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The previously unknown title compound, tetra-[mu]-ace­tato-1:2[kappa]2O;1:2[kappa]2O:O';­2:3[kappa]2O;­2:3[kappa]2O:O'-di­aqua-1[kappa]O,3[kappa]O-bis­([mu]-2-{[N-ethyl-N-(2-hy­droxy-5-methylbenzyl)­am­ino]­methyl}-1-methyl-1H-benz­imid­az­ole)-1[kappa]3N3,N,O:2[kappa]O;3[kappa]3N3,N,O:2[kappa]O-tri­nickel(II) tetra­hy­drate, [Ni3(C18H22N3O)2(C2H3O2)4(H2O)2]·­4H2O, (I), is a centrosymmetric linear trinuclear nickel(II) complex, where the Ni atoms are in an octahedral coordination and the ligand heteroatoms act so as to model amino acid residues.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100014967/qa0417sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270100014967/qa0417Isup2.hkl
Contains datablock I

CCDC reference: 156192

Comment top

NO COMMENT

Experimental top

1-Methyl-2-{[N-ethyl-N-(2-hydroxy-5-methylbenzyl)amino]methyl}-1H-benzimidazole (L; 0.224 g, 0.725 mmol) dissolved in methanol (7 ml) was added slowly to a suspension of NiBr2 (0.231 g, 0.966 mmol) in refluxing methanol. Heating was continued until dissolution of the nickel salt was complete, affording a clear green solution. Sodium acetate (0.277 g, 0.203 mmol) dissolved in methanol (5 ml) was added to the green solution. The solvent was removed under vacuum, resulting in a crude green product. This material was dissolved in acetonitrile and the solution filtered and evaporated to dryness. Recrystallization from methanol/2-propanol resulted in crystals of suitable quality for X-ray structure determination.

Refinement top

The coordinates of the two H atoms of the water molecule O8 could not be reliably located and were not included in the refinement.

Computing details top

Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1994); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN (Molecular Structure Corporation, 1992-1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: Xtal3.4 CRYLSQ (Hall et al., 1995); software used to prepare material for publication: Xtal3.4 BONDLA CIFIO.

(I) top
Crystal data top
[Ni3(C18H22N3O)2(C2H3O2)4(H2O)2]·4H2OZ = 1
Mr = 1137.15F(000) = 598
Triclinic, P1Dx = 1.419 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.5418 Å
a = 11.130 (2) ÅCell parameters from 25 reflections
b = 11.732 (2) Åθ = 17.2–26.1°
c = 12.258 (2) ŵ = 1.83 mm1
α = 99.66 (2)°T = 193 K
β = 110.34 (1)°Plate, colourless
γ = 110.23 (1)°0.12 × 0.12 × 0.02 mm
V = 1330.6 (5) Å3
Data collection top
Rigaku AFC-6R
diffractometer
2872 reflections with F > 2.5σ(Fo)'
Radiation source: Rigaku rotating anodeRint = 0.031
Graphite monochromatorθmax = 60.0°, θmin = 4.1°
ω–2θ scansh = 1112
Absorption correction: ψ scan
(North et al., 1968)
k = 1213
Tmin = 0.873, Tmax = 0.965l = 130
4152 measured reflections3 standard reflections every 150 reflections
3940 independent reflections intensity decay: 0.8%
Refinement top
Refinement on F0 restraints
Least-squares matrix: full0 constraints
R[F2 > 2σ(F2)] = 0.058H-atom parameters not refined
wR(F2) = 0.047Weighting scheme based on measured s.u.'s w = 1/σ2(Fo)
S = 1.93(Δ/σ)max < 0.001
2865 reflectionsΔρmax = 0.64 e Å3
322 parametersΔρmin = 0.68 e Å3
Crystal data top
[Ni3(C18H22N3O)2(C2H3O2)4(H2O)2]·4H2Oγ = 110.23 (1)°
Mr = 1137.15V = 1330.6 (5) Å3
Triclinic, P1Z = 1
a = 11.130 (2) ÅCu Kα radiation
b = 11.732 (2) ŵ = 1.83 mm1
c = 12.258 (2) ÅT = 193 K
α = 99.66 (2)°0.12 × 0.12 × 0.02 mm
β = 110.34 (1)°
Data collection top
Rigaku AFC-6R
diffractometer
2872 reflections with F > 2.5σ(Fo)'
Absorption correction: ψ scan
(North et al., 1968)
Rint = 0.031
Tmin = 0.873, Tmax = 0.965θmax = 60.0°
4152 measured reflections3 standard reflections every 150 reflections
3940 independent reflections intensity decay: 0.8%
Refinement top
R[F2 > 2σ(F2)] = 0.0580 restraints
wR(F2) = 0.047H-atom parameters not refined
S = 1.93Δρmax = 0.64 e Å3
2865 reflectionsΔρmin = 0.68 e Å3
322 parameters
Special details top

