Skip to main content
Log in

Rab7, a multifaceted GTP-binding protein regulating access to degradative compartments in eukaryotic cells

  • Focus on Cellular Biochemistry
  • Published:
Protoplasma Aims and scope Submit manuscript

Summary

Small GTPases of the Rab subfamily localise to the cytoplasmic face of distinct membrane compartments and act as regulators of intracellular membrane traffic and transport vesicle formation. Among them, Rab7 controls the delivery of internalised material into degradative compartments and the acquisition of lysosomal hydrolases. This activity shapes the endocytic pathway of every cell type. In addition, this general role may adjust to serve specific needs in multicellular organisms.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

CI-MPR:

cation-independent mannose 6-phosphate receptor

GAP:

GTPase-activating protein

GDS:

GDP-dissociation stimulator

GEF:

guanine nucleotide exchange factor

LDL:

lowdensity lipoprotein

References

  • Adessi C, Chapel A, Vinçon M, Rabilloud T, Klein G, Satre M, Garin J (1995) Identification of major proteins associated withDictyostelium discoideum endocytic vesicles. J Cell Sci 108: 3331–3337

    Google Scholar 

  • Alvarez-Dominguez C, Barbieri AM, Beron W, Wandinger-Ness A, Stahl PD (1996) Phagocytosed liveListeria monocytogenes influences Rab5-regulated in vitro phagosome-endosome fusion. J Biol Chem 271: 13834–13843

    Google Scholar 

  • —, Roberts R, Stahl PD (1997) InternalizedListeria monocytogenes modulates intracellular trafficking and delays maturation of the phagosome. I Cell Sci 110: 731–743

    Google Scholar 

  • Aubry L, Klein G, Martiel JL, Satre M (1993) Kinetics of endosomal pH evolution inDictyostelium discoideum amoebae. J Cell Sci 105: 861–866

    Google Scholar 

  • — —, Satre M (1997) Cytoskeletal dependence and modulation of endocytosis inDictyostelium discoideum amoebae. In: Meada Y, Inouye K, Takeuchi I (eds)Dictyostelium: a model system for cell and developmental biology. Universal Academy Press, Tokyo, pp 65–74

    Google Scholar 

  • Baron R, Neff L, Louvard D, Courtoy PJ (1985) Cell-mediated extracellular acidification and bone resorption: evidence for low pH in resorbing lacunae and localisation of 100 kD lysosomal membrane protein at the osteoclast ruffled border. J Cell Biol 101: 2210–2222

    Google Scholar 

  • Bottger G, Nadelkerken B, van der Sluijs P (1996) Rab4 and Rab7 define distinct nonoverlapping endosomal compartments. J Biol Chem 271: 29191–29197

    Google Scholar 

  • Brachvogel V, Neu M, Metcalf P (1997) Rab7: cristallization of intact and C-terminal truncated constructs complexed with GDP and GppNHp. Proteins 27: 210–212

    Google Scholar 

  • Brennwald P, Novick P (1993) Interactions of three domains distinguishing the Ras-related GTP-binding proteins Yptl and Sec4. Nature 362: 563–565

    Google Scholar 

  • Bucci C, Parton R, Mather I, Stunnenberg H, Simons K, Zerial M (1992) The small GTPase Rab5 functions as a regulatory factor in the early endocytic pathway. Cell 70: 715–728

    Google Scholar 

  • Buczynski G, Bush J, Zhang L, Rodriguez-Paris J, Cardelli J (1997) Evidence for a recycling role for Rab7 in regulating a late step in endocytosis and in retention of lysosomal enzymes inDictyostelium discoideum. Mol Biol Cell 8: 1343–1360

    Google Scholar 

  • Chavrier P, Gorvel JP, Stelzer E, Simons K, Gruenberg J, Zerial M (1991) Hypervariable C-terminal domain of rab proteins acts as a targeting signal. Nature 353: 769–772

