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  • 1
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 22 (1982), S. 1271-1279 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: There is considerable evidence indicating that the carcinogenic action of vinyl chloride involves metabolic conversion to the epoxide (chlorooxirane) as the initial step. In order to learn more about its subsequent behavior, we have computed structures, energies and other properties for two different protonated forms of the epoxide, and also for two possible rearrangement products, chloroacetaldehyde and acetyl chloride. An ab initio SCF-MO procedure (GAUSSIAN 70) was used. Oxygen protonation is found to weaken both C—O bonds, the effect being greater for the bond involving the carbon bearing the chlorine. Chlorine protonation leads to a marked weakening of the C—Cl bond; this suggests a possible loss of HCl, leaving behind a carbonium ion (and possible alkylating agent or rearrangement precursor). Thus, while C—O bond breaking is doubtless an important reaction pathway for chlorooxirane, our results indicate that attention should also be focused upon the C—Cl bond; its rupture may conceivably be a key step in the biological action of vinyl chloride.
    Zusätzliches Material: 3 Tab.
    Materialart: Digitale Medien
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  • 2
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 37 (1990), S. 271-289 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: We have carried out an ab initio STO-5G computational analysis of the electrostatic potentials of four structural analogues of the highly toxic 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and four related aromatic systems benzo[a]pyrene, benz[a]anthracene, and two isomeric benzoflavones. These systems, to varying degrees, induce aryl hydrocarbon hydroxylase activity and are believed to interact with the same cytosolic receptor in initiating their biochemical responses. Our present results for the TCDD analogues support and have allowed us to further qualify our early observations regarding factors which are linked to high biological activities in the dibenzo-p-dioxins and structurally similar systems. We find that a high degree of activity appears to require nonoverlapping negative potentials above all or most of the lateral regions, with an observed optimum range of magnitudes. In systems with central oxygens, it is required that the negative oxygen potentials be small and weak; however, oxygen negative regions in the molecule are not necessary for high activity. The observed differences between the potential patterns of the four aromatic systems and those of TCDD and its active analogues may reflect an inherent dissimilarity in the nature of their interactions with the cytosolic receptor. That the carbonyl oxygen negative potential of 7,8-benzoflavone is significantly more negative than its isomer's supports earlier speculation concerning the former's more effective inhibiting effects on metabolic oxidation.
    Zusätzliches Material: 9 Ill.
    Materialart: Digitale Medien
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  • 3
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 14 (1978), S. 245-251 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: Relationships between the total energy E, the nuclear-electronic attraction energy Vne, and the interelectronic repulsion energy Vee are derived for isoelectronic series of atoms and ions. Using these, it is possible to determine Vne and Vee for the members of such series from a knowledge of just their total energies. The method is applied to the ground and first excited states of the two-electron series, and the ground states of the three- and four-electron series, and the results are discussed.
    Zusätzliches Material: 3 Tab.
    Materialart: Digitale Medien
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  • 4
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 25 (1984), S. 493-502 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: We have carried out a computational study of the reactive properties of chlorooxirane, the metabolically produced epoxide of vinyl chloride that is believed to be a direct-acting carcinogenic form of this molecule. An ab initio SCF-MO procedure (GAUSSIAN 70) was used to compute the energy requirements for stretching the C—Cl and both C—O bonds (SN1 reactivity) and to determine the course of the epoxide's possible SN2 reactions with ammonia, taken as a model for nucleophilic sites on DNA. The epoxide was assumed to be protonated; both the oxygen- and chloro-protonated forms were considered. At each step along the various reaction pathways, the structure of the system was reoptimized. For the oxygen-protonated epoxide, the C1—O bond has a significantly lower energy barrier to stretching than does the C2—O. (The carbon bearing the chlorine is designated C1.) However, both are very much higher than that of the C—Cl bond in the chloro-protonated form, confirming our earlier finding of the relative weakness of this bond. In the SN2 processes involving ammonia, intermediate complexes are formed with both carbons of the oxygen-protonated epoxide, the C2-complex being the more stable. However, the most stable ammonia complex occurs at C1 of the chloro-protonated epoxide. Our calculated results, both the energies and also the geometry changes, allow us to propose two possible mechanisms for the formation of the 7-N-(2-oxoethyl) derivative of guanine that has been observed to be the major in vivo DNA alkylation product of vinyl chloride and has been suggested as possibly being responsible for its carcinogenicity. One of these mechanisms is SN1 and starts with the chloro-protonated epoxide; the other is SN2 and involves the oxygen-protonated form.
    Zusätzliches Material: 3 Tab.
