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  • 1
    ISSN: 1432-1424
    Keywords: gramicidin channel ; temperature dependence ; single channel current histograms ; peptide libration mechanism ; nonlinear Arrhenius plots ; metastable states ; dynamic channel
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Summary A study of the temperature dependence of gramicidin A conductance of K+ in diphytanoyllecithin/n-decane membranes shows the plot of In (single channel conductance) as a function of reciprocal temperature to be nonlinear for the most probable set of conductance, states. These results are considered in terms of a series of barriers, of the dynamics of channel conformation,vis-a-vis the peptide libration mechanism, and of the effect of lipid viscosity on side chain motions again as affecting the energetics of peptide libration.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    The journal of membrane biology 89 (1986), S. 107-111 
    ISSN: 1432-1424
    Keywords: quadrupolar nuclear magnetic resonance ; rotational correlation times and off-rate constants ; potassium-39 NMR ; gramicidin channel transport ; ion transport specificity ; electrophysiology without electrodes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Summary A potassium-39 NMR study of potassium ion interaction with the gramicidin transmembrane channel in phospholipid bilayers at high ion activity is reported which allows determination of a weak binding constant, K b w ≃8.3/m, and an off-rate constant for the weak site,k off w ≃2.6×107/sec. These values are interpreted with the aid of additional NMR data as the binding constant for formation of the doubly occupied channel state and the rate constant for an ion leaving the doubly occupied state. Considering the singly occupied channel state for the potassium ion to be “electrically silent” at 1 molar ion activity, as with the sodium ion, the single-channel conductance for 100 mV and 30°C calculated to be 29 pS, and using the same approximation with previous NMR results on the sodium and rubidium ions, reasonable conductance ratios were calculated. Further experimental estimates of the other three constants with the experimental location of binding sites and Eyring rate theory to introduce voltage dependence allowed a more complete calculation of the two-site channel. The single-channel conductance for potassium ion is calculated to be 24 pS at 1m activity and 26 pS at 0.6m activity, which compares for diphytanoyl phosphatidylcholine membranes to an experimental most probable single-channel conductance of 25 pS and a mean channel conductance of 20 pS. The calculated conductance ratios using NMR-derived constants were γ(K)/γ(Na)=2.0 and γ(Rb)/γ(Na)=4.3. These results are close to the experimental values and provide further basis for the use of NMR of quadrupolar ions to provide information on the ionic mechanism of channel transport.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This article reports a continuation of our work on the substituent effects on the preferred helical conformations and the mutarotation of substituted poly(L-prolines). The size of the substituent has been increased from a methyl group to an ethyl group in the 5 position. The purpose is twofold: (i) according to our theoretical conformational energy calculations, an ethyl group in the 5 position can exert a greater steric effect than can a methyl group; and (ii) the rotation-isomerization of the ethyl group introduces a new intriguing fact to the problem. The cis isomer of 5-ethylproline was synthesized by catalytic hydrogenation of Δ′-2-ethylpyrroline-5-carboxylic acid, whereas for trans-5-ethylproline, a chemical separation method involving p-toluenesulfonyl chloride was used. The resolution of cis-5-ethylproline and the assignment of absolute configurations have been carried out by fractional crystallization and circular dichroism spectroscopic techniques, respectively. Poly(cis-5-ethyl-D-proline) was obtained from its corresponding N-carboxyanhydrides via a ring opening polymerization.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Chemistry Edition 21 (1983), S. 1751-1761 
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Two possible conformations for poly(cis-5-ethyl-D-proline) have been identified and characterized by using combinations of 1H- and 13C-NMR, CD, and ORD spectroscopic techniques. Both forms have helical conformations similar to those of poly(L-proline) characterized by different amide bonds (cis and trans). However, the carbonyl group of the amide in poly(cis-5-ethyl-D-proline) form II (trans) seems to be closer to perpendicular orientation with respect to the helical axis than in poly(L-proline) form II. The pyrrolidine ring conformation of form I (cis) is probably β+γ--puckered, whereas for form II it is probably β+-puckered in nature. The side-chain ethyl groups prefer to adopt anti conformations to the C5—H bond, or prefer to have χ = 180°, regardless which of the two forms poly(cis-5-ethyl-D-proline) may like to assume. The experimental results agree well with our previous theoretical conformational energy calculations.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Chemistry Edition 21 (1983), S. 1741-1749 
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The mutarotation between form I and form II of poly(cis-5-ethyl-D-proline) has been experimentally realized. A number of hydrogen-bond-forming solvents have been found effective in initiating the mutarotational process. The rate of mutarotation seems to be proportional to the acidity of the active solvent. The enthalpy of activation energy for the mutarotation is estimated from the first-order kinetics at the lower conversion by means of the Arrhenius equation to be approximately 16.7 kcal/mol. The solvent-polymer interactions are proven to be one of the important driving forces for the mutarotation. The specific site at which hydrogen bonding takes place has been determined to be the carbonyl group of the amide by infrared spectroscopic techniques. The molecular reason for the greater susceptibility of poly(cis-5-ethyl-L-proline) II to the solvent effect than poly(cis-5-ethyl-L-proline) I can be satisfactorily explained by the relatively more extended structure of form I than form II. The mechanism for the mutarotation undoubtedly involves a cis-trans isomerization of the amide bond. The conformation of the transient states during the mutarotational process is still evidently helical in nature, probably consisting of long poly(cis-5-ethylproline) I and II segments.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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