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  • 1995-1999  (228)
  • 1960-1964
  • 1900-1904
  • Theoretical, Physical and Computational Chemistry  (228)
  • 1
    Electronic Resource
    Electronic Resource
    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 9 (1996), S. 398-402 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The kinetics of complex formation between Pd(H2O)42+ and S-carboxymethyl-L-cysteine (SCMCH2) was investigated in the presence of sodium dodecyl sulphate in the acidity range between 2 M HClO4 and pH 5. Although the mechanism was not affected by the presence of anionic micelles, retardation (2·2 〈 pH 〈 5) and acceleration (pH 〈 2·2) of the complex formation were observed compared with its rate in aqueous solution. These effects were interpreted in terms of the long-range electrostatic interactions between the negatively charged micellar surface and ligand species which can be in different ionic forms depending on the pH.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 9 (1996), S. 552-560 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: N-Chloroamino acids are unstable in aqueous solution and decompose through different pathways depending on the reaction conditions, yielding precursors of carcinogenic and/or mutagenic compounds. One of these pathways is a 1,2-elimination process, which has scarcely received any attention and for which no systematic analysis is available. The process is first order relative to the N-chloroamino acid and to that of hydroxide ion. The use of 2,2,2-trifluoroethanol and 1,1,1,3,3,3-hexafluoropropan-2-ol buffer solutions established that the process is general-base catalysed. The reaction rate is affected by the presence of a methyl group on the nitrogen atom and the nature of the leaving group. The results show an important steric effect due to the alkyl substituents on the α-carbon. With bulky alkyl substituents on the α-carbon, and in particular in the case of N-alkylamino acids, the catalytic effect increases as the base strength decreases. To characterize the transition state, Brønsted's β and βlg were used. A More O'Ferrall-Jencks diagram shows the transition state structure changing from carbanion-like to nitrenium-like, a large perpendicular effect being evident. The reaction proceeds through a concerted mechanism AxhDHDN instead of the stepwise AxhDH
    Additional Material: 7 Ill.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 61 (1997), S. 405-414 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Density functional calculations are reported for the molecular structures, harmonic vibrational frequencies, UV/visible spectra, and oxo-transferability of MoO2X2 (X = F, Cl, Br, I). Available experimental data have been used to check the validity of the theoretical calculations. Given the good agreement between theory and gas-phase experiment, predictions have been issued for the less studied members of this family of compounds. Furthermore, electronic spectra of the full series have been computed for the first time. For all transitions studied, excitation energies decrease in the order F 〉 Cl 〉 Br 〉 I. Finally, the labilization of Mo(SINGLE BOND)O bonds generated by the HOMO(SINGLE BOND)LUMO transition, which is related to the oxygen-atom transfer reaction in the active site of molybdenum oxidoreductases, was also investigated. For MoO2Cl2 and MoO2Br2 compounds, the HOMO-LUMO transition yields a considerable lengthening of the Mo(SINGLE BOND)O bond, yet not requiring a large excitation energy. © 1997 John Wiley & Sons, Inc.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 69 (1998), S. 341-348 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio density functional calculations for NanPb, LinPb, NanPb4, and LinPb4 are reported. The abundance of Na6Pb observed in gas-phase experiments is explained as a consequence of evaporative cooling, which stops at Na6Pb because of the high evaporation energy of this cluster. Insight is also provided into the clustering in the liquid Li-Pb and Na-Pb alloys. Anomalies in several electronic, structural, and thermodynamic properties were detected at certain compositions (20% Pb in Li-Pb; 20% Pb and 50% Pb in Na-Pb) and our calculations support the interpretation of those anomalies in terms of the formation of octet and Zintl clusters.   © 1998 John Wiley & Sons, Inc. Int J Quant Chem 69: 341-348, 1998
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 66 (1998), S. 31-45 
    ISSN: 0020-7608
