Skip to main content
Log in

A sequence variation in the human cystatin D gene resulting in an amino acid (Cys/Arg) polymorphism at the protein level

  • Published:
Human Genetics Aims and scope Submit manuscript

Abstract

A polymorphism in the coding region of the human cystatin D gene has been detected by direct sequencing of amplified DNA from different individuals. The variation, resulting from a T/C transition in exon 1 of the gene, causes an amino acid variation, Cys/Arg, at the protein level. An allele-specific oligonucleotide hybridization assay was developed and used to demonstrate this polymorphism in the population. The deduced frequencies were 0.55 and 0.45 for the Cys and Arg variant-encoding alleles, respectively.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Balbín M, Abrahamson M (1991) SstII polymorphic sites in the promoter region of the human cystatin C gene. Hum Genet 87:751–752

    Google Scholar 

  • Balbín M, Abrahamson M (1992) PCR assay for a polymorphic DdeI site in the promoter region of the human cystatin C gene. Hum Genet 88:710

    Google Scholar 

  • Balbín M, Abrahamson M, Gustafson L, Nilsson K, Brun A, Grubb A (1992) A novel mutation in the β-protein coding region of the amyloid β-protein precursor (APP) gene. Hum Genet 89:580–582

    Google Scholar 

  • Freije JP, Abrahamson M, Olafsson I, Velasco G, Grubb A, López-Otín C (1991) Structure and expression of the gene encoding cystatin D, a novel human cysteine proteinase inhibitor. J Biol Chem 266:20538–20543

    Google Scholar 

  • Freije JP, Pendás AM, Velasco G, Roca A, Abrahamson M, López-Otín C (1993) Localization of the human cystatin D gene to chromosome 20p11.21 by in-situ hybridization. Cytogenet Cell Genet (in press)

  • Henriksen RA, Mann KG (1988) Identification of the primary structural defect in the dysthrombin thrombin Quick I: substitution of cysteine for arginine-382. Biochemistry 27:9160–9165

    Google Scholar 

  • Palsdottir A, Jonsdottir S, Abrahamson M, Grubb A, Jensson O (1990) Three RFLPs at the 3′ end of the cystatin C gene, the disease gene in hereditary cystatin C amyloid angiopathy (HCCAA) in Iceland. Nucleic Acids Res 18:7471

    Google Scholar 

  • Rao VVNG, Schnittger S, Abrahamson M, Hansmann I (1991) Cystatin C (CST3), the candidate gene for the hereditary cystatin C amyloid angiopathy (HCCAA) maps to or close to human chromosome 20p11.22. Cytogenet Cell Genet 58:2029

    Google Scholar 

  • Weisgraber K, Innerarity TL, Mahley R (1982) Abnormal lipoprotein receptor-binding activity of the human E apoprotein due to cysteinearginine interchange at a single site. J Biol Chem 257:2518–2521

    Google Scholar 

  • Xie B, Wang W, Mahuran DJ (1992) A Cys 138-to-Arg substitution in the GM2 activator protein is associated with the AB variant form of GM2 gangliosidosis. Am J Hum Genet 50:1046–1052

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Balbín, M., Freije, J.P., Abrahamson, M. et al. A sequence variation in the human cystatin D gene resulting in an amino acid (Cys/Arg) polymorphism at the protein level. Hum Genet 90, 668–669 (1993). https://doi.org/10.1007/BF00202491

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00202491

Keywords

Navigation