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  • 1
    ISSN: 1432-1424
    Keywords: Water pore sizes ; Water channels ; Reflection coefficients ; Selectivity filters ; Proximal kidney tubule ; Single file transport
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Proximal straight tubules (PST) were dissected from rabbit kidneys, held by crimping pipettes in a chamber and bathed in a buffered isosmotic (295 mOsm/kg) solution containing 200 mm mannitol (MBS). Changes in tubule diameter were monitored on line with an inverted microscope, TV camera and image processor. The PST were then challenged for 20 sec with MBS made 35 mOsm/kg hyperosmotic by addition of either NaCl, KCl, mannitol (M), glycerol (G), ethylene glycol (E), glycine (g), urea (U), acetamide (A) or formamide (F). With NaCl, KCl, M, G, E, g, U, and A, tubules shrunk osmometrically within 0.5 sec and remained shrunk for as long as 20 sec without recovering their original volume (sometimes A showed some recovery). PST barely shrunk with F and quickly recovered their original volume. The permeability coefficients were 0 μm/sec (NaCl, M, g, E and U), 1 μm/sec (A), 84 μm/sec (F) and 0.02 μm/sec (G). The reflection coefficients σ = 1.0 (NaCl, KCl, M, G, E, g and U), 0.95 (A) and 0.62 (F). Similar σ values were obtained by substituting 200 mOsm/kg M in MBS by either NaCl, KCl, G, E, g, U, a or F. The olive oil/water partition coefficients are 5 (M), 15 (U), 85 (A) and 75 (F) (all x10−5). Thus, part of F permeates the cell membrane through the lipid bilayer. The probing molecules van der Waals diameters are 7.4×8.2×12.0 (M), 3.6×5.2×5.4 (U), 3.8×5.2 ×5.4 (A) and (3.4×4.5×5.4 (F) Å. We conclude that only F clearly permeates the water channel (WCH). Water molecules must single file within the WCH. After subtraction of the bilayer permeability of the probes, we estimate for the WCH selectivity filter cross-section a diameter of 4.2–4.7 Å (if it is circular) and 3.6×4.2 Å (if it is rectangular). But if the oxygens facing the WCH lumen H bond with the molecules crossing the WCH, the WCH selectivity filter would be 3.3–3.8 Å (circular) and 3.6×4.0 Å (rectangular).
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1617-4623
    Keywords: Key words Mitochondria ; Processed pseudogenes ; Human Tom20 gene ; Import receptor ; Retroposons
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We report the identification and characterization of Ψ3Tom20, a novel processed pseudogene of the human Tom20 (hTom20) gene, which is 96.2% similarity with the hTom20 cDNA and is 5′ and 3′ truncated. In addition, we present the complete characterization of Ψ1Tom20 and Ψ2Tom20, the two other recently reported members of this pseudogene family. Comparison of the sequences of Ψ3Tom20 with that of the previously reported Ψ2Tom20 revealed and corrected an error in the previously determined sequence of Ψ2Tom20. A detailed analysis of these three pseudogenes, including their flanking regions, is presented. It suggests they probably arose from mRNAs that were polyadenylated at different sites. Possible mechanisms involved in their integration as retroposons are also discussed.
    Type of Medium: Electronic Resource
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