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  • 1
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 106 (1997), S. 5102-5108 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: In order to determine the lowest energy isomer of the hydroperoxyl radical dimer, H2O4, ab initio quantum mechanical methods were employed to predict the geometrical structures, relative energies, harmonic vibrational frequencies, and associated IR intensities of both open chain and cyclic isomers. Two minima were located on the open chain potential energy surface, one of C2 symmetry and one of C1 symmetry. The relative energies of the different H2O4 structures vary strongly with level of theory. The most reliable treatment used in the present study predicted that the global minimum is the closed-shell C1 chain isomer which is lower in energy than the planar C2h triplet cyclic isomer by 1.6 kcal mol−1 including zero point vibrational energy corrections. It is argued that both structures should be observable, depending on the method of preparation. © 1997 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 104 (1996), S. 3676-3683 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: A quantum mechanical study of the phosphorus fluorides and their singly charged anions was carried out. A range of density functional methods was used. Optimized geometries, adiabatic electron affinities, vertical electron affinities, vertical detachment energies, and stabilities toward the loss of a single fluorine atom or fluorine ion are reported. These properties were evaluated exhaustively using four exchange-correlation functionals: Becke's 1988 exchange functional with the correlation functional of Lee, Yang, and Parr, Becke's 1988 exchange functional with the 1986 correlation functional of Perdew, Becke's three parameter Hartree–Fock/density functional hybrid exchange functional with the correlation functional of Lee, Yang, and Parr and Becke's half-and-half Hartree–Fock/density functional hybrid exchange functional with the correlation functional of Lee, Yang, and Parr (BHLYP). These exchange-correlation functionals were used in conjunction with a double-ζ plus polarization basis and a double-ζ plus polarization basis set which was augmented with an even tempered set of s and p diffuse functions. Less complete examinations of the local spin density approximation, Becke's 1988 exchange functional with the 1991 correlation functional of Perdew and Wang are also reported.Results were compared to the limited experimental data to see which combination of functional and basis set, if any, reproduced known results and could be expected to make accurate predictions where experimental data is absent. This comparison shows that the BHLYP exchange-correlation functional reproduces the known experimental geometrical parameters quite well. From work on related systems, the BHLYP method appears to predict the most reliable molecular electron affinities. With the double-ζ plus polarization basis set augmented with s and p diffuse functions, the predicted BHLYP adiabatic electron affinities are 0.71 eV (PF), 0.75 eV (PF2), 0 (PF3), 3.17 eV (PF4), and 1.25 eV (PF5). These theoretical electron affinities are expected to lie somewhat above the true values. The PF6 molecule is predicted to be dissociative with respect to PF5 and F, but PF−6 is significantly bound with respect to either PF5+F− or PF−5+F. © 1996 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 104 (1996), S. 3672-3675 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Ab initio studies of the aluminum monocarbonyl species AlCO and AlOC have been performed to predict the geometries, fragmentation energies, and harmonic vibrational frequencies. Both species were optimized at the self-consistent field, configuration interaction, and coupled-cluster levels of theory with large basis sets. At the highest level of theory, AlCO was found to be 22 kcal/mol more stable than the isocarbonyl, AlOC. Al–CO was found to have a dissociation energy of 9 kcal/mol, with no barrier to dissociation to Al and CO fragments. Al–OC was found to have a dissociation energy of −13 kcal/mol with an energy barrier to dissociation of less than 5 kcal/mol. The dipole moment of AlCO is found to be small (around 0.1 D), while that of AlOC is significantly larger (around 2.8 D). The C–O harmonic vibrational frequencies were evaluated at all levels of theory. For AlCO at the highest level of theory, the C–O frequency was 1914 cm−1 compared to the experimental value of 1868 cm−1, a 2.5% difference which may be attributed largely to anharmonic effects. The C–O frequency for AlOC is remarkably close to a tentative and disputed experimental spectral feature. © 1996 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 100 (1994), S. 8132-8139 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Benchmark studies of H6, H+7, and H+5⋅He were initiated in order to develop more efficient theoretical methods for describing the electron correlation energy, due to the relative ease with which the full configuration interaction (full CI) results could be obtained for these six-electron systems. Single-point energies which approach the quality of the full CI results are reported for a variety of coupled-cluster (CC) and configuration interaction (CI) methods using optimized basis sets and full CI optimized geometries. Emphasis is placed on multireference CI (MRCI) methods. By carefully limiting the configurations included in the CI and by using CI natural orbitals, we find it possible to reduce the number of configuration state functions (CSFs) by two orders of magnitude or more with little loss in the correlation energy recovered for the six-electron systems studied here. To judge the applicability of the MRCI methods to the study of potential energy surfaces, the energies of H2O at three geometries are compared to previously published full CI and complete active space self-consistent-field (CASSCF) second-order CI (SOCI) results. Finally, we propose a compact MRCI wave function incorporating limited triple and quadruple excitations. Indirect tests suggest that this new approach should be highly effective.