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  • 1
    Digitale Medien
    Digitale Medien
    Springer
    Theoretical chemistry accounts 96 (1997), S. 141-145 
    ISSN: 1432-2234
    Schlagwort(e): Key words: Nitrogenase ; Nitrogen fixation ; FeMo enzymes ; Oxidation reduction of FeMo cofactor ; INDO
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Chemie und Pharmazie
    Notizen: Abstract. Reduced and oxidized forms of the FeMo- cofactor of Azotobacter vinelandii nitrogenase are examined theoretically within the intermediate neglect of differential overlap model. The results obtained favor one of the experimentally suggested modes of contraction of the metal system which results in an expansion of the central cavity of the cofactor. The bond index analysis indicates marked changes in the Mo coordination upon electron addition which may contribute to an opening of the Mo atom as a possible binding site at the advanced stages of the reduction process. In this work we also compare the 39- and 41-electron [MoFe7] core as possible native resting states, both compatible with known spin and Mössbauer spectroscopies.
    Materialart: Digitale Medien
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  • 2
    Digitale Medien
    Digitale Medien
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 2 (1996), S. 83-87 
    ISSN: 0947-6539
    Schlagwort(e): enzyme models ; iron complexes ; molybdenum complexes ; nitro genase ; semi-empirical calculations ; Chemistry ; General Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: A model for the active site of nitrogenase is suggested and examined by means of the intermediate neglect of differential overlap (INDO) quantum mechanical method. The initial steps of the nitrogen fixation process are discussed within the framework of the present model, and it is shown that of several binding sites, initial location of the nitrogen molecule inside the MoFe cofactor is favored. Possible pathways for electron and proton delivery to the active site are also suggested on the basis of electrostatic potential calculations.
    Zusätzliches Material: 4 Ill.
    Materialart: Digitale Medien
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  • 3
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 69 (1998), S. 691-691 
    ISSN: 0020-7608
    Schlagwort(e): Chemistry ; Theoretical, Physical and Computational Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: No abstract.
    Materialart: Digitale Medien
    Bibliothek Standort Signatur Band/Heft/Jahr Verfügbarkeit
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  • 4
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 70 (1998), S. 3-40 
    ISSN: 0020-7608
    Schlagwort(e): Chemistry ; Theoretical, Physical and Computational Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: No abstract.
    Materialart: Digitale Medien
    Bibliothek Standort Signatur Band/Heft/Jahr Verfügbarkeit
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  • 5
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 70 (1998), S. 1159-1168 
    ISSN: 0020-7608
    Schlagwort(e): nitrogenase ; nitrogen fixation ; INDO ; DFT ; PM3tm ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: We follow the initial activation of the nitrogen molecule at the FeMo cofactor of nitrogenase and subsequently model the hydrogenation of N2 up to the fourth protonation step using the intermediate neglect of differential overlap quantum-chemical model. The results obtained favor a reaction mechanism going through hydrazido intermediates on the 4-Fe surfaces, externally to the FeMo cofactor. Calculations using density functional theory on smaller model systems also support the suggested mechanism over other possible schemes that involve early release of the first molecule of ammonia as a product of the enzymatic reaction. We also demonstrate that dielectric stabilization due to the protein around the cofactor could lower markedly the barrier for the product release as an ammonium ion.   © 1998 John Wiley & Sons, Inc. Int J Quant Chem 70: 1159-1168, 1998
    Zusätzliches Material: 10 Ill.
    Materialart: Digitale Medien
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  • 6
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 63 (1997), S. 781-795 
    ISSN: 0020-7608
    Schlagwort(e): ferredoxins ; ROHF ; UHF ; Hartree-Fock theory ; spin-projection ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: We examine the electronic structure and spectrosopy of [Fe2S2(SH)4]2-, a simple model for ferredoxins, utilizing unrestricted Hartree-Fock (UHF), projected unrestricted Hartree-Fock (PUHF), restricted open-shell Hartee-Fock (ROHF) with configuration interation (CI), and configuration averaged Hartree-Fock (CAHF)-CI procedures. Our lowest-energy calculation, PUHF, predicts a ground state which is diamagnetic (antiferromagnetic) in agreement with experiment, with a calculated Heisenberg exchange splitting value JH of -161 cm-1 and a Mössbauer quadrupole splitting constant (ΔEQ) of 1.04 mm/s, in reasonable agreement with experimental observations that these compounds are diamagnetic with JH values of between -54 and -183 cm-1 and ΔEQ values of 0.72 mm/s. Although the PUHF model gives the most systematic results for the ground state, ROHF-CI calculations using localized orbitals are also quite good. The use of delocalized ROHF orbitals gives a strong bias to the high-spin 11-tet (ferromagnetic) situation, which is very difficult to correct through CI. CAHF-CI calculations that recognize the local nature of the d-orbitals also yield results in good agreement with experiment and are simple to perform. We tried to calculate the charge-transfer spectrum of these complexes assuming a diamagnetic ground state and found this difficult to do for any reasonably sized CI. Rather, we used a perturbative approach which allows the calculation of the low-spin case from the far simpler high-spin calculation. Using this, our estimated charge transfer is, on average, calculated 1600 cm-1 too high in energy when compared to experiment. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 781-795, 1997
    Zusätzliches Material: 4 Ill.
    Materialart: Digitale Medien
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  • 7
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 877-884 
    ISSN: 0020-7608
    Schlagwort(e): Chemistry ; Theoretical, Physical and Computational Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: A spin-averaged Hartree-Fock (SAHF) procedure is examined within the framework of the configuration-averaged methodology proposed earlier. The SAHF method produces reasonable total energies and can be successfully used for the calculation of electronic spectra, especially in the cases of marked energy separation between the spin states. An example is given with the spectroscopy of Mn2+ ions in the ZnS crystal where the SAHF procedure provides a more accurate interpretation of the electronic spectrum than that obtained by other self-consistent-field methods.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 877-884, 1997
    Zusätzliches Material: 4 Ill.
    Materialart: Digitale Medien
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  • 8
    Digitale Medien
    Digitale Medien
    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 22 (1990), S. 1189-1210 
    ISSN: 0538-8066
    Schlagwort(e): Chemistry ; Physical Chemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie
    Notizen: The reactions of ℓ-C3H3+ (propargylium cation) with acetylene and diacetylene have been modeled kinetically. Data were obtained from Fourier Transform Ion Cyclotron Resonance (FTICR) experiments on these systems, which are themselves models for soot particle initiation. Acetylene forms an encounter complex with ℓ-C3H3+, but, in the absence of a third body collision, the complex decomposes to acetylene and c-C3H3+ (cyclopropenylium cation) at about 1/3 the rate it decomposes to acetylene and ℓ-C3H3+, in spite of the fact that c-C3H3+ is ca. 115 kJ/mol more stable than ℓ-C3H3+. The encounter complex is long enough lived, and energetic enough, to scramble deuterium in reactions between ℓ-C3H3+ and C2D2. These reactions have been successfully modeled, yielding a nearly statistical distribution of deuterium, and a rather large kinetic isotope effect. The more complex reactions of ℓ-C3H3+ with diacetylene have also been modeled.
    Zusätzliches Material: 6 Ill.
    Materialart: Digitale Medien
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