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A complete cDNA for adenine phosphoribosyltransferase fromArabidopsis thaliana

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Abstract

An intact cDNA fromArabidopsis thaliana for adenine phosphoribosyltransferase (APRT) was isolated and sequenced. The cDNA is 729 nucleotides in length and predicts a protein ofM r 27140. The deduced amino acid sequence has been compared with those of other APRTs and shown to be most similar to theEscherichia coli protein. Construction of a molecular tree of the known APRT amino acid sequences indicates theA. thaliana andE. coli APRT sequences form one cluster and the currently available vertebrate and invertebrate sequences form a separate grouping. Since it is possible to select either for or against the expression of APRT, the isolation of this APRT cDNA clone will allow these selection schemes to be used in plant genetic experiments.

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References

  1. Arnold WJ, Kelley WN: Adenine phosphoribosyltransferase. Meth Enzymol 51: 568–574 (1978).

    PubMed  Google Scholar 

  2. Broderick TP, Schaff DA, Bertino AM, Dush MK, Tischfield JA, Stambrook PJ: Comparative anatomy of the human APRT gene and enzyme: Nucleotide sequence divergence and conservation of a nonrandom CpG dinucleotide arrangement. Proc Natl Acad Sci USA 84: 3349–3353 (1987).

    PubMed  Google Scholar 

  3. Dayhoff MO, Schwartz RM, Orcutt BC: A model of evolutionary change in proteins. In: Atlas of Protein Sequence and Structure, vol 5, suppl. 3 National Biomedical Research Foundation/M. O. Dayhoff, Washington, DC (1978).

    Google Scholar 

  4. Doolittle RF, Feng D-F: Nearest neighbor procedure for relating progressively aligned amino acid sequences. Meth Enzymol 183: 659–669 (1990).

    PubMed  Google Scholar 

  5. Dush MK, Sikela JM, Khan SA, Tischfield JA, Stambrook PJ: Nucleotide sequence and organization of the mouse adenine phosphoribosyltransferase gene: Presence of a coding region common to animal and bacterial phosphoribosyltransferases that has a variable intron/exon arrangement. Proc Natl Acad Sci USA 82: 2731–2735 (1985).

    PubMed  Google Scholar 

  6. Federoff N, Mauvais J, Chaleff D: Molecular studies on mutations at theShrunken locus in maize caused by the controlling elementDs. J Mol Appl Genet 2: 11–30 (1983).

    PubMed  Google Scholar 

  7. Feinberg AP, Vogelstein B: A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 137: 266–267 (1984).

    PubMed  Google Scholar 

  8. Feng D-F, Doolittle RF: Progressive alignment and phylogenetic tree construction of protein sequences. Meth Enzymol 183: 375–387 (1990).

    PubMed  Google Scholar 

  9. Haughn GW, Somerville CR: Sulfonylurea-resistant mutants ofArabidopsis thaliana. Mol Gen Genet 204: 430–434 (1986).

    Article  Google Scholar 

  10. Heidecker G, Messing J: Structural analysis of plant genes. Annu Rev Plant Physiol 37: 439–466 (1986).

    Google Scholar 

  11. Hein J: Unified approach to alignment and phylogenies. Meth Enzymol 183: 626–644 (1990).

    PubMed  Google Scholar 

  12. Hershey HV, Gutstein R, Taylor MW: Cloning and restriction map of theE. coli apt gene. Gene 19: 89–92 (1982).

    Article  PubMed  Google Scholar 

  13. Hershey HV, Taylor MW: Nucleotide sequence and deduced amino acid sequence ofEscherichia coli adenine phosphoribosyltransferase and comparison with other analogous enzymes. Gene 43: 287–293 (1986).

    Article  PubMed  Google Scholar 

  14. Hidaka Y, Tarlé SA, O'Toole TE, Kelley WN, Palella TD: Nucleotide sequence of the human APRT gene. Nucl Acids Res 15: 9086 (1987).

    PubMed  Google Scholar 

  15. Hochstadt-Ozer J, Stadtman ER: The regulation of purine utilization in bacteria. I. Purification of adenine phosphoribosyltransferase fromEscherichica coli K12 and control of activity by nucleotides. J Biol Chem 246: 5294–5303 (1971).