Experimental. The scan width was (1.30 + 0.30tanθ)° with an ω scan speed of 8° per minute (up to 5 scans to achieve I/σ(I) > 10). Stationary background counts were recorded at each end of the scan, and the scan time:background time ratio was 2:1. Data can only be collected to 2theta 120 ° on a AFC6R diffractometer when the evacuated beam tunnel in used. Mass attenuation coefficients for absorption from International Tables for X-ray Crystallography, Vol IV (1974) Table 2.1 C.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Ni10.500000.500000.500000.0280 (5)
Ni20.22639 (9)0.43520 (8)0.27164 (8)0.0255 (4)
O10.2877 (3)0.4391 (3)0.4497 (3)0.0255 (14)
O20.4235 (3)0.4344 (3)0.3044 (3)0.0268 (14)
O30.4009 (4)0.3737 (4)0.1152 (4)0.054 (2)
O40.3253 (4)0.6325 (3)0.3253 (3)0.0318 (14)
O50.5077 (4)0.6745 (3)0.5028 (3)0.0317 (14)
O60.1834 (4)0.4333 (3)0.0903 (3)0.0351 (15)
O70.6989 (5)0.3011 (4)0.8865 (4)0.060 (2)
O80.4650 (6)0.3269 (5)0.9188 (5)0.094 (3)
N10.0252 (4)0.4320 (4)0.2479 (4)0.0277 (17)
N20.1040 (4)0.2378 (4)0.2049 (4)0.0271 (17)
N30.1131 (4)0.0769 (4)0.1210 (4)0.0331 (17)
C10.0239 (6)0.4472 (5)0.3700 (5)0.031 (2)
C20.0534 (5)0.3531 (5)0.4308 (5)0.026 (2)
C30.0503 (6)0.2653 (5)0.4522 (5)0.034 (2)
C40.0245 (6)0.1869 (5)0.5193 (6)0.038 (2)
C50.1137 (7)0.1984 (5)0.5673 (6)0.041 (3)
C60.2193 (6)0.2813 (5)0.5465 (5)0.036 (2)
C70.1909 (5)0.3581 (4)0.4766 (5)0.027 (2)
C80.1390 (7)0.0966 (6)0.5421 (6)0.058 (3)
C90.0038 (6)0.5371 (5)0.2030 (5)0.035 (2)
C100.1321 (6)0.5488 (5)0.1896 (5)0.038 (2)
C110.0900 (6)0.3038 (5)0.1578 (5)0.034 (2)
C120.0324 (6)0.2073 (5)0.1631 (5)0.029 (2)
C130.1175 (6)0.1244 (5)0.1937 (5)0.028 (2)
C140.2345 (6)0.0986 (5)0.2246 (5)0.034 (2)
C150.2117 (6)0.0292 (5)0.1950 (5)0.041 (3)
C160.0735 (7)0.1296 (5)0.1362 (5)0.040 (2)
C170.0452 (6)0.1069 (5)0.1078 (5)0.041 (2)
C180.0215 (6)0.0210 (5)0.1383 (5)0.032 (2)
C190.2693 (6)0.0097 (6)0.0699 (7)0.058 (3)
C200.4626 (6)0.3920 (5)0.2281 (5)0.032 (2)
C210.5876 (6)0.3604 (5)0.2738 (5)0.040 (2)
C220.4327 (6)0.7073 (5)0.4248 (6)0.033 (2)
C230.4759 (7)0.8493 (5)0.4513 (7)0.060 (3)
H1a0.066810.439700.360200.03700*
H1b0.094900.531200.423500.03700*
H30.144090.260000.418000.04100*
H50.136200.147500.616000.05000*
H60.312500.286300.579810.04300*
H06a0.267900.422500.100410.05400*
H06b0.197700.519300.081100.05400*
H8b0.103300.048500.588000.07000*
H8c0.217790.039500.465800.07000*
