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  • Computational Chemistry and Molecular Modeling  (19)
  • Localization  (1)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical chemistry accounts 64 (1983), S. 107-116 
    ISSN: 1432-2234
    Keywords: Localization ; Orbitals of nucleotide bases
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract For the four nucleotide bases cytosine, uracil, adenine and guanine both Boys (B) and Edminston-Ruedenberg (ER) localization procedures of the ab initio canonical orbitals have been performed. The results obtained for both σ-π separation and by treating all electrons together show a very good localization for all electrons (one-center lone-pairs and two-center localized orbitals even for π-electrons) and a rather good localization for the virtuals applying both B and ER criteria. The results of the two methods are essentially identical. These results suggest that the application of localized orbitals will open new possibilities for the calculation of correlation in extended systems.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper, methods of correlation corrections for 1D and 2D periodic systems as well as for 1D nonperiodic polymers are reviewed. These procedures include not only the correlation correction of the total energy per unit cell, but also the recalculation (using the generalized electronic polaron model) of the band structures themselves in the periodic case, as well as the density of states (DOS) in nonperiodic chains. In both cases the inverse Dyson equation was used in an iterative way in the MP/2 and MP/3 level. The programming of the same procedure for the coupled cluster method is in progress. In a number of examples (ground state properties of (SN)X, the gap of alternating trans-polyacetylene, the exciton spectrum of diacetylene, polyglycine and polyalanine, of a cytosine stack, the bulk modules of polyethylene, the hopping conductivity of insulin), we have obtained quite good agreement with experiment, if a good basis set ab initio calculation was supplemented of the correlation correction at the bands or DOS curves, respectively. In the second part of the paper a new method is developed to take into account the simulataneous effect of a static and a periodic time-dependent electric field on the one-electron wave functions and on the total electronic energy of a periodic polymer. The method uses a variational technique (coupled Hartree-Fock equations) instead of perturbation theory for the time-dependent one-electron wave functions. The proper treatment of the potential caused by the field, which in this way does not destroy the periodicity of the polymer, as well as the inclusion of correlation at the MP/2 level of the t-and ω-dependent quasienergy per unit cell is part of the method. Finally, it is shown how one obtains in the usual way the different polarizabilities, second- and third-order hyperpolarizability tensor elements with the help of the derivatives of the quasienergies according to the different field (both static and time-dependent) components. © 1993 John Wiley & Sons, Inc.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: To model a real 20-component protein chain, the results of the electronic density of states (DOS) of seven-component periodic and aperiodic polypeptide chains calculated on the basis of ab initio matrix block negative factor counting method are presented. The seven amino acid residues taken into account are rather different: glycine, serine, cysteine, asparagine, histidine, aspartic acid, and tryptophane. In the case of aperiodic chains, the energy states are found to be distributed over a much wider range of energy than in the corresponding periodic chains. In the intrinsic state, both periodic and aperiodic polypeptide chains are predicted to be insulators. The effect of the block copolymerization on the DOS distribution and the band gap values of both periodic and aperiodic polypeptide chains has been also investigated. Finally, the methods to calculate from the DOS curves hopping conductivities and the possibilities to compare them with experiment are outlined.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 42 (1992), S. 997-1008 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio band structure results of polypyrrole (PPY) and polythiophene (PTP) obtained with a double-zeta basis set are reported. The electronic density of states (DOS) of the various quasione-dimensional copolymers (superlattices) of the type (AmBn)x (A = pyrrole; B = thiophene) have been calculated numerically within the ab initio SCF tight-binding approximation. These copolymers on the basis of the band positions of PPY and PTP are found to belong to the class of type II (staggered) superlattices. The trends in their electronic properties as a function of (i) composition (m/n), (ii) block sizes m and n, and (iii) arrangement of blocks in the copolymer chain are discussed.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 12 (1977), S. 925-935 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have reduced the Breit-type equation written down for 3 electrons to the 8 large components of the wave function in the (v/c)2 (Pauli) approximation. This procedure required appropriate handling of the 64 scalar equations which result in this instance. According to the results obtained within the accuracy of (v/c)2 all the terms are the same as those obtained by summing up the terms of the reduced 2-electron Breit's equation to 3 electrons. This statement is no longer valid, however, if during the reduction procedure we would go beyond the (v/c)2 approximation. Finally there is a discussion about how to begin developing a relativistic many-electron theory valid for the inner shell electrons of heavy atoms within the accuracy of the fine structure constant.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 18 (1980), S. 1143-1155 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper an attempt is made to define charge transfer trying also other ways than Mulliken's population analysis. To illustrate this the amount of transferred charge (q) in the complexes HCONH2 + OHC - CHO in two relative geometrical positions, H2O + H2O and H2O + Li+ has been calculated with the help of Mulliken's population analysis using the wave function of the complex on the one hand and in the framework of different methods to subdivide the total space of the complex into subspaces for the acceptor and donor molecule, respectively, on the other hand. The results obtained show that Mulliken's population analysis gives a qualitatively correct description of the charge transfer process but to obtain the finer details most probably the use of a single number (q) is not sufficient. Further, the change in the total energy with respect to an effective charge transfer of a water dimer and of a solvent-cation complex has been investigated using the new mutually consistent field method. In this way the amount of transferred charge as well as the charge transfer interaction energy have been obtained in one step. These results have been compared with calculations applying second-order perturbation theory including overlap and the supermolecule method.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 683-692 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Using the newly developed discrete variant of the k · p perturbation theory for linear chains an expression is derived for the dispersion interaction between two infinite chains valid for both insulating and metallic polymers. It is shown that the formally divergent dispersion energy is also finite for metallic systems, but it may be considerably enhanced in polymers with partly filled bands as compared with insulting ones. The accuracy of the proposed k · p expansion is investigated on model chains through comparisons with direct ab initio Hartree-Fock crystal orbital calculations. Applying second order perturbation theory an explicit formula in terms of band parameters is given for the numerical calculation of the dispersion energy.
    Additional Material: 2 Tab.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 21 (1982), S. 917-926 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is shown how the cluster CPA can be used to obtain the local density of states p(E) in a half-infinite or infinite random polymer chain. Calculations were performed for p(E) in a system composed of two coupled random chains with nearest neighbors interaction.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 39 (1991), S. 839-849 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We present a treatment of chemisorption that uses the Green matrix of the surface and the admolecule, as well as a cluster calculation of a small surface cluster. Since full HF-SCF-band structures with nonlocal exchange are available now for larger systems for a couple of years, it is possible to treat the substrate surface and the admolecule on equal footing. This offers a natural way to solve the embedding problem. We have applied the formalism to the adsorption of H2 on beryllium and show that in contrast to cluster calculations there appears a binding, which is experimentally verified.
    Additional Material: 7 Ill.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 3 (1969), S. 621-634 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Generalizing the method of Hirschfelder, Curtiss and Bird for the calculation of the polarizability of molecules, we have calculated both the diagonal and off-diagonal polarizability tensor elements of the nucleotide bases and base pairs. In the course of calculations also the components of the permanent dipole moments have been computed for these systems.On the basis of the results obtained we have determined also the critical field strengths necessary to break off a base pair and thus to induce the unwinding of the DNA double helix. According to the data obtained, a field strength of the order 108 V/cm can induce the unwinding of DNA if its direction lies in the plane of the base pairs.
    Additional Material: 3 Tab.
    Type of Medium: Electronic Resource
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