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  • 1
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Biospectroscopy 4 (1998), S. 219-227 
    ISSN: 1075-4261
    Keywords: guanosine 5′-diphosphate ; guanosine 5′-triphosphate ; magnesium ; vibrational spectroscopy ; Raman spectroscopy ; FTIR ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Physics
    Notes: Raman and infrared spectra were examined for guanosine 5′-diphosphate (GDP) and guanosine 5′-triphosphate (GTP) in aqueous solution. The vibrational modes were assigned on the basis of isotopic frequency shifts and relative intensities in the Raman and infrared spectra. The observed frequency shifts on 18O isotope labeling made it possible to identify the bands from each phosphate group (α, β, γ). Frequency shifts were observed as Mg2+ complexes with GDP and GTP. The results suggested that Mg2+ binds to GDP in a bidentate manner to the α, β P · · O bonds and in a tridentate manner to the α, β and γ P · · O bonds of Mg·GTP. The results indicate that structure of Mg2+ coordinated to GTP in aqueous solution differs somewhat to that found for Mg·ATP. © 1998 John Wiley & Sons, Inc. Biospectroscopy 4: 219-227, 1998
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1075-4261
    Keywords: cellular retinol-binding protein ; retinol-binding protein ; vibrational spectroscopy ; Raman spectroscopy ; FTIR ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Physics
    Notes: Preresonance Raman difference spectra have been obtained for all-trans retinal in dilute CCl4 solution, complexed with cellular retinol-binding protein (CRBP-I) and retinol-binding protein (RBP). These spectra indicate that retinal is of a slightly more planar conformation within the binding pocket of CRBP-I than in solution or hydrophobically complexed with RBP. Compared to retinal in solution or bound to RBP, the conformation of the polyene tail of the retinal chromophore is perturbed from C8 through C11. This perturbation is probably due to the close proximity of the Lys40 in the CRBP-I binding pocket to the above-mentioned carbons. The C(DOUBLE BOND)O stretching vibration of bound retinal carbonyl has been found to shift from 1664 cm-1 solubilized in CCl4 to 1650 and 1645 cm-1 in RBP and CRBP-I, respectively, and significantly broadened in both cases. The frequency shift and broadening have been attributed to hydrogen bonding. These have been compared to calibrations of frequency shift (ΔνC(DOUBLE BOND)O) vs. ΔH and ΔG of all-trans retinal complexed with a series of phenol derivatives of incremental proton-donating ability as obtained by the relationship of van't Hoff. By this relationship, the binding enthalpy of the all-trans retinal carbonyl moiety bound to CRBP-I and RBP is -28.1 kJ/mol (-6.7 kcal/mol) and -23.5 kJ/mol (-5.6 kcal/mol), respectively. The free energy of binding of the retinal carbonyl bound to CRBP-I and RBP has been determined to be -10.5 kJ/mol (-2.5 kcal/mol) and -7.2 kJ/mol (-1.7 kcal/mol), respectively. The hydrogen-bonded C(DOUBLE BOND)O moiety of retinal complexed with CRBP-I accounts for a substantial (25%) but not overriding amount of the binding energy of CRBP-I for retinal, and it also accounts for the protein's preference for binding retinol. © 1997 John Wiley & Sons, Inc. Biospect 3: 131-142, 1997
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Chichester [u.a.] : Wiley-Blackwell
    Journal of Raman Spectroscopy 20 (1989), S. 541-545 
    ISSN: 0377-0486
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: In order to obtain the Raman spectra of small molecules inside proteins (or other large macromolecules) and/or small molecular groups of a protein, techniques were developed to perform sensitive Raman difference spectroscopy. The macromolecule-small molecule complex Raman spectrum is taken in addition to the Raman spectrum of the macromolecule, and the two are computer subtracted. For studies on proteins, it is necessary to use optical multichannel detectors, as spectrometers employing photomultiplier detectors are too slow optically to collect signals from dilute samples. The apparatus is described and characterized in detail. A subtraction fidelity of 0.1% can be achieved for samples, such as proteins, which contain broad bands in their Raman spectra. Hence it is possible to obtain fairly good Raman spectra of very small molecular groups inside proteins. An example from recent work is presented.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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