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  • 1
    ISSN: 1572-8854
    Keywords: aminopyrimidine ; copper ; stacking ; hydrogen bonding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract Reaction of Cu(II) triflate with an excess of 2-aminopyrimidine (ampym) in ethanol followed by slow crystallization results in a most unusual crystal lattice, which can be considered as consisting of two interpenetrating sublattices. The compound analyzes as [Cu(ampym)2(H2O)2(CF3SO3)2(ampym)4]. Crystal data: Triclinic, P $$\overline 1$$ , a = 7.6179(5), b = 11.4311(14), c = 11.8373(13) Å, α = 84.098(9), β = 79.998(7), γ = 84.253(8)°, Vol = 1010.151(8) Å, Z = 1, Dcalc = 1.592 g/cm3. One part of the lattice consists of the unprecendented linear chain of neutral ampym molecules; the chain is built up by Watson–Crick type bis-hydrogen bonds between imine N atoms and N-H groups of the NH2. This ampym chain is apparently stabilized by the other part in the crystal lattice, which can best be described by starting from the centrosymmetric trans-CuII(ampym)2(H2O)2 ion (Cu-N = 2.01 Å; Cu-O = 1.94 Å). This Cu ion is coordinated by two monodentate ampym ligands, two water molecules and two semi-coordinating triflate oxygen atoms. The Cu chromophore is held in position by hydrogen bonding towards a triflate ion (two times for symmetry reasons), and (again two times) a free ampym ligand. The triflate ion bridges a water hydrogen to a next-neighboring free ampym ligand. The noncoordinating ampym molecule has four bonding sites, of which two are used in H-bonding with the coordinated ligand, one with the triflate and the last one with the water hydrogen atom. The noncoordination ampym molecules in this sublattice finally form aromatic stacks with coordinated ampym and with itself in pairs (ring-ring distance 3.77-3.80 Å).
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-515X
    Keywords: diagenesis ; modelling ; organic matter ; pore water ; redox ; sediment
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences
    Notes: Abstract Pore-water concentrations of inorganic solutes were measured at four locations in a recent sedimentation area of the river Meuse in The Netherlands. The pore-water concentration profiles were interpreted using the steady state one-dimensional reaction/transport model STEADYSED1. This model explicitly accounts for the organic matter degradation pathways and secondary redox reactions. Results show that the model reproduces the measured pore-water profiles of redox species reasonably well, although significant divergence is observed for pH. The latter is due to the absence of pH buffering by CaCO3 in the model. At all locations, methanogenesis is the major pathway of organic matter degradation below 3 cm from the sediment-water interface. However, organic matter degradation rates by methanogenesis may be overestimated, because methane ebullition is not included. Differences in profiles of redox-sensitive ions among the four locations are explained by differences in depositional conditions, in particular the sediment accumulation rate and supply of organic matter.
    Type of Medium: Electronic Resource
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