    Keywords: magnetic susceptibility ; magnetic shielding tensor ; gauge invariance ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A transformation of the transverse Coulomb vector potential was implemented to calculate molecular magnetic properties via the random-phase approximation (RPA) within the framework of a “longitudinal gauge.” In this gauge, the diamagnetic contribution to magnetic susceptibility is a tensor with equal diagonal components as in atoms, irrespective of molecular symmetry, whereas diagonal and average diamagnetic contributions to the nuclear magnetic shielding are the same as in the Coulomb gauge. Near-Hartree-Fock magnetic susceptibility and nuclear magnetic shielding tensors were evaluated for a set of small molecules, HF, H2O, NH3, and CH4, employing extended Gaussian basis sets. The peculiar features of the longitudinal gauge, and the fulfillment of a series of sum rules involving the virial operator, which must be satisfied to guarantee gauge invariance of total magnetic tensors, were exploited to check the degree of convergence of theoretical values and to estimate the corresponding Hartree-Fock limit for the properties.   © 1998 John Wiley & Sons, Inc. Int J Quant Chem 66: 31-45, 1998
    Additional Material: 15 Tab.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 19 (1998), S. 695-715 
    ISSN: 0192-8651
    Keywords: nucleic acid ; multivariate analysis ; Ramachandran plots ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A method to construct the equivalent of multidimensional Ramachandran plots for nucleic acids on the basis of singular value decomposition (SVD) is presented. For this purpose, a data matrix containing 244 DNA dinucleoside monophosphate steps, represented by nine torsion angles, was decomposed into a score and loading matrix. It is shown that biplots, containing both score points and loading vectors, provide a simple tool to interpret the principles of DNA class separation. Scores separate the data matrix into one A-DNA class, two different B-DNA classes, and one so-called crankshaft class. Loading vectors correlate torsion angles. The projections of scores on loading vectors indicate which torsion angles play a dominant role in DNA class separation. The results of the biplots are supported by (simple) physical interpretations. From a three-dimensional score space the nine original torsion angles can be reconstructed. Hence, the potential to create the multidimensional equivalent of a Ramachandran plot is available; that is, forbidden and accessible regions in the reduced space reflect these same regions in the nine-dimensional original space.   © 1998 John Wiley & Sons, Inc.   J Comput Chem 19: 695-715, 1998
    Additional Material: 12 Ill.
    Type of Medium: Electronic Resource
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  • 7
    ISSN: 0894-3230
    Keywords: Cyclic N-substituted sulfonamides ; 1,2,5-thiadiazole 1,1-dioxide derivatives ; hydrolysis ; kinetics ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The hydrolysis reactions of 4-amino-2-phenethyl- and 4-amino-2-cyclohexyl-2,3-dihydro-3-oxo-1,2,5-thiadiazole 1,1-dioxide (Ia and Ib) were investigated in the range 24-73 °C in buffered aqueous solutions. The observed rate constants (kobs) are independent of pH in the range ca 1-4 pH, but increase with increase in pH above ca 4. A linear log kobs vs pH profile with unit slope is observed from pH ca 4 up to the highest experimental pH (ca 10). The products are the corresponding new compounds: 2-amino-2-[(N-substituted-sulfamoyl)imino]acetic acid salts. The C=N bond of these compounds hydrolyses further, in a slow reaction, to the sulfamide and oxalic acid derivatives. The substrates decompose to the final products without accumulation of the acetic acid derivatives under these experimental conditions. A mechanism is proposed. Rate constants and activation parameters are given for the first reaction step. Owing to steric effects, the reaction rate is higher for the N-phenethyl-substituted derivative than for the 2-cyclohexyl-substituted derivative. © 1998 John Wiley & Sons, Ltd.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The kinetics of the reaction between 1-chloro-2,4-dinitrobenzene and piperidine was studied in several completely non-aqueous binary solvent mixtures where the preferential solvation is the rule at 15, 25 and 40°C. The reaction was chosen as the simplest example of aromatic nucleophilic substitutions (ANS). For (aprotic solvent + aprotic co-solvent) binary systems the co-solvent was toluene, and the rest of the solvents used were selected with different structural characteristics and an extensive range of polarity. In this kind of mixture a property of mixed binary solvents would be defined by means of ET(30) values and the solvent effects on this simple model of ANS reactions are similar to those of aprotic pure solvents, especially if hydrogen-bond donor solvent mixtures are excluded from the analysis. For (aprotic solvent + protic co-solvent) binary systems the co-solvent used was methanol. The presence of a protic solvent in the mixture strongly determines the solvent effects on the reaction. In this type of binary mixture, the chemical probe under consideration may not be generally valid to interpret solvation effects. Additionally, empirical solvent polarity parameters ET(30) were determined UV-VIS spectrophotometrically for some pure aprotic solvents and, as a function of the composition, for (dimethylformamide + toluene), (toluene + methanol) and (1,1,1-trichloroethane + methanol) at 15 and 40°C, with the purpose of extending the studies on the empirical polarity indices in binary solvent mixtures to the thermo-solvatochromic area.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 0894-3230