    Materialart: Digitale Medien
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  • 5
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 25 (1984), S. 869-879 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: The aim of this study has been to determine how the hydrogen bond between formaldehyde and ammonia is affected by the ring-opening interaction of protonated ethylene oxide with the ammonia nitrogen. Our purpose is to gain insight into the possible effect of carcinogenic epoxides upon the hydrogen bonding within DNA base pairs; it is known that such epoxides react with nucleophilic sites in DNA, including amine nitrogens that are involved in hydrogen bonds to carbonyl groups. We have used an ab initio self-consistent-field molecular orbital procedure to compute optimized structures, interaction energies, and other properties of interest. The H2CO·HNH2 system and the protonated epoxide were found to form two stable complexes, with syn and anti orientations. Their formation is accompanied by a significant overall strengthening of the H2CO·HNH2 hydrogen bond, as indicated by both calculated force constants and bond lengths. An analysis of these and other properties, such as atomic charges, suggests that the interaction is leading to the formation of N-protonated ethanolamine, which is linked to the formaldehyde through the proton on the nitrogen. If carcinogenic epoxides have a similar strengthening effect upon some of the hydrogen bonds in DNA, it could interfere in the replication and transcription processes.
    Zusätzliches Material: 4 Ill.
    Materialart: Digitale Medien
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  • 6
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 26 (1984), S. 425-438 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: Our objective in this work is to gain insight into the contrasting carcinogenic activities of vinyl chloride (definitely carcinogenic) and trans-dichloroethylene (apparently inactive). The initial metabolic step for each molecule is believed to be epoxidation of the double bond, and there is evidence indicating that for vinyl chloride, this epoxide (chlorooxirane) is its ultimate (direct-acting) carcinogenic form. This article presents the findings of a computational study of the reactive properties of trans-dichlorooxirane (the epoxide of trans-dichloroethylene). An ab initio SCF-MO procedure was used to determine the energy requirements for stretching the C—O and C—Cl bonds (SN1 reactivity) and to study the epoxide's SN2 interactions with ammonia, taken as a model nucleophile. The starting points were the oxygen- and chlorine-protonated forms of the epoxide. The structure of the system was reoptimized at each step along the various reaction pathways. The results of this work are compared to an analogous earlier study of the reactive properties of chlorooxirane. The chlorineprotonated C—Cl bonds are found to have much lower energy barriers to stretching than do the oxygen-protonated C—O bonds. In the SN2 processes, intermediate complexes are formed with ammonia by both the oxygen- and the chlorine-protonated epoxides; the latter complexes are the more stable. Based on our results, we propose two mechanisms (one SN1 and the other SN2) whereby trans-dichlorooxirane can interact with N7 of guanine to produce an adduct analogous to one formed by chlorooxirane, which has been found to be the primary in vivo DNA alkylation product of vinyl chloride and to which has been attributed the carcinogenicity of the latter. Overall, trans-dichlorooxirane is found to be chemically more reactive than chlorooxirane; this may help to account for the much lesser carcinogenic and mutagenic activities of trans-dichloroethylene, since the epoxide may be reacting with other cellular nucleophiles before it reaches the key site(s) at which the carcinogenic or mutagenic interaction would occur. We also offer some speculations concerning other possible factors related to the differing carcinogenicities of vinyl chloride and trans-dichloroethylene, such as ease of epoxide formation and the likelihood of oxygen protonation.
    Zusätzliches Material: 3 Tab.
    Materialart: Digitale Medien
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  • 7
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 31 (1987), S. 569-579 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: There is considerable evidence indicating that the primary in vivo DNA alkylation product of vinyl chloride, believed to be responsible for its carcinogenicity, is the 7-N-(2-oxoethyl) derivative of guanine. Using a representative keto-enol system, we have studied computationally two possible equilibria involving this adduct. The first is between the 2-oxoethyl derivatives of the keto and enol forms of the representative system, whereas the second is between the 2-oxoethyl derivative of the keto form and the corresponding hemiacetal. In the case of the analogous guanine derivatives, such equilibria could lead to disruption of the hydrogen bonding between guanine and cytosine in DNA and could cause miscoding and replicational and transcriptional errors. An ab initio self-consistent field molecular orbital study has been carried out using the GAUSSIAN 82 system of programs. Optimized structures and energies have been calculated at the 2-21G level for the representative keto-enol system and its 2-oxoethyl and hemiacetal forms. The formation of the 2-oxoethyl adduct was found to have no significant effect upon this keto-enol equilibrium, which strongly favors the keto form. Our calculations further show hemiacetal formation to be an unlikely possibility for this system. On the basis of these results and recent data on guanine tautomers, we speculate about the analogous equilibria involving the guanine derivatives.
    Zusätzliches Material: 1 Ill.
