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  • 1
    ISSN: 1546-1718
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Chemical genomics involves generating large collections of small molecules and using them to modulate cellular states. Despite recent progress in the systematic synthesis of structurally diverse compounds, their use in screens of cellular circuitry is still an ad hoc process. Here, we outline a ...
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-4943
    Keywords: Human alpha apohemoglobin ; subunit assembly ; structural flexibility ; fluorescence energy transfer ; fluorescence quenching
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract A single energy transfer distance, between the sole intrinsic tryptophanyl donor [14 (A12)] and a nonfluorescent sulfhydryl acceptor probe (4-phenylazophenylmaleimide, PAPM) attached to the only cysteine [104 (G11)], has been employed to examine the effect of subunit assembly on the structure of the heme-free humanα-hemoglobin. Efficiencies of energy transfer were measured in 0.05 M potassium phosphate buffer,pH 7.0, at 5°C, and the structural flexibility ofα-apohemoglobin, in the absence and presence of humanβ-heme-containing chains, was examined by a steady-state solute quenching technique. The quenched efficiencies (E O) and Förster distances (R 0 O ) were analyzed by least-squares to determine the goodness of fit (χ R 2 ) for the assumed distribution parameters: average distance ¯r and half-widthhw. Data forα-apohemoglobin in the absence and presence ofβ h chains yielded values for ¯r of 18 and 22 Å andhw of 20 and 8.5 Å, respectively. Although the increase in ¯r forα-apohemoglobin in the presence ofβ h chains was presumably a consequence of additional quenching from the heme moiety, the change in the half-width strongly indicated a decrease in the flexibility of theα-apohemoglobin chain within the assembled protein. A transition in structural flexibility similar to that demonstrated here may be an important aspect of human hemoglobin assembly.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    The protein journal 13 (1994), S. 585-590 
    ISSN: 1573-4943
    Keywords: Human beta apohemoglobin ; sickle beta apohemoglobin ; self-association ; fluorescence quenching ; dimer-monomer
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The acrylamide quenching of the intrinsic tryptophanyl fluorescence of normal and sickleβ apohemoglobins has been studied in 0.05 M potassium phosphate buffer,pH 7.5, at 5°C over a protein concentration range from 1 to 50μM. Analysis of quenching dynamics revealed a strong dependence on acrylamide concentration for the intrinsic fluorescence of both normal and sickleβ apohemoglobins, suggesting that one tryptophanyl residue [presumably that at position 37(C3)], was more accessible to collisional quencher than the otherβ tryptophanyl residue [15(A12)]. Additional studies, which altered viscosity and subunit assembly experimental parameters, supported the assignment of residue 37 as the more dynamically accessible residue. Finally, the quenching data were also found to be dependent on protein concentration, implying that this difference in the mobility between the two residues is a sensitive probe of self-aggregation. Extrapolated dynamic quenching constants at low concentration of acrylamide were used to estimate the dimer-monomer equilibrium dissociation constants of normal and sickleβ apohemoglobins, and were found to be 5.6 and 2.4μM, respectively, thus demonstrating distinct self-association properties ofβ A andβ S apohemoglobins.
    Type of Medium: Electronic Resource
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