Electronic Resource
    Application of a degenerate consensus sequence to quantify recognition sites by vertebrate DNA topoisomerase II (1989)
    Chicester [u.a.] : Wiley-Blackwell
    Journal of Molecular Recognition 2 (1989), S. 63-74 
    Details
    ISSN: 0952-3499
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: A consensus sequence has been derived for vertebrate topoisomerase II cleavage of DNA (Spitzner, J. R. and Muller, M. T. (1988) Nucleic Acid. Res. 16, 5533-5556). An independent sample of 65 topoisomerase II sites (obtained in the absence of topoisomerase II inhibitors) was analyzed and found to match the consensus sequence as well as enzyme sites determined in the presence of the anti-tumor drug 4′-(9-acridinyl-amino)-methanesulfon-manisidide (m-AMSA). As originally described, conventional application of the consensus sequence afforded accuracy in the prediction of the locations but not the frequencies of topoisomerase II cleavages. In the present report, we describe a new method which quantitatively discriminates sites from nonsites, called the ‘matrix mean’ method (the mean match of a site to the matrix of base proportions from the original consensus sequence derivation). Furthermore, we derived a second method, called the ‘unique score’ model, which predicts frequency of topoisomerase II activity at a cleavage site. In the unique score method both DNA strands of a site are examined to determine the total number of the consensus positions that match on at least one strand of a potential site. From the new data base of 65 topoisomerase II sites, cleavages were scored for relative cleavage strength. Linear regression analysis showed a significant (p 〈 0.01) correlation between the unique score and cleavage strength. The study was extended to show that the unique score model accurately and quantitatively predicts topoisomerase II sites either in the absence or presence of m-AMSA using the same consensus sequence.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/jmr.300020204
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    Paper (German National Licenses)
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  • 2
    Electronic Resource
    Electronic Resource
    Immobilized pH gradients in capillary tubes and two-dimensional gel electrophoresis (1986)
    Weinheim : Wiley-Blackwell
    Electrophoresis 7 (1986), S. 505-511 
    Details
    ISSN: 0173-0835
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Isoelectric focusing in mixed carrier ampholyte-immobilized pH gradients (CA-IPG) is an effective way to separate proteins by charge. A method to prepare CA-IPG in capillary tubes and the description of the equipment used are outlined. Two-dimensional gel electrophoresis patterns of human serum and liver biopsies, with isoelectric focusing and CA-IPG as the first dimension, are presented. The comparison with two-dimensional gel electrophoresis patterns obtained by conventional carrier ampholyte pH gradient separation shows the excellent resolution and potential of this technique.
    Additional Material: 11 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/elps.1150071105
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    Paper (German National Licenses)
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  • 3
    Electronic Resource
    Electronic Resource
    13C and proton nuclear magnetic resonance spectra of trans-[arylbromobis(triethyl phosphine)palladium(II)] and related compounds. The π-donor ability of the Ni(PEt3)2X, Pd(PEt3)2X and Pt(PEt3)2X groups (1986)
    Chichester : Wiley-Blackwell
    Organic Magnetic Resonance 24 (1986), S. 243-246 
    Details
    ISSN: 0749-1581
    Keywords: 13C NMR ; 1H NMR ; Ni-Pd-Pt series ; Ni-Pd-Pt substituent effects ; Ni/Pd/Pt-induced paramagnetic shifts ; M(PEt3)2X substituents ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: 13C and proton NMR spectra of several arylpalladium and some arylnickel and arylplatinum complexes have been compared. The Ni(PEt3)2X and Pd(PEt3)2X substituents induce a paramagnetic shift of Cipso (of the phenyl ring) which is much larger than that induced by Pt(PEt3)2X. However, there are no significant differences along the Ni/Pd/Pt series for the ortho, meta and para positions. For the six compounds of general formula trans-[ArPdBr(PEt3)2] reported here, the mean Δ(δ)C values induced on the ArH by the introduction of the PdBr(PEt3)2 substituent are found to be 26.9 (Cipso), 7.2 (Cortho), -1.1 (Cmeta), -5.5 (Cpara), -0.03 (Hortho), -0.28 (Hmeta) and -0.38 ppm (Hpara).
    Additional Material: 4 Tab.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/mrc.1260240311
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  • 4
    Electronic Resource
    Electronic Resource
    Investigation of prototropic equilibria by carbon-13 relaxation time analysis (1987)
    Chichester : Wiley-Blackwell
    Organic Magnetic Resonance 25 (1987), S. 16-20 
    Details
    ISSN: 0749-1581
    Keywords: 13C NMR ; 13C Relaxation Times ; Prototropic equilibria ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Quaternary 13C dipole-dipole spin-lattice relaxation times are used to analyse prototropic equilibria of 2-acetylbenzimidazole (1) and 4-azabenzimidazole in DMSO-d6 solutions. For the first compound, fast exchange between the two chelated structures prevails for 13C relaxation times, whereas proton and 13C chemical shifts characterize a slow exchange. For 4-azabenzimidazole, 13C and 1H spectra do not exhibit absorptions from structures in slow exchange. Analysis of the T1 values of carbons 8 and 9 before and after isotopic exchange of the labile amino hydrogen clearly show that the major component of the equilibrium is the 3H structure.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/mrc.1260250105
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  • 5
    Electronic Resource
    Electronic Resource
    Automatic classification of two-dimensional gel electrophoresis pictures by heuristic clustering analysis: A step toward machine learning (1988)
    Weinheim : Wiley-Blackwell
    Electrophoresis 9 (1988), S. 136-142 
    Details
    ISSN: 0173-0835
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: The interpretation of two-dimensional gel electrophoresis (2-DGE) profiles can be facilitated by artificial intelligence and machine learning programs. We have incorporated into our 2-DGE computer analysis system (termed MELANIE-Medical Electrophoresis Analysis Interactive Expert system) a program which automatically classifies 2-DGE patterns using heuristic clustering analysis. This program is a step toward machine learning. In this publication, we describe the classification method and the preliminary results obtained with liver biopsy electrophoretograms. Heuristic clustering is also compared to other classification techniques.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/elps.1150090307
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    Paper (German National Licenses)
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