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  • 1
    ISSN: 1432-2145
    Keywords: Key words Chitinase ; Defence ; Differential hybridization ; Fruit development ; Gibberellin ; Histone H2B
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A set of fifteen cDNA clones from apple (Malus domestica Borkh) corresponding to fruit genes induced or enhanced by pollination have been identified by differential hybridization. Expression of corresponding mRNAs was induced in apple flowers by pollination, and in six clones mRNA levels also showed induction by gibberellin treatment of flowers. Sequence analysis and database searches showed that these cDNAs correspond to genes involved in defence responses, transport, protein and flavonoid synthesis, as well as cell division. One of the pollination-enhanced cDNAs was found to be similar to plant and animal genes encoding histone H2B. This mRNA was very highly expressed in flower buds and in fruit at early stages of development, but transcript levels were relatively low in young leaves and shoot tips. RNA in situ hybridization showed histone H2B mRNA detectable at high levels in the nucellus tissue of ovules in unopened flower buds. Five days after pollination, transcript levels decreased in the nucellus; however, weak signals were observed in the fleshy cortex tissue.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-5028
    Keywords: germination ; gymnosperm ; PCR ; in situ hybridization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have isolated a cDNA clone corresponding to a histone H2A gene from Norway spruce, Picea abies (L.) Karst. The clone was isolated on the basis of the preferential expression of the corresponding gene during germination. The identification of the clone was based on the high degree of nucleotide sequence identity (60–65%) to a range of eukaryotic histone H2A genes and the presence of a 9 amino acids long sequence identical to the conserved ‘H2A box’ in the deduced amino acid sequence. Like other plant histone genes, the spruce histone H2A gene encodes a polyadenylated transcript. Further, the spruce gene contains an intervening sequence of 891 bp in the coding region. The presence of introns is typical of a distinct class of replication-independent histone genes in other eukaryotes. However, the sequence of the spruce gene and its high expression in mitotically active tissues such as the apical meristem, strongly suggests that it belongs to the class of replication-dependent histone genes. This is the first documentation of an intervening sequence in this class of histone genes and the finding implies that introns were present in the ancestral histone H2A gene before the divergence of the two classes of histone genes.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Plant molecular biology 27 (1995), S. 391-403 
    ISSN: 1573-5028
    Keywords: cell cycle ; gymnosperm ; intron ; PCR ; pseudogene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The p34cdc2 protein kinase is a key component in the regulation of the eukaryotic cell cycle and has been conserved during evolution. We have isolated cDNA clones corresponding to a cdc2 gene (cdc2Pa) from the conifer Norway spruce, Picea abies (L.) Karst. The deduced amino acid sequence is 85–90% identical to p34cdc2 homologues from other plants, contains eleven subdomains characteristic for the protein kinase family, and three sequence motifs specific for the cdc2 protein kinases. A partial genomic clone of cdc2Pa reveals two introns at positions identical to intron positions in Arabidopsis thaliana cdc2a. A Southern blot analysis shows that cdc2Pa is a single-copy gene belonging to a family of about 10 related genes. Partial genomic sequences of six of the genes in this family (86–92% identical to cdc2Pa) show distinct features of processed retropseudogenes. These lack introns and contain deletions, insertions and/or non-silent point mutations. This result is consistent with the hypothesis that processed retropseudogenes in plants may be common among genes expressed in the apical meristem, that is, in cells which have the potential to take part in the formation of reproductive organs. Although cdc2Pa transcripts were abundant in the epicotyl and thus likely in the apical meristem, we observed no strict coupling of expression to cell division in embryos and seedlings.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Plant molecular biology 36 (1998), S. 767-774 
    ISSN: 1573-5028
    Keywords: genome size ; molecular evolution ; nucleotide substitution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The p34cdc2 protein and other cyclin-dependent protein kinases (CDK) are important regulators of eukaryotic cell cycle progression. We have previously cloned a functional cdc2 gene from Picea abies and found it to be part of a family of related sequences, largely consisting of pseudogenes. We now report on the isolation of partial cdc2 pseudogenes from Picea engelmannii and Picea sitchensis, as well as partial functional cdc2 sequences from P. engelmannii, P. sitchensis and Pinus contorta. A high level of conservation between species was detected for these sequences. Phylogenetic analyses of pseudogene and functional cdc2 sequences, as well as the presence of shared insertions or deletions, support the division of most of the cdc2 pseudogenes into two subfamilies. New cdc2 pseudogenes appear to have been formed in Picea at a much higher rate than they have been obliterated by neutral mutations. The pattern of nucleotide changes in the cdc2 pseudogenes, as compared to a presumed ancestral functional cdc2 gene, was similar to that previously found in mammalian pseudogenes, with a strong bias for the transitions C to T and G to A, and the transversions C to A and G to T.
    Type of Medium: Electronic Resource
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