H8a0.170500.144400.587410.07000*
H9a0.005090.523910.124710.04200*
H9b0.082610.616100.259400.04200*
H10b0.212090.468810.138100.04600*
H10c0.130600.572100.267800.04600*
H10a0.138800.613100.152500.04600*
H11a0.120690.309310.077010.04100*
H11b0.167510.279000.178300.04100*
H140.328010.166100.264700.04000*
H150.290900.048890.215110.04800*
H160.062210.215600.115900.04700*
H170.138100.175000.068900.04900*
H19b0.302000.077600.023910.06900*
H19c0.297090.012610.135200.06900*
H19a0.311300.050300.017410.06900*
H21b0.584900.324600.337410.04900*
H21c0.673210.435600.303810.04900*
H21a0.581100.298700.207610.04900*
H23b0.462000.868600.376610.07300*
H23c0.573190.895400.508200.07300*
H23a0.419000.872500.484300.07300*
H7a0.660250.299300.806480.08600*
H7b0.618270.277830.899580.08600*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Ni10.0249 (7)0.0222 (7)0.0267 (8)0.0057 (6)0.0077 (6)0.0022 (6)
Ni20.0250 (5)0.0181 (5)0.0248 (5)0.0036 (4)0.0103 (4)0.0012 (4)
O10.025 (2)0.022 (2)0.028 (2)0.0075 (16)0.0141 (18)0.0057 (17)
O20.021 (2)0.026 (2)0.024 (2)0.0041 (16)0.0102 (18)0.0001 (17)
O30.056 (3)0.085 (3)0.028 (3)0.042 (3)0.018 (2)0.006 (2)
O40.029 (2)0.021 (2)0.030 (2)0.0042 (17)0.007 (2)0.0008 (17)
O50.028 (2)0.0202 (19)0.034 (2)0.0076 (17)0.0049 (19)0.0044 (17)
O60.036 (2)0.031 (2)0.032 (2)0.0102 (18)0.014 (2)0.0076 (18)
O70.072 (3)0.053 (3)0.050 (3)0.024 (3)0.025 (3)0.017 (2)
O80.112 (5)0.124 (5)0.078 (4)0.067 (4)0.061 (4)0.029 (4)
N10.031 (3)0.022 (2)0.029 (3)0.010 (2)0.013 (2)0.007 (2)
N20.027 (3)0.019 (2)0.024 (3)0.003 (2)0.009 (2)0.002 (2)
N30.026 (2)0.022 (2)0.031 (3)0.002 (2)0.009 (2)0.002 (2)
C10.030 (3)0.030 (3)0.029 (3)0.011 (3)0.012 (3)0.002 (3)
C20.027 (3)0.021 (3)0.024 (3)0.005 (2)0.014 (3)0.001 (2)
C30.032 (3)0.032 (3)0.029 (3)0.010 (3)0.016 (3)0.002 (3)
C40.050 (4)0.026 (3)0.041 (4)0.010 (3)0.030 (3)0.008 (3)
C50.055 (4)0.031 (3)0.046 (4)0.022 (3)0.029 (3)0.014 (3)
C60.043 (4)0.036 (3)0.038 (4)0.020 (3)0.026 (3)0.015 (3)
C70.031 (3)0.018 (3)0.026 (3)0.008 (2)0.014 (3)0.004 (2)
C80.072 (5)0.044 (4)0.070 (5)0.017 (4)0.051 (4)0.019 (4)
C90.034 (3)0.031 (3)0.037 (4)0.014 (3)0.014 (3)0.007 (3)
C100.041 (3)0.037 (3)0.041 (4)0.021 (3)0.020 (3)0.013 (3)
C110.030 (3)0.033 (3)0.028 (3)0.006 (3)0.012 (3)0.002 (3)
C120.032 (3)0.021 (3)0.024 (3)0.004 (3)0.012 (3)0.001 (2)
C130.035 (3)0.016 (3)0.021 (3)0.001 (2)0.012 (3)0.000 (2)
