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  • 1
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 90 (1989), S. 3015-3032 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We report Soret enhanced resonance Raman studies of single crystals of metmyoglobin. Differing scattering intensities of the 345 cm−1 mode in solution and crystalline forms of the protein indicate a structural perturbation of the heme upon crystallization, possibly involving a propionate substituent of the heme. The immobilization of the heme in the crystal also allows observation of low-quantum-yield photoreduction of the heme that appears to be driven by Soret band absorption. We present experimental investigations of the orientational dependence of the intensity and polarization of several strong heme Raman modes along with calculations that explore the effects of vibrational mode symmetry and of differential coupling to x-, y-, and z-polarized electronic transitions. Orientation studies provide evidence that the vinyl C=C stretching band at 1622 cm−1 is a superposition of two independent modes that couple selectively to the x- and y-polarized Soret transitions. We also demonstrate how modes of nominal B1g and B2g symmetry can be distinguished by crystal studies. Modes that couple preferentially to charge transfer transitions polarized perpendicular to the heme plane are shown to be easily distinguishable from the majority of heme modes, which couple to the in-plane polarized Soret transition; we observe no modes of the former type in metmyoglobin. Finally, we present calculations showing that single-crystal polarization studies of resonance Raman scattering as a function of excitation frequency should be sensitive to the splitting of the nearly xy-degenerate Soret band as well as to the orientation of the x- and y-polarized transitions.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 97 (1992), S. 3214-3227 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We discuss the technique of resonance Raman saturation spectroscopy and present experimental results that probe relaxation processes in heme proteins following electronic excitation in the Soret band. The observable relaxation time scales are limited by the laser excitation rate kL rather than by the laser pulse width (∼10 ns). Analysis of the data using a theory that separates the electronic and vibrational relaxation leads to electronic ground state recovery times τ=6.4±2.0 ps for ferrocytochrome c, τ=4.8±1.5 ps for deoxymyoglobin, and τ=2.0±0.7 ps for deoxyhemoglobin. The Raman depolarization ratio is predicted to increase at high laser flux, due to the preparation of a partially oriented sample by photoselective excitation. Such effects are observed in heme systems and the relaxation times extracted from the depolarization analysis are in good agreement with those derived from measurements of Raman intensity saturation. Studies of the asymmetric broadening of the ν4 mode of cytochrome c at high laser flux reveal that the line shapes in the Stokes and anti-Stokes region are inequivalent.Time-reversal symmetry dictates that this broadening is due to an underlying Raman band associated with an excited electronic state that is populated at high laser flux. Similar line broadening effects, observed in hemoglobin and myoglobin samples, are also shown to arise from Raman scattering of excited electronic states rather than Rabi broadening [Alden et al., J. Phys. Chem. 94, 85 (1990)] or anharmonic coupling to vibrationally hot low frequency modes [Petrich et al., Biochemistry 26, 7914 (1987)]. Quantitative analysis of Stokes and anti-Stokes Raman scattering determines the heme vibrational temperature as a function of laser flux and leads to a description of the Raman intensities that differs significantly from that of Lingle et al. [J. Phys. Chem. 95, 9320 (1991)], which ignores electronic saturation effects and is based on the scattering properties of a two-level system. For cytochrome c, we use a simple thermal transport model to extract a value for the product of the heme area and the coefficient of surface heat transfer between the heme and the surrounding protein. This leads to a ∼4 ps time constant for the short-time exponential phase of heme cooling.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 90 (1989), S. 5982-5993 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We have measured the resonance Raman cross sections of the predominant modes of ferrocytochrome c as a function of temperature. The data are fit quite successfully with a Kramers–Kronig transform technique and a first-order resonance Raman cross-section expression, which explicitly separates effects due to the thermal properties of the absorption line shape from the Bose–Einstein factor of the Raman mode. The results give experimental support to the assumption that corrections due to higher order scattering processes are negligible for systems that contain many weakly coupled thermally populated modes and verify approximate theoretical expressions for the resonance Raman cross sections at finite temperature. The results also demonstrate that higher order scattering processes cannot account for the recently observed anomalous enhancement of the resonance Rayleigh cross section of ferrocytochrome c. Finally, transient resonance Raman experiments that probe the local temperature of the heme group are suggested and the method of analysis is discussed. These experiments are considered in light of recent molecular dynamics calculations that predict photon absorption will lead to a significant increase in the heme temperature that dissipates within 40 ps. We present expressions, appropriate for absorbing media, that suggest how the mode selective temperature of the heme group can be directly measured by use of the resonant Stokes and anti-Stokes scattering cross sections. Calculations, specific to hot transient states of myoglobin, are presented in order to help quantify the analysis of recent subpicosecond resonance Raman measurements. Recent applications of anharmonic exchange models to obtain heme temperatures are shown to be inappropriate when kT(approximately-greater-than)(h-dash-bar)Ωb.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Biochemistry 25 (1986), S. 2374-2378 
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 106 (1984), S. 5688-5698 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    The @journal of physical chemistry 〈Washington, DC〉 88 (1984), S. 6693-6696 
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    The @journal of physical chemistry 〈Washington, DC〉 98 (1994), S. 6644-6651 
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    The @journal of physical chemistry 〈Washington, DC〉 95 (1991), S. 3391-3398 
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 87 (1987), S. 4273-4284 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We have measured the resonance Raman excitation profiles (REP's) of several vibrational modes associated with the heme active site of cytochrome P450cam. The important Fe–S axial ligand mode (351 cm−1) of the substrate bound (high-spin ferric) complex is found to have structure in its blue shifted REP. Inverse transform techniques allow the line shape of the resonant charge transfer absorption to be reconstructed directly from the REP data. The observed splitting (3200 cm−1) is associated with an inequivalence in the resonant S→Fe charge transfer excitations. The position of the high-energy component (∼323 nm) is found to be in excellent agreement with z-polarized single crystal measurements, while the low-energy component (∼360 nm) is not clearly observed in the single crystal analysis. The "spin-marker'' band ν3 is found to have a REP that is significantly red shifted with respect to the theoretical predictions. A variety of perturbations including non-Condon and multiple state coupling, as well as state dependent damping, are unable to account for the observed red shift. Studies of other ferric heme protein systems, including substrate free cytochrome P450cam (low-spin) and aquomet myoglobin (high-spin) reveal "normal'' behavior of their REP's. The electron–nuclear coupling strengths are directly extracted from the measured absolute cross sections in these cases.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Biochemistry 14 (1975), S. 4151-4158 
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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