    Materialart: Digitale Medien
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  • 8
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 38 (1990), S. 645-653 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: An ab initio self-consistent-field molecular orbital (SCF-MO) procedure has been used to compute the average local ionization energies [Ī(r)] of some strained molecules on three-dimensional surfaces defined by the contour of electronic density equal to 0.002 electrons/bohr3. Ī(r) is rigorously defined within the framework of SCF-MO theory and can be interpreted as the average energy needed to ionize an electron at any point in the space of a molecule. Thus, the positions of the smallest Ī(r) values (ĪSmin) on the surfaces of molecules are the sites expected to be the most reactive to electrophiles. We find ĪSmin, near the C—C bond midpoints of saturated three-membered, but not foru-membered, hydrocarbon rings. These ĪS,min are interpreted as reflecting the “σ-aromatic” character of the former. Our Ī(r) data effectively provide a “fingerprint” characterizing saturated three-membered rings, which is useful, for example, in analyzing molecules such as [1.1.1] propellane. Our results for the latter are consistent with the interpretation of it having a biradical character, as has been suggested earlier.
    Zusätzliches Material: 1 Ill.
    Materialart: Digitale Medien
    Bibliothek Standort Signatur Band/Heft/Jahr Verfügbarkeit
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  • 9
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 37 (1990), S. 611-629 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: We have carried out a computational study of hydrazine and five of its 1,1-dimethyl derivatives, focusing on their electrostatic potentials and relative bond strengths. Our approach has involved the calculation of ab initio self-consistent-field molecular orbital wave functions and molecular properties using the GAUSSIAN 82 system of programs. The electrostatic potentials of the hydrazines possess negative regions of varying sizes and strengths associated with the nitrogens of the α-diamino linkages. Through an analysis of the positions of the most negative potentials of these regions, we have obtained directly the dihedral angles between the nitrogen lone pairs in these systems. Our use of the electrostatic potential to obtain these angles is a direct and general approach, in contrast to indirect procedures used in the past. We find this dihedral angle to be close to 90° in hydrazine, with variations in the substituted hydrazines that depend on the nature of the substituents. A highly polar structure is found for 1-chloromethyl-1-methylhydrazine, which involves a delocalization of electronic charge from the substituted nitrogen towards the CH2Cl group. We find that substituents able to withdraw significant amounts of electronic density from the central nitrogen lone pair regions, either through resonance or by induction, have a slight bond strengthening effect on the central N-N bond. This is attributed to a decrease in the repulsion between the weakened nitrogen lone pair regions. The difficulties encountered in seeking the controlled oxidation of hydrazine to nitro derivatives may be due, in part, to the fact that two factors which would favor this, highly negative nitrogen potentials and strong N-N bonds, are opposing in nature.
    Zusätzliches Material: 8 Ill.
    Materialart: Digitale Medien
    Bibliothek Standort Signatur Band/Heft/Jahr Verfügbarkeit
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  • 10
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 26 (1984), S. 155-166 
    ISSN: 0020-7608
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: This article summarizes and extends our computational studies (ab initio, SCF-MO) of the reactive properties of halogenated hydrocarbon epoxides. For five such epoxides (ethylene oxide, propylene oxide, chlorooxirane, trans-dichlorooxirane, and epichlorohydrin), we analyze and compare first the energy requirements for stretching the C—O and C—Cl bonds, and second, the reactivities of the epoxide ring carbons toward a model nucleophile, ammonia. At each step along the various reaction pathways, the structure of the system was reoptimized. The epoxides were taken to be protonated, either on the oxygen or on the chlorine. Ring opening via monomolecular rupture of a C—O bond was found to occur significantly more readily when there is a —CH3 or —Cl substituent on the carbon. Epichlorohydrin is exceptional, in that stretching a C—O bond leads to a movement of the chlorine toward the carbon in question, forming a three- or four-membered ring. The stretching of protonated C—Cl bonds has remarkably low energy requirements, even when the carbon is not part of the epoxide ring. The interactions with ammonia produced intermediate complexes, which are particularly stable when there is a chlorine on the other ring carbon. The formation of the primary in vivo DNA alkylation product of vinyl chloride, suggested as being responsible for the carcinogenicity of the latter, is discussed. The most negative values of the electrostatic potentials near the oxygens of 21 different epoxides are listed and analyzed in terms of their relationship to the nature of the substituent on the epoxide ring. Also discussed are our earlier findings that epoxide carcinogenicity appears to be associated with a relatively strong negative potential near the oxygen, and that the abilities of epoxides to inhibit epoxide hydrase correlate well with this oxygen potential (modified by a parameter to take account of steric effects).
    Zusätzliches Material: 2 Tab.
    Materialart: Digitale Medien
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