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  • 1
    ISSN: 1520-4804
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1432-0843
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary S 12363, a new vinca alkaloid derivative, was considerably more cytotoxic to murine L1210 cells and five human tumor cell lines (HL60, HT-29, COLO 320DM, NCI-H460, and PANC-1) than was vincristine (VCR) or vinblastine (VLB). S 12363 bound to tubulin in crude extracts from brain or L1210 cells with an affinity similar to that of VLB and VCR (apparentK d value: 1.1–1.6, 1.2–1.7, and 0.6–0.8 μM, respectively). After 1 h exposure, the accumulation of 20 nM [3H]-S 12363 by L1210 cells was 4-to 18-fold that of [3H]-VLB and [3H]-VCR, respectively. After the cells had been preloaded for 1 h with the labeled drugs and then incubated for 3 h in drug-free medium, 37%–55% of the [3H]-S 12363 was retained by the cells vs 36%–47% of the [3H]-VCR and 〈6% of the [3H]-VLB. Similar results were obtained for the five human cell lines tested. The accumulation factors (intracellular vs extracellular concentrations) found for [3H]-S 12363 (54- to 167-fold) were significantly higher than those observed for [3H]-VCR (5- to 14-fold) or [3H]-VLB (19- to 41-fold). 〉90% of the radioactivity extracted from L1210 cells that had been treated with [3H]-S 12363 was recovered as unmodified drug, demonstrating that [3H]-S 12363 was not metabolized by these cells. S 12362, which differs from S 12363 only in the absolute configuration of the asymmetric carbon atom of its α-aminophosphonic side chain, was 300 times less cytotoxie, bound to tubulin with a lower affinity (apparentK d value, 4.9–9.6 μm), and was neither accumulated nor retained by the cells. Taken together, these results demonstrate that the potency of S 12363 is due at least in part to its cellular accumulation and retention.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-501X
    Keywords: Metalloproteinase ; MMP-2 ; MMP-9 ; Zymography ; Peptide libraries
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary A fully automated peptide synthesizer was used to generate tetrapeptide sublibraries from 24 natural and nonnatural amino acids, from which new inhibitors of gelatinases (matrix metalloproteinases MMP-2 and MMP-9) were selected as potential anticancer drugs. MMP-2 and MMP-9 from mouse Balbc/3T3 fibroblasts conditioned media were assayed in their linear range response by zymography to quantify inhibition at each step of the tetrapeptide library deconvolution. The histidine-ɛ-amino caproic acid-βalanine-histidine (His-ɛAhx-βAla-His) sequence was found to yield optimal inhibition of both MMP-2 and MMP-9. Inhibition by selected tetrapeptides was also evaluated with two other techniques, a native type IV collagen degradation assay and a fluorogenic enzymatic assay, confirming the tetrapeptide potency. The His-ɛAhx-βAla-His tetrapeptide also inhibited purified human MMP-2 and MMP-9 and the corresponding enzymes present in conditioned media from human tumour cells. Finally, the length of the spacer between the two terminal histidines was found to be crucial to the inhibitory potential. This approach may thus be considered as a successful strategy to yield specific peptide or pseudopeptide inhibitors, although their potency remains moderate, since it was measured before any chemical optimization was undertaken.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1573-501X
    Keywords: analysis of libraries ; coupling of mixtures ; incomplete libraries ; peptide libraries ; positional scanning
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The standard method of peptide library synthesisinvolves coupling steps in which a single amino acidis reacted with a mixture of resin-bound amino acids.The more recently described positional scanningstrategy (in which each position in the peptide sequence is occupied in turn by a single residue) isdifferent since it involves the coupling of mixturesof amino acids to mixtures of resin-bound amino acids.In the present study, we analyze the compoundsproduced under these conditions measuring couplingrates and amounts of formed products, using mainly UV,HPLC, LC/MS and MS/MS techniques. Our data do notpermit to conclude that the resulting libraries arecomplete. Indeed, our analytical data indicate that alarge part of the di-, tri- and tetrapeptidessynthesized with this method are not present in thefinal mixture. Although chemical compensation (inwhich poor coupling kinetics is compensated by alarger excess of the incoming amino acid) has beenthought to counterbalance these biases, ourexperiments show that the compensation method does nottake into account the crucial influence of theresin-bound amino acid and that even the dipeptidelibraries obtained in this way are far fromcompleteness. The present work provides strong evidence that the coupling of mixtures of amino acidsto resin-bound residues, which is required by thepositional scanning strategy, results in incompleteand/or non-equimolar libraries. It also clearlyconfirms that coupling rates in solid-phase peptidesynthesis are dependent on the nature of both theincoming and the immobilized amino acid.
    Type of Medium: Electronic Resource
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