C140.035 (3)0.023 (3)0.037 (4)0.008 (3)0.015 (3)0.006 (3)
C150.054 (4)0.036 (3)0.037 (4)0.025 (3)0.018 (3)0.015 (3)
C160.052 (4)0.016 (3)0.033 (4)0.005 (3)0.012 (3)0.001 (3)
C170.046 (4)0.022 (3)0.031 (4)0.002 (3)0.011 (3)0.000 (3)
C180.034 (3)0.025 (3)0.026 (3)0.006 (3)0.009 (3)0.003 (3)
C190.034 (4)0.042 (4)0.068 (5)0.003 (3)0.016 (4)0.003 (4)
C200.029 (3)0.029 (3)0.032 (4)0.004 (3)0.015 (3)0.006 (3)
C210.035 (3)0.045 (4)0.040 (4)0.015 (3)0.022 (3)0.006 (3)
C220.031 (3)0.025 (3)0.041 (4)0.010 (3)0.019 (3)0.009 (3)
C230.048 (4)0.019 (3)0.074 (5)0.010 (3)0.003 (4)0.002 (3)
Geometric parameters (Å, º) top
Ni1—O52.014 (4)C5—H50.946 (7)
Ni1—O5i2.014 (4)C5—C61.376 (10)
Ni1—O1i2.036 (4)C6—H60.950 (7)
Ni1—O12.036 (4)C6—C71.383 (9)
Ni1—O2i2.138 (4)C8—H8b0.948 (8)
Ni1—O22.138 (4)C8—H8c0.952 (5)
Ni2—O12.035 (4)C8—H8a0.955 (9)
Ni2—O42.056 (3)C9—H9a0.951 (7)
Ni2—N22.073 (4)C9—H9b0.952 (4)
Ni2—O22.092 (4)C9—C101.521 (10)
Ni2—O62.099 (4)C10—H10c0.944 (7)
Ni2—N12.142 (5)C10—H10b0.951 (4)
O1—C71.348 (7)C10—H10a0.955 (7)
O2—C201.260 (9)C11—H11b0.945 (7)
O3—C201.254 (7)C11—H11a0.950 (6)
O4—C221.260 (5)C11—C121.482 (9)
O5—C221.245 (8)C13—C141.378 (9)
O6—H06a0.961 (5)C13—C181.421 (6)
O6—H06b0.998 (4)C14—H140.947 (5)
O7—H7a0.917 (5)C14—C151.391 (9)
O7—H7b0.922 (6)C15—H150.949 (8)
N1—C11.483 (8)C15—C161.402 (7)
N1—C91.490 (8)C16—H160.949 (6)
N1—C111.500 (5)C16—C171.375 (11)
N2—C121.310 (7)C17—H170.945 (5)
N2—C131.380 (8)C17—C181.390 (8)
N3—C181.368 (9)C19—H19b0.951 (6)
N3—C121.370 (6)C19—H19c0.953 (9)
N3—C191.472 (7)C19—H19a0.953 (8)
C1—H1a0.945 (7)C20—C211.507 (10)
C1—H1b0.954 (4)C21—H21c0.942 (5)
C1—C21.496 (9)C21—H21b0.950 (7)
C2—C31.393 (8)C21—H21a0.955 (7)
C2—C71.412 (8)C22—C231.506 (8)
C3—H30.955 (6)C23—H23c0.946 (5)
C3—C41.371 (9)C23—H23a0.949 (9)
C4—C51.389 (10)C23—H23b0.953 (8)
C4—C81.496 (10)
O5—Ni1—O5i180.0000C5—C6—C7120.4 (6)
O5—Ni1—O1i93.77 (15)O1—C7—C6123.9 (5)
O5—Ni1—O186.23 (15)O1—C7—C2117.3 (5)
O5—Ni1—O2i87.40 (15)C6—C7—C2118.8 (6)
O5—Ni1—O292.60 (15)H8b—C8—H8c109.4 (6)
O5i—Ni1—O1i86.23 (15)H8b—C8—H8a109.2 (8)
O5i—Ni1—O193.77 (15)H8b—C8—C4109.9 (7)
O5i—Ni1—O2i92.60 (15)H8c—C8—H8a108.8 (8)
O5i—Ni1—O287.40 (15)H8c—C8—C4109.9 (7)
O1i—Ni1—O1180.0000H8a—C8—C4109.6 (6)
O1i—Ni1—O2i80.99 (15)H9a—C9—H9b109.1 (6)
O1i—Ni1—O299.01 (15)H9a—C9—N1107.3 (6)
O1—Ni1—O2i99.01 (15)H9a—C9—C10108.3 (5)
O1—Ni1—O280.99 (15)H9b—C9—N1107.3 (5)
O2i—Ni1—O2180.0000H9b—C9—C10108.0 (6)
