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  • 1
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Science Inc
    The @journal of eukaryotic microbiology 52 (2005), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Estimates of protist biodiversity and distribution have until recently relied on the morphological identification of individual cells. The advent of environmental-DNA-based surveys of these protist communities has broadened our understanding of species richness and diversity. A “total-evidence biodiversity” approach gives two benefits. First, it allows “back-comparison” to previous studies of ecosystems, permitting estimates of the amount of cryptic diversity in different sampling regimes (and by extension, the fossil record). Second, it will provide the best possible estimate of the total species richness of current study sites. Here, we use a well-studied benthic protist community, the foraminiferal assemblage of McMurdo Sound, Antarctica, to determine the effective parameters of both detection methods. We find that molecular-based techniques detect well-characterized calcareous species at depths too great to allow calcification, suggesting that these forms may be able to survive without their distinctive tests. “Fragile” taxa also appear to be better represented in molecular surveys than in morphological ones. The strengths of a combined morphological–molecular approach are demonstrated by an assessment of the distribution of two species in the genus Notodendrodes; morphological detection excels in the identification of distinctive, patchily distributed adults, whereas molecular detection with taxon-specific probes enabled identification in less favorable sampling conditions. Such a “broad-plus-deep” approach appears to maximize detection efficiency in this Antarctic setting.Work supported by NSF OPP0003639.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 51 (2004), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Studies of benthic Foraminifera typically rely on the morphological identification of dried specimens. This approach can introduce sampling bias against small, delicate, or morphologically ambiguous forms. To overcome this limitation, we extracted total DNA from sediment followed by PCR using group- and species-specific primers. Phylogenetic analyses revealed that approximately ninety percent of the PCR products represented previously undescribed sequence types that group with undersampled members of the allogromiid Foraminifera. We also used a modification of this technique to track individual species in sediment fractions too fine for normal morphological identification, and to confirm species placement of morphologically ambiguous foraminiferans. We were able to identify the DNA of several large foraminiferal species in fine fractions in a seasonally-dependent manner, indicating that in some seasons the majority of the standing stock of these species exists as gametes/juveniles. The approach outlined here represents a powerful strategy for exploring the total diversity of benthic foraminiferal communities.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature 380 (1996), S. 544-547 
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] One class of human complementary DNA clones identified in a yeast two-hybrid screen for proteins interacting with NIMA encoded Pinl, a protein of relative molecular mass (Mr) 18,245 (Fig. la). Northern blotting showed a single 1.0-kilobase (kb) PIN1 messenger RNA in all human cell lines ...
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Yeast 5 (1989), S. 55-72 
    ISSN: 0749-503X
    Keywords: Gene disruption ; genetic mapping ; nonsense suppression ; multibudded phenotype ; Life and Medical Sciences ; Genetics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology
    Notes: A newly isolated gene, ESS1, was shown to encode a protein required for vegetative growth in Saccharomyces cerevisiae. The nucleotide sequence of ESS1 revealed a 172 amino acid open reading frame predicting a highly basic, 19·5 kilodalton product. Although the gene was isolated by cross-hybridization with the vertebrate v-sis oncogene, the primary amino acid sequence bears only a slight resemblance to the p28sis protein. ESS1 was shown to be single copy in the yeast genome and transcriptionally active during logarithmic growth. It is located on the right arm of chromosome X, 6 centimorgans distal to ilv3. The genetic map location indicates it is not allelic to any previously characterized mutation in this organism. Both inactivation of ESS1 by gene disruption and overexpression by fusion to a heterologous promoter were detrimental to growth in both haploid and diploid cell types. Under non-permissive conditions, the terminal phenotype of strains containing a suppressible amber mutation within ESS1 was one of aberrant multibudded structures. Examination of this morphology indicates that loss of ESS1 function may lead to a defect in cytokinesis or cell separation.
    Additional Material: 7 Ill.
    Type of Medium: Electronic Resource
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