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  • 1
    ISSN: 1520-6890
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    The @journal of physical chemistry 〈Washington, DC〉 98 (1994), S. 5653-5660 
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 98 (1993), S. 5694-5700 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We perform a molecular dynamics simulation of the hexagonal solid phase of water, using a new polarizable and flexible potential which has been derived from quantum mechanical calculations. We calculate and compare with available experimental data the molecular structure, the density of states in the translational, librational, and vibrational regions as well as the acoustic dispersion relations. The molecular structure in the condensed phase is found to be in agreement with the recent interpretation of the neutron scattering data of Kuhs and Lehmann [W. F. Kuhs and M. S. Lehmann, J. Phys. (Paris) 48, C1, 3 (1987)]. The collective low frequency modes in the simulated ice are in good agreement with the experimental data in the c-axis direction but 20% softer in the hexagonal plane.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 98 (1993), S. 4984-4990 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Molecular dynamic simulations for liquid H2O and D2O are reported in the temperature range 238–368 K. We have used the NCC–vib interaction potential, which is obtained from ab initio data, allows vibrations and includes explicitly polarizability. We report on the translational and rotational velocity autocorrelation functions and on the density of states in the range 0–4500 cm−1. Special attention is given to the computation of the translational, librational, bending, stretching and overtones spectra comparing liquid H2O with D2O, temperature dependences, and the positions of the simulated spectra with those from infrared, Raman and neutron scattering experiments. The overall agreement is satisfactory; minor discrepancies in the bending and stretching frequency positions have suggested improvements for the interaction potential.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 98 (1993), S. 2241-2249 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We have analyzed the molecular-dynamics (MD) trajectories for the oxygen and hydrogen atoms of liquid water, at six temperatures (from hot, T=361 K, to supercooled water, T=242 K); in the MD simulations the Nieser-Corongiu-Clementi ab initio potential has been used, since it yields reliable x-ray and neutron-diffraction data as well as infrared, Raman, and neutron-scattering spectra. Our analysis leads to two complementary models where we can consider each water as a solvated molecule (placed at the center of a solvation shell) or as a component of a cyclic polymer, a substructure of the hydrogen-bonded network. In the first solvation shell all water molecules are solvated with coordination values in the range 2–8. The most probable solvation number is four, at low temperature, and five at high temperature considering oxygen–oxygen pairs; however, the coordination number is four at all the temperatures if we consider oxygen–hydrogen pairs. The lifetime of the tetra coordinated complexes is the largest one and increases as temperature decreases. The computed population of cyclic polymers is highest for the pentameters in the studied temperature range, the second most probable cyclic structure is for hexamers. The average O–O distances in the liquid are temperature dependent and shorter than those in the gas phase, approaching ice values at low temperature (except for cyclic trimers, for which the O–O distance is nearly temperature independent). As a preliminary result, the lifetime of the polygons is estimated to be around 0.01 ps.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 97 (1992), S. 8818-8818 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 97 (1992), S. 2030-2038 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Molecular dynamics simulations with the "Nieser–Corongiu–Clementi flexible water molecules'' (NCC-vib) ab initio potential are reported at a number of temperatures ranging from 242 to 361 K for H2O and from 238 to 368 K for D2O. Each simulation has been carried out, after equilibration, for 12 ps; the computed trajectories have been used to study structural properties as a function of the temperature. Water geometry in the liquid, pair correlation functions, coordination numbers, x-ray and neutron scattering structure functions are compared with available experiments. The overall agreement is quite satisfactory, validating the reliability of the NCC-vib interaction potential. Concerning the pair correlation [gαβ(r,T)] and the neutron scattering structure functions, our simulation validates more Soper et al. [Chem. Phys. 107 (1986)] than Thiessen et al. [J. Chem. Phys. 77 (1982)] data. Plots of the Δgαβ(r,ΔT) and of the temperature variations in the coordination numbers are favorably compared with the experimental findings by Bosio et al. [Phys. Rev. A 27 (1983)]. Temperature dependent shifts in peak position and intensity of x-ray and neutron structural functions are in excellent agreement with the experimental finding of Bosio et al. [Phys. Rev. A 27 (1983)] and Chen et al. [Adv. Chem. Phys. 64 (1988)]. These simulations point out that for liquid water, in the temperature range ∼238 to 368 K, at the density of 0.997 g/cm3, the NOO oxygen coordination number grows, with a well defined transition, from 4 to 5 while the NOH decreases from 5 to 4.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Annals of the New York Academy of Sciences 367 (1981), S. 0 
    ISSN: 1749-6632
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Natural Sciences in General
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Journal of biological physics 11 (1983), S. 33-42 
    ISSN: 1573-0689
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Physics
    Notes: Abstract The position and orientation of water molecules hydrating fragments of DNA in the B and Z conformations are analyzed with the help of computer simulations. Monte Carlo studies are carried out at room temperature, high relative humidity (500 water molecules per pitch) and in the presence of counterions such as Li+, Na+, and K+. Differences in hydration patterns and in the counterionic structures were found by compairing B-DNA with Z-DNA double helices and B-DNA helices with different base-pair distributions. The present extension of our similations to Z-DNA and to Li+ and K+ counterions permits some general conclusions concerning nucleic acids in solution.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 26 (1984), S. 131-140 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Dissociation reactions of NaCl into the ionic and the neutral atomic states and the interactions Na+-Na+ and Cl--Cl- of the like ions are investigated quantum mechanically at the configuration interaction level of approximation. Data including the calculated total equilibrium energies, dissociation energies, and bond distances are reported together with the tabulated interaction energies at a wide range of nuclear separations.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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