    PubMed  Google Scholar 

  16. Hunt AG, Chu NM, Odell JT, Nagy F, Chua N-H: Plant cells do not properly recognize animal gene polyadenylation signals. Plant Mol Biol 8: 23–35 (1987).

    Google Scholar 

  17. Johnson DH, Edstrom J-E, Burnett JB, Friedman TB: Cloning of aDrosophila melanogaster adenine phosphoribosyltransferase structural gene and deduced amino acid sequence of the enzyme. Gene 59: 77–86 (1987).

    Article  PubMed  Google Scholar 

  18. Kusano T, Long C, Green H: A new reduced human-mouse somatic cell hybrid containing the human gene for adenine phosphoribosyltransferase. Proc Natl Acad Sci USA 68: 82–86 (1971).

    PubMed  Google Scholar 

  19. Lahners K, Kramer V, Back E, Privalle L, Rothstein SJ: Molecular cloning of complementary DNA encoding maize nitrate reductase. Plant Physiol 88: 741–746 (1988).

    Google Scholar 

  20. Leutwiler LS, Hough-Evans BR, Meyerowitz EM: The DNA ofArabidopsis thaliana. Mol Gen Genet 194: 15–23 (1984).

    Google Scholar 

  21. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1982).

    Google Scholar 

  22. Moffatt BA, Pethe C, Laloue M: Metabolism of benzyladenine is impaired in a mutant ofArabidopsis thaliana lacking adenine phosphoribosyltransferase activity. Plant Physiol 95: 900–908 (1991).

    Google Scholar 

  23. Moffatt BA, Somerville CR: Positive selection for malesterile mutants ofArabidopsis thaliana lacking adenine phosphoribosyltransferase activity. Plant Physiol 86: 1150–1154 (1988).

    Google Scholar 

  24. Moffatt BA, Somerville CR: Purification of adenine phosphoribosyltransferase fromBrassica juncea. Arch Biochem Biophys 283: 484–490 (1990).

    PubMed  Google Scholar 

  25. Nalbantoglu J, Phear GA, Meuth M: Nucleotide sequence of hamster adenine phosphoribosyltransferase (aprt) gene. Nucl Acids Res 14: 1914 (1986).

    PubMed  Google Scholar 

  26. Okada G, Kaneko I, Koyama H: Purification and characterization of adenine phosphoribosyltransferase from mouse mammary carcinoma FM3A cells in culture. Biochim Biophys Acta 884: 304–310 (1986).

    PubMed  Google Scholar 

  27. Pearson WR, Lipman DJ: Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85: 2444–2448 (1988).

    PubMed  Google Scholar 

  28. Saitou N, Nei M: The nieghbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406–425 (1987).

    PubMed  Google Scholar 

  29. Sikela JM, Khan SA, Feliciano E, Trill J, Tischfield JA, Stambrook PJ: Cloning and expression of a mouse adenine phosphoribosyltransferase gene. Gene 22: 219–228 (1983).

    Article  PubMed  Google Scholar 

  30. Stambrook PJ, Dush MK, Trill JJ, Tischfield JA: Cloning of a functional human adenine phosphoribosyltransferase (APRT) gene: Identification of a restriction fragment length polymorphism and preliminary analysis of DNAs from APRT-deficient families and cell mutants. Somatic Cell Mol Genet 10: 359–367 (1984).

    PubMed  Google Scholar 

  31. Takayama KM, Inouye M: Antisense RNA. Crit Rev Biochem Biol 25: 155–184 (1990).

    Google Scholar 

  32. Tischfield JA, Ruddle FH: Assignment of the gene for adenine phosphoribosyltransferase to human chromosome 16 by mouse-human somatic cell hybridization. Proc Natl Acad Sci USA 71: 45–49 (1974).

    PubMed  Google Scholar 

  33. Wilson JM, O'Toole TE, Argos P, Shewach DS, Daddona PE, Kelley WN: Human adenine phosphoribosyltransferase. Complete amino acid sequence of the erythrocyte enzyme. J Biol Chem 261: 13677–13683 (1986).

    PubMed  Google Scholar 

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Moffatt, B.A., McWhinnie, E.A., Burkhart, W.E. et al. A complete cDNA for adenine phosphoribosyltransferase fromArabidopsis thaliana . Plant Mol Biol 18, 653–662 (1992). https://doi.org/10.1007/BF00020008

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