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  • 1
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 55 (1999), S. 448-457 
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: The investigation of the structure of the four conformers of the nonapeptide described here has an additional purpose: to illustrate a method for combining isomorphous replacement information with anomalous dispersion information within the linear equations that have found use in the analysis of multiple-wavelength anomalous dispersion data. In the present application, isomorphous replacement data were obtained from the replacement of naturally occurring S atoms in the nonapeptide with Se atoms. Only one wavelength was used for the analysis: Cu Kα radiation. Details of the analysis are presented, as well as the structural results obtained. It was found that the four independent molecules in the structure have similar, but not identical, conformations. The backbones fold into predominantly α-helices with one or two 310-type hydrogen bonds and have extended side chains. Three to four water molecules are associated with each of the four head-to-tail regions between the peptides. Optimal packing between hydrophobic surfaces may account for the existence of four molecules in an asymmetric unit.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 51 (1995), S. 411-415 
    ISSN: 1600-5740
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 51 (1995), S. 1063-1068 
    ISSN: 1600-5740
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1432-2072
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 60 (1996), S. 1691-1700 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: By performing ab initio calculations on fragments of leu1(SINGLEBOND)zervamicin, it is demonstrated that accurate wave functions can be obtained for this large structure by combining the results from the fragments. Input information consists of atomic coordinates as obtained, for example, from a crystal structure determination. The fragments are composed of a kernel of atoms surrounded by a chosen neighborhood of atoms. The entire molecule is divided into individual kernels and their neighborhoods are added for the individual fragment calculations on the basis of the distances of other atoms from the atoms in a kernel. The hydrated leu1(SINGLEBOND)zervamicin is composed of 295 atoms which could be handled in full by Gaussian 94. The results of the fragment calculations were combined to provide an electron density distribution for the molecule. This distribution was compared with one that represents the distribution obtained from a calculation on the entire molecule at once. The clear implication of this study is that it is feasible to perform ab initio calculations on structures by the use of fragments. The time involved increases essentially linearly with complexity. © 1996 John Wiley & Sons, Inc.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 56 (1995), S. 371-384 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Quantum crystallography is a developing technique for extracting quantum mechanically valid properties from X-ray diffraction experiments. Quantum mechanics and crystallography are joined through the fact that the electron distributions around atoms are the source of X-ray diffraction and electron density distributions are observables that lend themselves readily to quantum mechanical description. Direct contact with the X-ray diffraction data is made by equating the structure factor magnitudes, which are readily obtained from the measured X-ray diffraction intensities, with the magnitudes of certain Fourier transforms of the quantum mechanical description of the electron distribution. The quantum mechanical description of the electron density involves molecular orbitals and an associated matrix. By requiring that the associated matrix be a projector with a normalized trace, while optimizing the fit to the experimental structure factor magnitudes, strong constraints are imposed on the relationship between the X-ray data and the quantum mechanical description of the electron density distribution. The final result should be a wave function that is in good agreement with the X-ray diffraction information and from which a variety of properties, e.g., electron densities and electrostatic potentials, could be extracted. The method for making the fit to the X-ray data involves the use of least-squares calculations in which the defining equations are the structure factor equations and equations that arise from the conditions defining a projector matrix with a normalized trace. The variables are the elements of the projector. It is also possible to refine such parameters as atomic coordinates. The calculations are facilitated by use of good initial projector matrices. For this purpose, a method has been developed for generating projector matrices for large molecules from the sum of kernel matrices. Kernel matrices are obtained from the use of fragments of the known atomic coordinates of the substance of interest and the application of molecular orbital methods in quantum mechanics. The use of fragments is justified by the fact that overlap integrals rapidly approach zero as the distances between atoms increase. © 1995 John Wiley & Sons, Inc.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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