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  • 1
    ISSN: 1573-4943
    Keywords: β-sheet ; circular dichroism ; concanavalin A ; conformation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The conformations of concanavalin A (con A), an all-β protein, and its three CNBr-cleaved fragments were studied by CD. Con A in buffer showed a 197 nm maximum and a 223 nm minimum, which were red-shifted by 6–7 nm from those of regular all-β proteins and β-sheet of (Lys) n . Fragment 1 (residue 1–42) resembled an unordered form with a CD maximum at 200 nm, but fragments 2 (residues 43–129) and 3 (residues 130–237) showed a regular CD spectrum with two extrema at 192–193 nm (+) and 214–216 nm (−). Equimolar mixture of the three fragments showed some degree of interaction, but did not reconstitute the conformation of native con A, probably because of the loss of bound Ca2+ and Mn2+ ions in the fragments. In ethanol-, methanol-, and dioxane-water mixed solvents, con A and its fragments remained as β-sheet. In contrast, addition of trifluoroethanol and sodium dodecyl sulfate induceda-helix at the expense of β-sheet for con A and its fragments in aqueous solution. In 80% trifluoroethanol, the induced helicities exceeded their sequence-predicted helix-potentials, but in 10 mM sodium dodecyl sulfate the helicities agreed well with corresponding predictions.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-4943
    Keywords: Opioid-binding proteins ; conformation ; circular dichroism ; sequence-predictive method
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Based on circular dichroism (CD) and the sequence-predictive method, the opioid-binding cell adhesion molecule (OBCAM) consisted of one half β-sheets and one fourth α-helices. This is consistent with significant sequence homology of the protein to several members of the immunoglobulin (Ig) superfamily, particularly cell adhesion molecules, which are rich in β-sheets. Hydropathy analysis suggests that hydrophobic and hydrophilic regions were evenly distributed along the sequence, but the NH2- and COOH-termini were hydrophobic. Hydrophobic moments and Fourier-transform amphipathic analyses further suggest that residues 23–30 and 83–93 were amphiphathie β-sheets. The overall conformation of OBCAM was unaltered by adding linoleic acid, which is required for opioid ligand binding.
    Type of Medium: Electronic Resource
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