Skip to main content
Log in

In vivo transcriptional pattern in theinfC operon ofBacillus stearotbermophilus

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

By Northern blot and primer extension analyses it was shown that inBacillus stearothermophilus the genesinfC, rpmI andrplT constitute a single transcriptional unit; the promoter and the transcriptional start-point used in vivo were identified and the half-life of the transcript (1.2 min) was determined. No indication of multiple initiation sites nor of differential stability of different regions of the transcript was found. The results suggest thatEscherichia coli andB. stearothermophilus have a different pattern of transcription around theinfC gene cluster and that differential translational efficiency within theinfC-rpmI-rplT transcriptional unit accounts for the different levels of 1173, L35 and L20 expression. The rare AUU initiation codon is the only strictly conserved element of the several peculiar transcriptional and translational features found inE. coli infC. Upon changing this codon to AUG, we found a ca. 30-fold increased expression ofB. stearothermophilus infC, which is similar to that previously found withE. coli infC (i.e. 40-fold), and provided evidence that regulation ofinfC expression through its rare AUU initiation codon might be a general phenomenon in bacteria.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Brombach M, Pon CL (1987) The unusual translational initiation codon AUU limits the expression of theinfC (initiation factor IF3) gene ofEscherichia coli. Mol Gen Genet 208:94–100

    Article  PubMed  CAS  Google Scholar 

  • Butler JS, Springer M, Grunberg-Manago M (1987) AUU-to-AUG mutation in the initiator codon of the translation initiation factor IF3 abolishes translational autocontrol of its own gene (infC) in vivo. Proc Natl Acad Sci USA 84:4022–4025

    Article  PubMed  CAS  Google Scholar 

  • Coleman J, Green P, Inouye M (1984) The use of RNAs complementary to specific mRNAs to regulate the expression of individual bacterial genes. Cell 37:429–436

    Article  PubMed  CAS  Google Scholar 

  • Comer MM (1981) Gene organization around the phenylalanyltransfer ribonucleic acid synthetase locus inEscherichia coli. J Bacteriol 146:269–274

    PubMed  CAS  Google Scholar 

  • Davis L, Dibner M, Battey JF (1986) Basic methods in molecular biology. Elsevier, NY, pp 143–146

    Google Scholar 

  • Gold L, Stormo G, Saunders R (1984)Escherichia coli translation initiation factor IF3: a unique case of translational regulation. Proc Natl Acad Sci USA 81:7061–7065

    Article  PubMed  CAS  Google Scholar 

  • Gualerzi CO, Pon CL (1990) Initiation of mRNA translation in prokaryotes. Biochemistry 29:5881–5889

    Article  PubMed  CAS  Google Scholar 

  • Gualerzi CO, La Teana A, Spurio R, Canonaco MA, Severini M, Pon CL (1990) Initiation of protein biosynthesis in prokaryotes. Recognition of mRNA by ribosomes and molecular basis for the function of initiation factors. In: Hill WE, Dahlberg A, Garrett RA, Moore PB, Schlessinger D, Warner JR (eds) The ribosome. Structure, function and evolution, American Society for Microbiology, Washington, DC, pp 281–291

    Google Scholar 

  • Hennecke H, Springer M, Böck A (1977) A specialized transducing lambda phage carrying theEscherichia coli genes for phenylalanyl-tRNA synthetase. Mol Gen Genet 152:205–210

    Article  PubMed  CAS  Google Scholar 

  • Hershey JWB (1987) Protein synthesis. In: Neidhardt FC, Ingraham JL, Low KB, Magasanik B, Schaechter M, Umbarger HE (eds)Escherichia coli andSalmonella typhimurium — cellular and molecular biology. American Society for Microbiology, Washington, DC, pp 613–647

    Google Scholar 

  • Kimura M, Ernst H, Appelt K (1983) The primary structure of initiation factor IF3 fromBacillus stearothermophilus. FEBS Lett 160:78–81

    Article  PubMed  CAS  Google Scholar 

  • Lammi M, Pon CL, Gualerzi CO (1987) The NH2-terminal cleavage ofEscherichia coli translational initiation factor IF3. A mechanism to control the intracellular level of the factor? FEBS Lett 215:115–121

    Article  PubMed  CAS  Google Scholar 

  • Lesage P, Truong HN, Graffe M, Dondon J, Springer M (1990) Translated translational operator inEscherichia coli. Auto-regulation in theinfC-rpmI-rplT operon. J Mol Biol 213:465–475

    Article  PubMed  CAS  Google Scholar 

  • La Teana A, Falconi M, Scarlato V, Lammi M, Pon CL (1989) Characterization of the structural genes for the DNA-binding protein H-NS in Enterobacteriaceae. FEBS Lett 244:34–38

    Article  PubMed  CAS  Google Scholar 

  • La Teana A, Falconi M, Pawlik RT, Spurio R, Pon CL, Gualerzi CO (1990) The function of initiation factors in relation to mRNA-ribosome interaction and regulation of gene expression. In: McCarthy JEG, Tuite MF (eds) Post-transcriptional control in gene expression. Springer-Verlag, Heidelberg, pp 443–453

    Google Scholar 

  • Mayaux JF, Fayat G, Fromant M, Springer M, Grunberg-Manago M, Blanquet S (1983) Structure and transcriptional evidence for related thrS and infC expression. Proc Natl Acad Sci USA 80:6152–6156

    Article  PubMed  CAS  Google Scholar 

  • Pon CL, Gualerzi C (1979) Qualitative and semiquantitative assay ofEscherichia coli translational initiation factor IF3. Methods Enzymol 60:230–239

    Article  PubMed  CAS  Google Scholar 

  • Pon CL, Brombach M, Thamm S, Gualerzi CO (1989) Cloning and characterization of a gene cluster fromBacillus stearothermophilus comprisinginfC, rpmI andrplT. Mol Gen Genet 218:355–357

    Article  PubMed  CAS  Google Scholar 

  • Remaut E, Tsao H, Fiers W (1983) Improved plasmid vectors with a thermoinducible expression and temperature-regulated runaway replication. Gene 22:103–113

    Article  PubMed  CAS  Google Scholar 

  • Springer M, Graffe M, Hennecke H (1977) Specialized transducing phage for the initiation factor 3 gene inEscherichia coli. Proc Natl Acad Sci USA 74:3970–3974

    Article  PubMed  CAS  Google Scholar 

  • Wada A, Sako T (1987) Primary structures of and genes for new ribosomal proteins A and B inEscherichia coli. J Biochem 101:817–820

    Article  PubMed  CAS  Google Scholar 

  • Wertheimer SJ, Klotsky R-A, Schwartz I (1988) Transcriptional patterns for thethrS-infC-rplT operon ofEscherichia coli. Gene 63:309–320

    Article  PubMed  CAS  Google Scholar 

  • Yanisch-Perron C, Vieira J, Messing J (1985) Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the Ml3mpl8 and pUC19 vectors. Gene 33:103–119

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by J.W. Lengeler

Rights and permissions

Reprints and permissions

About this article

Cite this article

Falconi, M., Brombach, M., Gualerzi, C.O. et al. In vivo transcriptional pattern in theinfC operon ofBacillus stearotbermophilus . Molec. Gen. Genet. 227, 60–64 (1991). https://doi.org/10.1007/BF00260707

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00260707

Key words

Navigation