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 106 (1997), S. 7178-7184 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Ab initio studies of dinitrogen tetroxide (N2O4) have been performed to predict the equilibrium geometry, harmonic vibrational frequencies, and fragmentation energy (N2O4→2 NO2). The structure was optimized at the self-consistent field, configuration interaction, and coupled-cluster levels of theory with large basis sets. At the highest level of theory, the N–N bond distance was 1.752 Å, in excellent agreement with the experimental value of 1.756±0.01 Å. In addition, the harmonic vibrational frequencies were predicted with an average absolute error of 51 cm−1 relative to experimental fundamental values with differences largely attributed to anharmonic effects. The fragmentation energy corrected for zero point vibrational energy and basis set superposition error was 7.2 kcal/mol, in fair agreement with the experimental value of 12.7 kcal/mol. Despite the suggestion that a multireference wavefunction may be necessary to accurately describe the biradical nature of N2O4, single reference treatments with large basis sets and high levels of electron correlation yield molecular parameters remarkably close to experimental values.© 1997 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 115 (1993), S. 1039-1047 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 112 (2000), S. 6779-6786 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We have applied electronic structure methods to the calculation of transition state parameters for the O(1)→O(4) proton transfer in H-Y zeolite. We arrive at a set of recommendations for calculating these transition state parameters accurately and efficiently. Density functional theory using the B3LYP functional and basis sets of triple-ζ quality in the valence space, and including polarization functions on all atoms, is the most efficient method for converging structures and vibrational frequencies. For converging classical barrier heights, we find it necessary to augment MP2 barrier heights calculated using large basis sets with MP4 energies obtained in more limited basis sets. We obtain an O(1)→O(4) barrier height of 86.1 kJ mol−1, and find the curvature of the barrier at the transition state to be 1570 cm−1. Including long range effects from the work of Sauer et al. [ACS Symp. Ser. 721, 358 (1999)] results in a higher barrier, which we estimate to be 97.1 kJ mol−1. We attribute the fact that our barriers are significantly larger than those reported in the experimental literature to the neglect of tunneling in the interpretation of experimental data. © 2000 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 112 (2000), S. 6787-6794 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We have developed a novel semiclassical transition state theory (SC-TST) for truncated parabolic barriers, based on the formulation of Hernandez and Miller [Chem. Phys. Lett. 214, 129 (1993)]. Our SC-TST rate coefficient has the form kSC-TST=kTST⋅Γ, where Γ depends on the zero point corrected barrier, ΔE0, and the barrier curvature, |ωF
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Oxford UK : Blackwell Science Ltd
    Alimentary pharmacology & therapeutics 15 (2001), S. 0 
    ISSN: 1365-2036
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Medicine
    Notes: Gastrimmune is an immunogenic form of gastrin. It raises in situ antibodies against two proliferative forms of gastrin: amidated and glycine-extended gastrin-17. It has been shown to have a therapeutic action in several in vivo tumour models. Following immunization, due to the complex equilibrium that exists between the antibodies and gastrin, it is not technically feasible to assay for free gastrin.〈section xml:id="abs1-2"〉〈title type="main"〉Aim:To determine the effect of Gastrimmune-induced antigastrin antibodies on acid secretion.〈section xml:id="abs1-3"〉〈title type="main"〉Method:A rat gastric fistula model was used. Animals (six per group) were immunized with a control immunogen or ascending doses of Gastrimmune. Acid output was measured following infusion of increasing doses of gastrin-17 and pentagastrin.〈section xml:id="abs1-4"〉〈title type="main"〉Results:Gastrimmune-induced antibodies significantly reduced gastrin-17-stimulated acid output compared to control animals (Gastrimmune at 200 μg/rat vs. control; acid output following 30 ng gastrin-17, 0.01 vs. 0.16, P 〈 0.001; following 120 ng gastrin-17, 0.022 vs. 0.29, P 〈 0.001).〈section xml:id="abs1-5"〉〈title type="main"〉Conclusions:Gastrimmune significantly inhibits gastrin-17-stimulated acid output. This biological assay suggests that the antigastrin antibodies effectively bind gastrin-17. In addition to its use as an antineoplastic agent, Gastrimmune may have a role as an acid-decreasing agent in oesophagogastric pathology.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] From the standpoints of both basic research and biotechnology, there is considerable interest in reaching a clearer understanding of the diversity of biological mechanisms employed during lignocellulose degradation. Globally, termites are an extremely successful group of wood-degrading ...
    Type of Medium: Electronic Resource
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