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  • 1
    ISSN: 1617-4623
    Keywords: Multifunctional enzyme ; Cluster gene ; Nucleotide sequence ; Yeast transformation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary FAS1, the structural gene of the pentafunctional fatty acid synthetase subunit β in Saccharomyces cerevisiae has been sequenced. Its reading frame represents an intronfree nucleotide sequence of 5,535 base pairs, corresponding to a protein of 1,845 amino acids with a molecular weight of 205,130 daltons. In addition to the coding sequence, 1,468 base pairs of its 5′-flanking region were determined. S1 nuclease mapping revealed two transcriptional initiation sites, 5 and 36 base pairs upstream of the translational start codon. Within the flanking sequences two TATATAAA boxes, several A-rich and T-rich blocks and a TAG-...TATGTT...TATGTT...TTT sequence were found and are discussed as transcriptional initiation and termination signals, respectively. The order of catalytic domains in the cluster gene was established by complementation of defined fas1 mutants with overlapping FAS1 subclones. Acetyl transferase (amino acids 1–468) is located proximal to the N-terminus of subunit β, followed by the enoyl reductase (amino acids 480–858), the dehydratase (amino acids 1,134–1,615) and the malonyl/palmityl transferase (amino acids 1,616–1,845) domains. One major inter-domain region of about 276 amino acids with so far unknown function was found between the enoyl reductase and dehydratase domains. The substrate-binding serine residues of acetyl, malonyl and palmityl transferases were identified within the corresponding domains. Significant sequence homologies exist between the acyl transferase active sites of yeast and animal fatty acid synthetases. Similarly, a putative sequence of the enoyl reductase active site was identified.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 0173-0835
    Keywords: Stripping ; Chemiluminescence ; Alkaline phosphatase ; Nonradioactive blotting ; Peroxidase ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: The application of nonradioactive RNA probes for Northern blotting offers the advantage of a rapid turn-around time for results without the loss of sensitivity for target mRNA detection. However, a problem that has impeded the widespread use of nonradioactive RNA probes for use in Northern blotting is the difficulty in stripping these probes from nylon membranes after hybridization. In this report we describe two protocols for stripping digoxigenin (Dig)-labeled RNA probes from nylon membranes. One protocol utilizes a phosphate-buffered formamide stripping solution to remove nonchemically modified (regular) RNA probes while the other method utilizes strippable probes that were produced with a chemically modified nucleotide (CTP) and removed by a specific stripping solution. This latter method was developed by Ambion Inc. and is called Strip-EZ™. We also describe a protocol for the detection of two separate rat mRNAs using both biotin and digoxigenin-labeled RNA probes that does not require stripping the membrane after hybridization. Finally, we describe the use of another new labeling technology, called ChemLink™, that quickly and conveniently labels RNA for use in Northern blotting.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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