    Google Scholar 

  • Cheon CI, Lee NG, Siddique ABM, Bal AK, Verma DPS (1993) Roles of plant homologs of Rablp and Rab7p in the biogenesis of the peribacteroid membrane, a subcellular compartment formed de novo during root nodule symbiosis. EMBO J 12: 4125–4135

    Google Scholar 

  • Cockroft S (1996) Phospholipid signaling in leukocytes. Curr Opin Hematol 3: 45–54

    Google Scholar 

  • Dermine JF, Scianimanico S, Desrosiers M, Méresse S, Descoteaux A, Desjardins M (1998) Inhibition of phagolysosome biogenesis byLeishmania donovani proceeds by the exclusion of Rab7 from phagosomes. Mol Biol Cell 9: 386a

    Google Scholar 

  • Desjardins M, Huber LA, Parton RG, Griffiths G (1994) Biogenesis of phagolysosomes proceeds through a sequential series of interactions with the endocytic apparatus. J Cell Biol 124: 677–688

    Google Scholar 

  • —, Nzala NN, Corsini R, Rondeau C (1997) Maturation of phagosomes is accompanied by changes in their fusion properties and size-selective acquisition of solute materials from endosomes. J Cell Sci 110: 2303–2314

    Google Scholar 

  • Dunn B, Stearns T, Botstein D (1993) Specificity domains distinguish the Ras-related GTPases Ypt1 and Sec4. Nature 362: 563–565

    Google Scholar 

  • Echard A, Jollivet F, Martinez O, Lacapere JJ, Rousselet A, Janoueix-Lerosey I, Goud B (1998) Interaction of a Golgiassociated kinesin-like protein with Rab6. Science 279: 580–585

    Google Scholar 

  • Feng Y, Wandinger-Ness A (1998) Rab7 and a phosphatidyl inositol 3-kinase coordinately regulate late endocytosis. Mol Biol Cell 9: 464a

    Google Scholar 

  • —, Press B, Wandinger-Ness A (1995) Rab7: an important regulator of late endocytic membrane traffic. J Cell Biol 131: 1435–1452

    Google Scholar 

  • Gyun Kim T, Kyoo Jang M, Ho Jeoung N, Sook Choi M, Bok SH, Kwak JW, Park YB (1998) Differentially expressed aortic genes in cholesterol-fed rabbits. Mol Cell 8: 324–329

    Google Scholar 

  • Jones AT, Mills IG, Scheidig AJ, Alexandrov K, Clague MJ (1998) Inhibition of endosome fusion by wortmannin persists in the presence of activated Rab5. Mol Biol Cell 9: 323–332

    Google Scholar 

  • Juvet LK, Berg T, Gjoen T (1997) The expression of endosomal Rab proteins correlates with endocytic rate in rat liver cells. Hepatology 25: 1204–1212

    Google Scholar 

  • Laezza C, Bucci C, Santillo M, Bruni CB, Bifulco M (1998) Control of Rab5 and Rab7 expression by the isoprenoid pathway. Biochem Biophys Res Commun 248: 469–472

    Google Scholar 

  • Laurent O, Bruckert F, Adessi C, Satre M (1998) In vitro reconstitutedDictyostelium discoideum early endosome fusion is regulated by Rab7 but proceeds in the absence of ATP-Mg2+ from the bulk solution. J Biol Chem 273: 793–799

    Google Scholar 

  • Lenhard JM, Mayorga L, Stahl PD (1992) Characterization of endosome-endosome fusion in a cell-free system usingDictyostelium discoideum. J Biol Chem 267: 1896–1903

    Google Scholar 

  • Li G, D'Souza-Schorey C, Barbieri MA, Roberts RL, Klippel A, Williams LT, Stahl PD (1995) Evidence for phosphatidylinositol 3-kinase as a regulator of endocytosis via activation of Rab5. Proc Natl Acad Sci USA 92: 10207–10211

    Google Scholar 

  • Lupashin VV, Waters MG (1997) t-SNARE activation through transient interaction with a rab-like guanosine triphosphatase. Science 276: 1255–1258

