Skip to main content
SpringerLink
Log in

An analysis of base frequencies in the anti-sense strands corresponding to the 180 human protein coding sequences

  • Published:
Amino Acids Aims and scope Submit manuscript

Summary

Can the anti-sense chain of DNA encode for a protein? Such a problem has been explored by means of the codon-analyzing graph developed recently.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Log in via an institution

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • Aota S, Gojobori T, Ishibashi F, Maruyama T, Ikemura T (1988) Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res 16 [Suppl]: r315-r402

    Google Scholar 

  • Chou KC, Zhang CT (1992) Diagrammatization of codon usage in 339 human immunodeficiency virus proteins and its biological implication. AIDS Res Hum Retroviruses 12: 1967–1976

    Google Scholar 

  • Maruyama T, Gojobori T, Aota S, Ikemura T (1986) Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res 14 [Suppl]: r151-r197

    Google Scholar 

  • Trifonov EN (1987) Translation framing code and frame-monitoring mechanism as suggested by the analysis of mRNA and 16 S rRNA nucleotide sequences. J Mol Biol 194: 643–652

    Google Scholar 

  • Wata K, Wata Y, Doi H, Ishibashi F, Gojobori T, Ikemura T (1991) Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res 19 [Suppl]: r1981-r1986

    Google Scholar 

  • Zhang CT, Chou KC (1994) A graphic approach to analyzing codon usage in 1562 E. Coli protein coding sequences. J Mol Biol 238: 1–8

    Google Scholar 

  • Zhang CT, Zhang R (1991) Analysis of distribution of bases in the coding sequences by a diagrammatic technique. Nucleic Acids Res 19: 6313–6317

    Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Department of Physics, Tianjin University, 300072, Tianjin, China

    C. -T. Zhang

  2. Computer-Aided Drug Discovery, Upjohn Laboratories, 49001-4940, Kalamazoo, MI, USA

    K. -C. Chou

Authors
  1. C. -T. Zhang
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. K. -C. Chou
    View author publications

    You can also search for this author in PubMed Google Scholar

Rights and permissions

Reprints and permissions

About this article

Cite this article

Zhang, C.T., Chou, K.C. An analysis of base frequencies in the anti-sense strands corresponding to the 180 human protein coding sequences. Amino Acids 10, 253–262 (1996). https://doi.org/10.1007/BF00807327

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00807327

Keywords

Search

Navigation