O1—Ni2—O491.58 (14)N1—C9—C10116.7 (5)
O1—Ni2—N292.33 (16)H10c—C10—H10b110.0 (7)
O1—Ni2—O282.14 (16)H10c—C10—H10a109.5 (7)
O1—Ni2—O6174.29 (18)H10c—C10—C9109.9 (5)
O1—Ni2—N194.44 (18)H10b—C10—H10a109.0 (5)
O4—Ni2—N2172.96 (18)H10b—C10—C9109.3 (6)
O4—Ni2—O288.72 (15)H10a—C10—C9109.1 (6)
O4—Ni2—O687.65 (15)H11b—C11—H11a110.0 (5)
O4—Ni2—N192.56 (17)H11b—C11—C12109.5 (6)
N2—Ni2—O297.61 (18)H11b—C11—N1109.7 (5)
N2—Ni2—O689.04 (16)H11a—C11—C12109.3 (6)
N2—Ni2—N181.30 (18)H11a—C11—N1109.4 (5)
O2—Ni2—O692.18 (17)C12—C11—N1109.0 (4)
O2—Ni2—N1176.38 (19)N2—C12—N3111.8 (5)
O6—Ni2—N191.25 (18)N2—C12—C11123.1 (4)
C7—O1—Ni2117.5 (3)N3—C12—C11125.0 (5)
C7—O1—Ni1135.6 (4)C14—C13—N2132.4 (4)
Ni2—O1—Ni198.05 (19)C14—C13—C18119.6 (5)
C20—O2—Ni2128.7 (3)N2—C13—C18108.1 (5)
C20—O2—Ni1137.6 (4)H14—C14—C13120.9 (6)
Ni2—O2—Ni193.17 (18)H14—C14—C15120.8 (7)
C22—O4—Ni2126.7 (4)C13—C14—C15118.3 (5)
C22—O5—Ni1130.5 (3)H15—C15—C14119.6 (5)
H06a—O6—H06b108.7 (4)H15—C15—C16119.3 (6)
H06a—O6—Ni289.0 (3)C14—C15—C16121.1 (7)
H06b—O6—Ni2112.5 (3)H16—C16—C17119.5 (5)
H7a—O7—H7b99.5 (4)H16—C16—C15118.6 (7)
C1—N1—C9109.9 (5)C17—C16—C15121.9 (6)
C1—N1—C11110.0 (4)H17—C17—C16121.6 (6)
C1—N1—Ni2106.6 (3)H17—C17—C18121.8 (7)
C9—N1—C11110.1 (4)C16—C17—C18116.6 (5)
C9—N1—Ni2112.1 (4)N3—C18—C17131.9 (5)
C11—N1—Ni2108.1 (4)N3—C18—C13105.7 (5)
C12—N2—C13107.0 (4)C17—C18—C13122.4 (6)
C12—N2—Ni2111.8 (4)H19b—C19—H19c109.2 (7)
C13—N2—Ni2141.1 (4)H19b—C19—H19a109.3 (6)
C18—N3—C12107.4 (4)H19b—C19—N3109.9 (7)
C18—N3—C19126.4 (5)H19c—C19—H19a109.0 (8)
C12—N3—C19126.2 (6)H19c—C19—N3109.7 (5)
H1a—C1—H1b109.6 (7)H19a—C19—N3109.7 (6)
H1a—C1—N1107.9 (5)O3—C20—O2122.7 (6)
H1a—C1—C2107.9 (6)O3—C20—C21118.4 (7)
H1b—C1—N1107.6 (5)O2—C20—C21118.9 (5)
H1b—C1—C2107.6 (5)H21c—C21—H21b110.1 (5)
N1—C1—C2116.1 (5)H21c—C21—H21a109.7 (7)
C3—C2—C7118.2 (5)H21c—C21—C20109.7 (6)
C3—C2—C1121.1 (6)H21b—C21—H21a109.1 (7)
C7—C2—C1120.5 (5)H21b—C21—C20109.0 (7)
H3—C3—C4118.7 (6)H21a—C21—C20109.3 (5)
H3—C3—C2117.8 (6)O5—C22—O4125.9 (5)
C4—C3—C2123.5 (6)O5—C22—C23116.8 (4)
C3—C4—C5116.5 (6)O4—C22—C23117.3 (6)
C3—C4—C8121.3 (6)H23c—C23—H23a110.0 (7)
C5—C4—C8122.2 (6)H23c—C23—H23b109.5 (7)
H5—C5—C6118.7 (7)H23c—C23—C22109.4 (7)
H5—C5—C4119.0 (7)H23a—C23—H23b109.3 (7)
C6—C5—C4122.4 (6)H23a—C23—C22109.5 (6)
H6—C6—C5120.4 (7)H23b—C23—C22109.2 (6)
H6—C6—C7119.2 (6)
Symmetry code: (i) x+1, y+1, z+1.