    Google Scholar 

  • Martinez O, Goud B (1998) Rab proteins. Biochim Biophys Acta 1404: 101–112

    Google Scholar 

  • Mayer A, Wickner W (1997) Docking of yeast vacuoles is catalyzed by the Ras-like GTPase Ypt7 after symmetric priming by Sec18p (NSF). J Cell Biol 136: 307–317

    Google Scholar 

  • Méresse S, Gorvel JP, Chavrier P (1995) The rab7 GTPase resides on a vesicular compartment connected to lysosomes. J Cell Sci 108: 3349–3358

    Google Scholar 

  • —, André P, Mishal Z, Barad M, Brun N, Desjardins M, Gorvel JP (1997) Flow cytometry sorting and biochemical characterization of the late endosomal rab7-containing compartment. Electrophoresis 18: 2682–2688

    Google Scholar 

  • Mukhopadhyay A, Barbieri AM, Funato K, Roberts R, Stahl PD (1997a) Sequential actions of Rab5 and Rab7 regulate endocytosis in theXenopus oocytes. J Cell Biol 136: 1227–1237

    Google Scholar 

  • —, Funato K, Stahl PD (1997b) Rab7 regulates transport from early to late endocytic compartments inXenopus oocytes. J Biol Chem 272: 13055–13059

    Google Scholar 

  • Neu M, Brachvogel V, Oschkinat H, Zerial M, Metcalf P (1997) Rab7: NMR and kinetics analysis of intact and C-terminal truncated constructs. Proteins 27: 204–209

    Google Scholar 

  • Nichols BJ, Ungermann C, Pelham HRB, Wickner W, Haas A (1997) Homotypic vacuolar fusion mediated by v- and t-SNAREs. Nature 387: 199–202

    Google Scholar 

  • Novick P, Zerial M (1997) The diversity of Rab proteins in vesicle transport. Curr Opin Cell Biol 9: 496–504

    Google Scholar 

  • Padh H, Juhyun H, Lavasa M, Steck TL (1993) A post-lysosomal compartment inDictyostelium discoideum. J Biol Chem 268: 6742–6747

    Google Scholar 

  • Palokangas H, Mulari M, Väänänen HK (1997) Endocytic pathway from the basal plasma membrane to the ruffled border membrane in bone-resorbing osteoclasts. J Cell Sci 110: 1767–1780

    Google Scholar 

  • Papini E, Satin B, Bucci C de Bernard M, Telford JL, Manetti R, Rappuoli R, Zerial M, Monteccuco C (1997) The small GTP-binding protein rab7 is essential for cellular vacuolation induced byHelicobacter pylori cytotoxin. EMBO J 16: 15–24

    Google Scholar 

  • Press B, Feng Y, Hoflack B, Wandinger-Ness A (1998) Mutant Rab7 causes the accumulation of cathepsin D and cation-independent mannose 6-phosphate receptor in a early endocytic compartment. J Cell Biol 140: 1075–1089

    Google Scholar 

  • Rabinowitz S, Horstmann H, Gordon S, Griffiths G (1992) Immunocytochemical characterization of the endocytic and phagosomal compartments in peritoneal macrophages. J Cell Biol 116: 95–112

    Google Scholar 

  • Rezabeck B, Rodriguez-Paris J, Cardelli J, Chia C (1997) Characterization of phagosomal proteins inDictyostelium discoideum. J Eukaryot Microbiol 44: 284–292

    Google Scholar 

  • Rothman JE, Söllner T (1997) Throttles and dampers: controlling the engine of membrane fusion. Science 276: 1212–1213

    Google Scholar 

  • Roy CR, Berger KH, Isberg RR (1998)Legionella pneumophila DotA protein is required for early phagosome trafficking decisions that occur within minutes of bacterial uptake. Mol Microbiol 28: 663–674

    Google Scholar 

  • Rupper A, Rodriguez-Paris J, Grove B, Cardelli J (1998) P110-related PI 3-kinases regulate phagosome-phagosome fusion, phagosomal pH and delivery of cystein proteinases to phagosomes inDictyostelium. Mol Biol Cell 9: 463a

