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  • 1
    ISSN: 1546-1718
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Sir — Closely related (confamilial) genera often retain large chromosomal tracts in which gene order is co linear, punctuated by structural mutations such as inversions and translocations1. To explore the possibility that conservation of gene order might extrapolate to more distantly related ...
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Biochemical genetics 24 (1986), S. 813-819 
    ISSN: 1573-4927
    Keywords: Sorghum ; malate dehydrogenase ; isozymes ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Malate dehydrogenase (MDH) isozymes extracted from dark-grown seedlings ofSorghum species are encoded by at least two genes with their products localized in the mitochondria (mt) and one gene with its products localized in the cytosol. In homozygous genotypes, the three mt-MDH isozymes represent two homodimers and an intergenic heterodimer. For some plants ofS. virgatum andS. aethiopicum, the three mt-MDH isozymes migrate about 3 mm faster (more anodally) when electrophoresed on starch gels. The F1's of plants with normal and fast mt-MDHs had normal migration; the F2's segregate 3:1 for normal to fast migration. It is suggested that a single gene,Mmm (mt-MDH modifier), controls this modification of normal migration and that fast migration occurs when the recessive allele(mmm-m) is homozygous. The designation,Mmm, is borrowed fromZea mays, in which a similar gene has been described.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-5028
    Keywords: CMS (cytoplasmic nuclear male sterility) ; plastid gene transcription ; pollen ; rpoC2 ; sorghum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A 165 bp deletion in the middle of rpoC2, the plastid gene which encodes the RNA polymerase β″ subunit, was identified in the small-anthered types of CMS sorghum, Sorghum bicolor (L.). Moench, containing A1, A2, A5, and A6 cytoplasms. It was previously shown that the amino acid sequence deleted in these CMS lines is in a monocot-specific region that contains several protein motifs that are characteristic of several transcription factors. Using primers flanking the deletion in PCR analyses, various types of CMS lines, some of which are used in hybrid sorghum production, were classified into two groups. CMS lines containing A1, A2, A5, A6 cytoplasms display the deletion in rpoC2. These lines have small anthers in which pollen development is arrested at an early stage and in which usually only empty exines are found. CMS lines containing A3, A4, and 9E cytoplasms do not possess the deletion. These lines have large anthers in which pollen degenerates at a later stage. Run-on transcription assays using 15 chloroplast genes showed that chloroplast gene transcription rates are similar in CMS and fertile (maintainer and restorer) lines and F1 in seedling leaves. Analyses of RNA blots indicated that rbcL, rpoB and rpoC2 transcripts are accumulated mainly in the leaves and low in the inflorescence tissues and pollen. These data document plastid gene expression in leaves and non-photosynthetic tissues from CMS and fertile lines of sorghum.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1572-9788
    Keywords: BAC ; positional cloning ; Sorghum propinquum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A large insert Sorghum propinquum BAC library has been constructed to analyze the physical organization of the sorghum genome and to facilitate positional cloning of sorghum genes and QTLs associated with the early stages of grain crop domestication. This library was established from 12 different ligations using high-molecular-weight DNA generated from either one cycle or two cycles of size selection. This library consists of 38 016 BAC clones with an estimated average insert size of 126 kb and coverage of 6.6 genome equivalents. The 6.6 genome-equivalent BAC library of S. propinquum provides a 99.7% probability of finding one or more BACs that contain genes of interest. Twenty mapped DNA probes, ten homologous and ten heterologous, were used to screen the library, and 121 positive clones were identified, 6.05 per locus or 6.37 per probe.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1617-4623
    Keywords: Chloroplast ; RNA polymerase ; Deletion ; Cytoplasmic male sterility ; Sorghum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Fertile lines of sorghum (Sorghum bicolor) were shown to differ from cytoplasmic male sterile (CMS) lines by the presence of a 3.8 kb HindIII chloroplast DNA fragment in the former and a smaller (3.7 kb) fragment in the latter. DNA/DNA hybridization studies showed that these two fragments are homologous. Fertile plants from S. versicolor, S. almum, S. halepense, and Sorghastrum nutans (Yellow Indiangrass) also have the 3.8 kb fragment, and CMS lines studied containing A1, A2 and A3 cytoplasms have the 3.7 kb fragment. The size difference between the two fragments was localized to a 1.0 kb SacI-HindIII fragment by restriction mapping. A r65 by deletion, which is flanked by a 51 by tandem repeat, was identified in the CMS lines by sequencing the clones. Comparison of the two sequences with those from maize, rice, tobacco, spinach, pea, and liverwort revealed that the deleted sequence is located in the middle of the RNA polymerase β″ subunit encoded by the gene rpoC2. The amino acid sequence deleted in the CMS lines is in a monocot-specific region which contains two protein motifs that are characteristic of several transcriptional activation factors, namely, a leucine zipper motif and an acidic domain capable of forming an amphipathic α-helix. Further studies designed to determine whether or not the deletion is involved in CMS of sorghum are underway.
    Type of Medium: Electronic Resource
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