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  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 74 (1990), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract The population dynamics of 4 F. oxysporum strains incubated in sterilized soil have been studied for 35 days. Enumeration of fungal propagules was carried out by the soil dilution plate technique. The qualitative variations of the populations were viewed by epifluorescent microscopy after staining the fungal propagules in soil with Calcofluor. A logistic model was used to describe population dynamic parameters. The predominant mode of growth of F. oxysporum in sterilized soil involved abundant production of conidia during the exponential phase. The increase of the propagules resulting from mycelial development during the lag phase was not taken into account by the logistic model. By determining the density of the population at the end of the lag phase, growth parameters of different F. oxysporum strains have been identified allowing the saprophytic competence of each strain to be characterized.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 86 (1991), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract Inoculation of fungi into soil has been suggested for biological control of plant diseases. The aim of our work was to test the ability of protozoa to reduce the density of introduced fungal populations. The survival of Fusarium oxysporum in non-sterile soil was studied after introduction at densities of: 1 × 104, 1 × 106 and 5 × 107 cfu/g soil. The dynamics of protozoa were also followed. The fungal populations remained close to the initial inoculation densities and did not induce the growth of indigenous protozoa. A bacterial population (Enterobacter aerogenes) was used to promote and stimulate the predatory activity of amoebae. Then, after simultaneous inoculation with bacteria and fungi, the density of protozoa increased but this had no effect on the fungal population, although some amoebae are able to feed on small fungal propagules such as conidia. The physiological state of Fusarium in soil and intraspecific competition seem to be more important in regulating introduced fungal populations than amoebal predation. We conclude that the regulation of bacterial and fungal populations in soil depend on different mechanisms.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Freshwater biology 20 (1988), S. 0 
    ISSN: 1365-2427
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: SUMMARY. 1. Eutrophication of water bodies involves the enrichment of plant nutrients, often followed by significant shifts in the phytoplankton towards Cyanobacteria. When comparing different aquatic systems, even with similar nutrient contents and in the same climatic region, inverse deductions are not valid; i.e. (a) the presence of Cyanobacteria does not necessarily indicate eutrophic conditions, or (b) eutrophic or even poly-trophic conditions do not necessarily support cyanobacterial development.2. Above a threshold of 10 μg 1−1 total phosphorus, the development of Cyanobacteria can be described by physical factors, such as water column stability. By characterizing different forms of turbulence, the presence or absence of Cyanobacteria in lakes and rivers can be predicted.3.When the turbulence of the water column is rather low, as it is in sheltered or meromictic lakes, Cyanobacteria can build up dense populations. In nutrient poor systems, species of Oscillatoria and (seldom) Aphanizomenon are dominating.4.If the turbulence of the water column is high (mixing depth much greater than euphotic depth) or the mixing pattern is irregular, as in slowly flowing or regulated rivers, Cyanobacteria are outcompeted.5. In the presence of frequent or permanent turbulence, but with mixing depths lower or not much greater than the euphotic zone (as it is the case in shallow, unstratified lakes, mostly eutrophic or even hypertrophic), Cyanobacteria can outgrow normally dominant r-strategists under conditions of low N:P ratios, high water temperatures, pH 〉9.0 or low light availabilities.6. If turbulence is comparatively great (10 to $15 m) and stable for a longer period of time, some cyanobacteria are able to adapt.7. Our statements are discussed on the basis of physiological characteristics.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1365-2427
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: 1. We investigated the effect of refractory dissolved organic matter (refractory DOM: fulvic acids (FAs) and ultrafiltrates (UFs)), isolated from five different sources, on the reproduction of the bacterivorous nematode Caenorhabditis elegans. Nematodes were exposed to DOM (0.5–64 mg L−1 dissolved organic carbon) during a whole life cycle (72 h). At the end of the test, the number of offspring per worm was determined. 
2. We also studied the effect of refractory DOM on abundance, cell size, and activity of the bacteria (Escherichia coli) that were used as a food source for the nematodes, to assess possible indirect effects of DOM via the food organisms. 
3. The effects of DOM on the reproduction of C. elegans varied, depending on the origin and concentration of DOM. FAs isolated from a soil leachate and from the effluent of a waste water plant, as well as UFs from a humic lake and from a marsh, stimulated the reproduction of C. elegans. FAs from ground water had no effect, while FAs from a humic lake inhibited the reproduction of the nematodes. All effects occurred at ecologically relevant DOM concentrations and showed clear dose–response relationships. 
4. Neither bacterial abundance nor cell size were influenced by refractory DOM. Bacterial activity was unaffected by four types of DOM. Only FAs from the humic lake caused a significant decrease in bacterial activity over 72 h. 