    Google Scholar 

  • Salo J, Lehenkari P, Mulari M, Metsikkö K, Väänänen HK (1997) Removal of osteoclast bone resorption products by transcytosis. Science 276: 270–273

    Google Scholar 

  • Schimmöller F, Riezman H (1993) Involvement of Ypt7, a small GTPase, in traffic from late-endosome to the vacuole in yeast. J Cell Sci 106: 823–830

    Google Scholar 

  • —, Simon I, Pfeffer SR (1998) Rab GTPases, directors of vesicle docking. J Biol Chem 273: 22161–22164

    Google Scholar 

  • Singer-Krüger B, Stenmark H, Zerial M (1995) Yeast Ypt51 and mammalian Rab5: counterparts with similar function in the early endocytic pathway. J Cell Sci 108: 3509–3521

    Google Scholar 

  • Soldati T, Rancano C, Geissler H, Pfeffer SR (1995) Rab7 and Rab9 are recruited onto late endosomes by biochemically distinguishable processes. J Biol Chem 270: 25541–25548

    Google Scholar 

  • Stenmark H, Valencia A, Martinez O, Ullrich O, Goud B, Zerial M (1994) Distinct structural elements of rab5 define its functional specificity. EMBO J 13: 575–583

    Google Scholar 

  • Stryer L (1995) Biochemistry, 4th edn. Freeman, New York

    Google Scholar 

  • Swanson JA, Watts C (1995) Macropinocytosis. Trends Cell Biol 5: 424–428

    Google Scholar 

  • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673–4680

    Google Scholar 

  • Thilo L, Vogel G (1980) Kinetics of membrane internalization and recycling during pinocytosis inDictyostelium discoideum. Proc Natl Acad Sci USA 77: 1015–1019

    Google Scholar 

  • Ungermann C, Wickner W (1998) Varn7p, a vacuolar SNAP-25 homolog, is required for SNARE complex disassembly, docking and fusion. EMBO J 17: 3269–3276

    Google Scholar 

  • —, Sato K, Wickner W (1998) Defining the functions of trans-SNARE pairs. Nature 396: 543–548

    Google Scholar 

  • van der Sluijs P, Hull M, Webster P, Goud B, Mellman I (1992) The small GTP-binding protein Rab4 controls an early sorting event on the endocytic pathway. Cell 70: 729–740

    Google Scholar 

  • Via LE, Deretic D, Uler RJ, Hibler NS, Huber LA, Deretic V (1997) Arrest of mycobacterial phagosome maturation is caused by a block in vesicle fusion between stages controlled by rab5 and rab7. J Biol Chem 272: 13326–13331

    Google Scholar 

  • Vitelli R, Santillo M, Lattero D, Chiariello M, Bifulco M, Bruni C, Bucci C (1997) Role of the small GTPase Rab7 in the late endocytic pathway. J Biol Chem 272: 4391–4397

    Google Scholar 

  • von Mollard GF, Nothwehr SF, Stevens TH (1997) The yeast v-SNARE Vtilp mediates two vesicle transport pathways through interactions with the t-SNAREs Sed5p and Pep12p. J Cell Biol 137: 1511–1524

    Google Scholar 

  • Wallace RA, Opresko L, Wiley HS, Selman K (1983) The oocyte as an endocytic cell. Ciba Found Symp 98: 228–248

    Google Scholar 

  • Weber T, Zemelman BV, McNew JA, Westermann B, Gmachl M, Parlati F, Söllner TH, Rothman JE (1998) SNAREpins: minimal machinery for membrane fusion. Cell 92: 759–772

    Google Scholar 

  • Wichmann H, Hengst L, Gallwitz D (1992) Endocytosis in yeast: evidence for the involvement of a small GTP-binding (Ypt7p). Cell 71: 1131–1142

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Bruckert, F., Laurent, O. & Satre, M. Rab7, a multifaceted GTP-binding protein regulating access to degradative compartments in eukaryotic cells. Protoplasma 210, 108–116 (2000). https://doi.org/10.1007/BF01276850

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01276850

Keywords

Navigation