Experimental details

Crystal data
Chemical formula[Ni3(C18H22N3O)2(C2H3O2)4(H2O)2]·4H2O
Mr1137.15
Crystal system, space groupTriclinic, P1
Temperature (K)193
a, b, c (Å)11.130 (2), 11.732 (2), 12.258 (2)
α, β, γ (°)99.66 (2), 110.34 (1), 110.23 (1)
V3)1330.6 (5)
Z1
Radiation typeCu Kα
µ (mm1)1.83
Crystal size (mm)0.12 × 0.12 × 0.02
Data collection
DiffractometerRigaku AFC-6R
diffractometer
Absorption correctionψ scan
(North et al., 1968)
Tmin, Tmax0.873, 0.965
No. of measured, independent and
observed [F > 2.5σ(Fo)'] reflections
4152, 3940, 2872
Rint0.031
θmax (°)60.0
(sin θ/λ)max1)0.562
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.058, 0.047, 1.93
No. of reflections2865
No. of parameters322
H-atom treatmentH-atom parameters not refined
Δρmax, Δρmin (e Å3)0.64, 0.68

Computer programs: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1994), MSC/AFC Diffractometer Control Software, TEXSAN (Molecular Structure Corporation, 1992-1997), SIR92 (Altomare et al., 1994), Xtal3.4 CRYLSQ (Hall et al., 1995), Xtal3.4 BONDLA CIFIO.

 

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