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  • Articles: DFG German National Licenses  (2)
  • AM1  (1)
  • Antitumor agents  (1)
  • 1
    ISSN: 0948-5023
    Keywords: Keywords Human Carbonic Anhydrase II ; Semiempirical MO Theory ; AM1 ; Enzyme Catalysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The approach of CO2 to a series of active site model complexes of human carbonic anhydrase   II (HCAII) and its catalytic hydration to bicarbonate anion have been investigated using semiempirical MO theory (AM1). The results show that direct nucleophilic attack of zinc-bound hydroxide to the substrate carbon occurs in each model system. Further rearrangement of the bicarbonate complex thus formed via a rotation-like movement of the bicarbonate ligand can only be found in active site model systems that include at least one additional water molecule. Further refinement of the model complex by adding a methanol molecule to mimic Thr-199 makes this process almost activationless. The formation of the final bicarbonate complex by an internal (intramolecular) proton transfer is only possible in the simplest of all model systems, namely {[Im3Zn(OH)]+·CO2}. The energy of activation for this process, however, is 36.8 kcal·mol−1 and thus too high for enzymatic catalysis. Therefore, we conclude that within the limitations of the model systems presented and the level of theory employed, the overall mechanism for the formation of the bicarbonate complex comprises an initial direct nucleophilic attack of zinc-bound hydroxide to carbon dioxide followed by a rotation-like rearrangement of the bicarbonate ligand via a penta-coordinate Zn2+ transition state structure, including the participation of an extra active site water molecule.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Berichte der deutschen chemischen Gesellschaft 130 (1997), S. 1551-1555 
    ISSN: 0009-2940
    Keywords: Antitumor agents ; Nucleotides ; Palladium ; Hydrogen bonds ; Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The compound [Pd(en)(5′-IMP-N7)2].11 H2O, where 5′-IMP = inosine 5′-monophosphate, crystallizes in the tetragonal space group P4322 with the unit cell parameters: a = b = 12.060(5) and c = 28.510(5) Å, V = 4147(3) Å3, Z = 4. A head-to-tail orientation with A configuration is observed for the nucleotides which are coordinated through the N(7) positions such that d[Pd-N(7)] = 2.053(8) Å. The sugar moieties exhibit anti orientations toward the purine bases while their pukkers adopt C(3)′-endo conformation. The overall conformation about the phosphate backbone is gauche+. Intramolecular hydrogen bonding is observed between the phosphates and the NH groups of the en ligand with a donor-acceptor distance of 2.88 Å. The coordination mode of the solid-state structure is shown to be identical to that observed by 1H-NMR spectroscopy in solution under slightly acidic conditions, where the N (l) positions of the nucleotides are protonated. The results are discussed in reference to closely related systems reported in the literature with emphasis on the importance of hydrogen bonding in such complexes.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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