5. The negative effect of FAs from the humic lake on nematode reproduction may be a consequence of a lower bacterial activity in this treatment. The positive effects of refractory DOM, however, could not be related to bacterial parameters. Therefore, we assume that the DOM directly influenced the reproduction of C. elegans. We speculate that refractory DOM can potentially be an additional carbon source or a source of trace nutrients influencing the reproduction of C. elegans. Adsorption of refractory DOM on bacterial cells, serving as food for the nematodes, may have been an important factor for the availability of DOM for C. elegans.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Sixty strains of Fusarium oxysporum were characterized by (i) in vitro growth parameter estimates on four carbon sources and (ii) vegetative compatibility grouping. Growth was assessed by measuring optical density changes of fungal cultures in microtiter plates. Principal component analyses of growth parameter estimates permitted a good discrimination of the isolates on the four carbon sources and revealed a high level of diversity within populations of F. oxysporum. The 60 strains were assigned to 40 vegetative compatibility groups. Strains grouped in a given vegetative compatibility group had similar growth parameters. Trophic characterization and vegetative compatibility groups were compared to a genotypic characterization previously performed on this collection. Trophic characterization and vegetative compatibility grouping were more discriminating than the genotypic characterization. The three characterization methods suggested that vegetative compatibility groups could be considered the population unit among natural F. oxysporum populations.
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: The genetic diversity of soil-borne populations of Fusarium oxysporum was assessed using 350 isolates collected from six different French soils. All isolates were characterised by restriction fragment analysis of the PCR-amplified ribosomal intergenic spacer (IGS). Twenty-six IGS types were identified among the 350 isolates analysed. Five to nine different IGS types were detected in each soil. None of the IGS types was common to all of the soils. An analysis of the molecular variance based on IGS type relationships and frequency revealed that the genetic structure of the populations of F. oxysporum varied widely among the soils. Some populations were both highly diverse within the soils and differentiated between the soils. A possible relationship between the intrapopulation or interpopulation level of diversity and some external factors such as the soil type or the crop history was evaluated. A subsample representative of the diversity of the six populations was further characterised by analysing the genomic distribution of two transposable elements, impala and Fot1. One to 10 copies of the impala element were present in most of the isolates, irrespective of their soil of origin. The Fot1 element was only detected in 40% of the isolates originating from the three populations less diverse in terms of IGS types, but in 82.6% of the isolates originating from the three more diverse populations.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology ecology 9 (1991), S. 0 
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology ecology 7 (1990), S. 0 
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Monitoring the structure and dynamics of fungal communities in soils under agricultural and environmental disturbances is currently a challenge. In this study, a terminal restriction fragment length polymorphism (T-RFLP) fingerprinting method was developed for the rapid comparison of fungal community structures. The terminal restriction fragment polymorphism of different regions of the small-subunit (SSU) ribosomal RNA (rRNA) gene was simulated by sequence comparison using 10 restriction enzymes, and analyzed among three different soils using fungal-specific primers. Polymerase chain reaction amplification of the 3′ end of the SSU rRNA gene with the primer nu-SSU-0817-5′ and with the fluorescently labelled primer nu-SSU-1536-3′, and digestion of the amplicons with AluI and MboI were found to be optimal and were used in a standardized T-RFLP procedure. Both the number and the intensity of terminal restriction fragments detected by capillary gel electrophoresis were integrated in correspondence analyses. Three soils with contrasting physicochemical properties were differentiated according to the structure of their fungal communities. Assessment of the impact on the fungal community structure of the amendment of two soils with compost or manure confirmed the reproducibility and the sensitivity of the method. Shifts in the community structure were detected between non-amended and amended soil samples. In both soils, the shift differed with the organic amendment applied. In addition, the fungal community structures of the two soils were affected in a different way by the same organic amendment. The fingerprinting method provides a rapid tool to investigate the effect of various perturbations on the fungal communities in soils.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1432-1130
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The determination of CO2 saturation by two different methods is described for freshwater bodies of differing trophic states, hydrology and chemistry in the North-East of Germany. Direct measurements were carried out by gas chromatography and values were calculated from the dissolved inorganic carbon concentration and pH. These results were in good agreement. In both cases, the CO2 saturation index was calculated from the carbon dioxide/carbonate/hydrogencarbonate equilibrium in water. An overestimation of CO2 saturation index will be caused at pH 〉 7 by neglecting the calcium forming ion pairs with HCO3– and CO32–. The CO2 saturation patterns exhibited seasonal changes in all the lakes investigated which were variable within each trophic group. A direct relationship was found between the increasing trophic state and undersaturation of CO2 during the periods of high primary production. Thus, with respect to the atmosphere, these freshwater bodies act mostly as sources of CO2. Periods of ice covering and clear-water phases are characterized by high CO2 supersaturation and therefore the surface waters investigated are CO2 sources for short periods only.
    Type of Medium: Electronic Resource
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