    Keywords: proton binding ; zinc ion binding ; transition states ; α-heterocyclic ketones ; tautomerization ; enzymatic reactions ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The description of catalysis in terms of binding of a catalyst to the transition state propoposed by Kurz is applied to tautomerization of the α-heterocyclic ketones phenacylpyridine, phenacylpyrazine, phenacylphenanthroline and phenylacetylpyridine catalysed by protons and zinc ions. Binding constants for protonated and zinc-coordinated transition states, KB≠ are reported and Brønsted coefficients are calculated from comparison of KB≠ with binding constants for the keto reactant and enolate anion intermediate. The formal equivalence of the binding formalism to a conventional Brønsted analysis is emphasized, and the results are compared with those from a ‘generalised’ Brønsted plot of rate constants against equilibrium constants for reactions of uncomplexed, protonated and zinc ion-coordinated ketones. This plot confirms that intrinsic reactivities of metal-coordinated and protonated substrates are similar even where differences exist between substrates. Application of a comparable Kurz-Brønsted treatment to enzymatic reactions depends in principle upon (a) dissecting binding contributions to catalysis from approximation of covalently reacting groups and (b) separating binding at the reaction site of the substrate, to which Kurz's treatment applies, from ‘remote’ binding, which, to a first approximation, is unchanged between Michaelis complex and transition state. The Brønsted relationship highlights stabilization of reactive intermediates as a thermodynamic driving force for binding catalysis at the reaction site. A formal expression which describes this stabilization, and also accommodates stabilization by remote binding of the substrate and intermediate by the enzyme, is proposed. Its relationship to the usual expression for application of the Kurz approach to enzyme catalysis, (kcat/k0)/Km = KB≠, is discussed and the usefulness of the Brønsted and Marcus relationships for interpreting KB≠ is emphasized. © 1998 John Wiley & Sons, Ltd.
    Additional Material: 5 Ill.
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  • 10
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The product ion distributions and rates of the gas-phase reactions of two series of (radical) anions with chloro- and bromomethanes (CH3Cl, CH2Cl2, CHCl3, CCl4, CH3Br, CH2Br2, CHBr3 and CBr4) were determined with the use of Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometry. The first series consists of anions (HO-, CH3O-, C2H5O-, C3H7O- and CH3S-), for which the corresponding neutral radicals have a relatively high electron affinity (EA 〉 150 kJ mol-1). The second series consists of (radical) anions (CH2S-·, CH2(DOUBLE BOND)CHCH2-, CH2(DOUBLE BOND)C(CH3)CH2-, C6H4-· and C6H5-), for which the corresponding neutral species have a relatively low electron affinity (EA ≤ 100 kJ mol-1). These (radical) anions react mainly with the halomethanes to afford (i) halide ions, (ii) halomethyl anions with the same number of halogen atoms as in the parent halomethane and (iii) halomethyl anions with one halogen atom less than the parent substrate. The last process involves nucleophilic attack on a halogen atom and is particularly important in the reactions with substrates containing three or four halogen atoms. The halide ions may arise by a number of different pathways, such as SN2 substitution, α-elimination, halogen attack followed by dissociation of the thus formed halomethyl anion and overall dissociative electron transfer. The SN2 process is held responsible for the formation of halide ions in the reactions with monohalomethanes, whereas α-elimination is likely to be of importance only for the reactions with trichloro- and tribromomethanes. Attack on a halogen atom followed by dissociation of the ion generated initially is likely to be important if CCl4 or CBr4 is the substrate. Electron transfer is only a dominant pathway in the reactions of the CH2S-· ion with the halomethanes. The occurrence of electron transfer in the reactions of this ion with CHCl3, CCl4 and CHBr3 is evidenced by the formation of minor amounts of stable halomethane radical anions in addition to the generation of CH2SCl- or CH2SBr- ions and abundant halide ions. The interplay between the various possible reactions is discussed on the basis of thermodynamic considerations and the rates of the overall processes.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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