Abstract
The crystal structure of the versatile folk medicine berberine hydrogen sulfate, (C20H18NO4)+HSO −4 , has been determined by the heavy-atom method and refined by blocked full-matrix least-squares refinement. The crystals are triclinic, space groupF¯1,a=20.370(5),b=7.435(2),c=27.427(6) Å,α=97.700(9),β=116.222(9),γ=85.456.(8)°,Z=8,D x =1.556 g cm−3,D m =1.549(5) g cm−3. The structure refined toR=0.070 for 1659 observed reflections withI(hkl)≧2.5σ[I(hkl)]. The ring system of the berberine molecule is approximately planar, with both −OCH3 groups twisted slightly out of the plane. Heterocyclic ringB has a half-chair conformation with a pseudo-two-fold axis bisecting the bonds C(9)-C(10) and C(7)-C(8), diagonal to the isoquinoline groupAB. The five-membered ringE has an envelope conformation, the apical atom C(1) being out of plane.
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Akhter, M. H., Sabir, M., and Bhide, N. K. (1977)Indian J. Med. Res. 65, 133–135.
Akhter, M. H., Sabir, M., and Bhide, N. K. (1979)Indian J. Med. Res. 70, 233–240.
Belleau, B., and Puranen, J. (1963)J. Med. Chem. 6, 325–328.
Blodgett, L. W., and Yielden, K. L. (1968)Biochem. Biophys. Acta 169, 451–460.
Borkakoti, N., and Palmer, R. A. (1978a)Acta Cryst. B 34, 482–489.
Borkakoti, N., and Palmer, R. A. (1978b)Acta Cryst. B 34, 490–495.
Carter, O. L., McPhail, A. T., and Sim, G. A. (1967)J. Chem. Soc. (A), 365–370.
Chopra, R. N., Badhwar, R. L., and Gosh, S. (1965)Poisonous Plants of India (Indian Council of Agricultural Research, New Delhi), Vol. I, p. 136.
Chopra, R. N., Nayar, S. L., and Chopra, J. C. (1956)Glossary of Indian Medicinal Plants (Council of Scientific and Industrial Research, New Delhi), p. 36.
Codding, P. W., and James, M. N. G. (1973)Acta Cryst. B 29, 935–942.
Courseille, C., Busetta, B., and Hospital, M. (1973)Cryst. Struct. Commun. 2, 283.
Creasey, W. A. (1979)Biochem. Pharmacol. 28, 1081–1087.
Cromer, D. T., and Mann, J. B. (1968)Acta Cryst. A 24, 321–327.
Chun, Y. T., Tip, T. T., Lau, K. L., Kong, Y. C., and Sankawa, U. (1979)Gen. Pharmacol. 10, 177–185.
Damak, P. M., and Riche, C. (1977)Acta Cryst. B 33, 3419–3422.
Dick, F. G. (1940)J. Am. Med. Assoc. 41, 287–288.
Doyle, P. A., and Turner, P. S. (1968)Acta Cryst. A 24, 390–397.
Duax, W. L., and Norton, D. A. (1975)Atlas of Steroid Structures (Plenum Press, London and New York).
Fukuda, H., Watanable, M., and Kudo, Y. (1970)Chem. Pharm. Bull. 18, 1299–1302.
Gear, J. R., and Spencer, I. D. (1963)Can. J. Chem. 41, 783–786.
Germain, G., Declercq, J. P., Van Meerssche, M., and Koch, M. H. J. (1977)Acta Cryst. B 33, 942–946.
Gilmore, C. J., Bryan, R. F., and Kupchan, S. S. (1976)J. Am. Chem. Soc. 98, 1947–1952.
Husain, J., and Palmer, R. A. (1981)Acta Cryst. B 37, 205–209.
Krey, A. K., and Hahn, F. E. (1969)Science 166, 755–756.
Ljungstrom, E., and Linquvist, O. (1978)Acta Cryst. B 34, 1727–1730.
Manske, R. H. F., and Rodrigo, R. G. A. (1979)The Alkaloids (Academic Press, New York, San Francisco, and London), Vol. XVII, p. 439.
Masaki, N., and Lizuka, H. (1977)J. Chem. Soc. Perkin Trans., 717–720.
Newman, M. (1976)Drugs of Today 12, 50.
Niemegeers, C. J. E., Lenaerts, F. M., and Janssen, P. A. J. (1974)Arzneim. Forsch. 24, 1633–1634.
North, A. C. T., Phillips, D. C., and Matthews, F. S. (1968)Acta Cryst. A 24, 351–359.
Palmer, R. A., and Tickle, J. H. (1983)J. Mol. Graph, in press.
Pauling, P., and Petcher, T. J. (1971)J. Med. Chem. 14, 3–7.
Reynolds, C. D., and Palmer, R. A. (1976)Acta Cryst. B 32, 1431–1439.
Reynolds, C. D., Palmer, R. A., and Gorinsky, B. (1973)J. Cryst. Mol. Struct. 4, 213–225.
Rychlewska, U., and Palenik, G. J. (1975)Acta Cryst. B 31, 2902–2904.
Sabir, M., Akhter, M. H., and Bhide, N. K. (1977)Indian J. Med. Res. 65, 305–319.
Sabir, M., Akhter, M. H., and Bhide, N. K. (1978)Indian J. Physiol. Pharmacol. 22, 1–9.
Shama, M. (1972)The Isoquinoline Alkaloids: Chemistry, and Pharmacology (Academic Press, New York and London), Vol. 25, p. 268.
Steck, E. A. (1972)The Chemotherapy of Protozoan Diseases (U.S. Government Printing Office, Washington, DC), Vol. 3, Chapter 23.
Subbaiah, T. V., and Amin, A. H. (1967)Nature 215, 527.
The Merck Index: An Encyclopedia of Chemicals and Drugs (1968) Stetcher, P. G. ed., (Merck & Co., Inc., Rahway, New Jersey).
Tiwari, K. P., and Massood, M. (1979)J. Indian Chem. Soc., 310–313.
Tollenaere, J. P., Moereels, H., and Raymaekers, L. A. (1979),Atlas of the Three-Dimensional Structure of Drugs (Elsevier/North-Holland Biomedical Press, Amsterdam, New York, Oxford).
Tranqui, D., Cromer, D. T., and Boucherle, A. (1974)Acta Cryst. B 36, 2237–2241.
Wong-Ng, W., and Nyburg, S. C. (1979)Can. J. Chem. 57, 157–162.
Yamagishi, T., and Mori, M. (1978)Hokkaidoritsu Eisei Kenkyusho Ho 28, 18–21.
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Abdol Abadi, B.E., Moss, D.S. & Palmer, R.A. Molecular structure of an ancient folk medicine: Berberine hydrogen sulfate. Journal of Crystallographic and Spectroscopic Research 14, 269–281 (1984). https://doi.org/10.1007/BF01161164
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DOI: https://doi.org/10.1007/BF01161164