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  • 1995-1999  (4)
  • Endarteritis  (2)
  • Aranaea  (1)
  • Bootstrap  (1)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Journal of molecular evolution 41 (1995), S. 1128-1138 
    ISSN: 1432-1432
    Keywords: Phylogeny ; Neighbor joining method ; Bootstrap ; Optimal size ; Optimal position ; Nonrandom sequence ; Information ; Foot-and-mouth disease virus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The availability of fast and accurate sequencing procedures along with the use of PCR has led to a proliferation of studies of variability at the molecular level in populations. Nevertheless, it is often impractical to examine long genomic stretches and a large number of individuals at the same time. In order to optimize this kind of study, we suggest a heuristic procedure for detection of the shortest region whose informational content can be considered sufficient for significant phylogenetic reconstruction. The method is based on the comparison of the pairwise genetic distances obtained from a set of sequences of reference to those obtained for different windows of variable size and position by means of a simple index. We also present an approach for testing whether the informative content in the stretches selected in this way is significantly different from the corresponding content shown by the larger genomic regions used as reference. Application of this test to the analysis of the VP1 protein gene of foot-and-mouth-disease type C virus allowed us to define optimal stretches whose informative content is not significantly different from that displayed by the complete VP1 sequence. We showed that the predictions made for type C sequences are valid for type O sequences, indicating that the results of the procedure are consistent.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    European journal of clinical microbiology & infectious diseases 17 (1998), S. 104-107 
    ISSN: 1435-4373
    Keywords: Key words Actinobacillus actinomycetemcomitans ; Endarteritis ; Aneurysm ; Clonal identity ; Periodontitis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract Actinobacillus actinomycetemcomitans was isolated from blood cultures of a 33-year-old febrile patient with a previously undiagnosed coarctation of the aorta. Subgingival samples from diseased periodontal pockets revealed the presence of A. actinomycetemcomitans. An infected (mycotic) aortic aneurysm and endarteritis were diagnosed and surgically treated. The identity of blood and oral clinical isolates of A. actinomycetemcomitans was supported by genetic analysis, including fingerprinting by restriction fragment length polymorphism, ribotyping, and random amplified polymorphic DNA; biotyping; and antibiogram typing. These data strongly suggest that the periodontal pockets were the primary source of A. actinomycetemcomitans endarteritis in this case.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    European journal of clinical microbiology & infectious diseases 17 (1998), S. 104-107 
    ISSN: 1435-4373
    Keywords: Actinobacillus actinomycetemcomitans ; Endarteritis ; Aneurysm ; Clonal identity ; Periodontitis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract Actinobacillus actinomycetemcomitans was isolated from blood cultures of a 33-year-old febrile patient with a previously undiagnosed coarctation of the aorta. Subgingival samples from diseased periodontal pockets revealed the presence ofA. actinomycetemcomitans. An infected (mycotic) aortic aneurysm and endarteritis were diagnosed and surgically treated. The identity of blood and oral clinical isolates ofA. actinomycetemcomitans was supported by genetic analysis, including finger-printing by restriction fragment length polymorphism, ribotyping, and random amplified polymorphic DNA; biotyping; and antibiogram typing. These data strongly suggest that the periodontal pockets were the primary source ofA. actinomycetemcomitans endarteritis in this case.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1573-2932
    Keywords: Aranaea ; Carabidae ; CCA ; Diplopoda ; heavy metal ; invertebrates ; Opiliones ; pollution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Energy, Environment Protection, Nuclear Power Engineering
    Notes: Abstract Ground running invertebrates were sampled by pitfall trapping in woodlands with high and low aerial pollution by heavy metals. Principal component analysis calculated for the environmental variables showed degree of metal contamination to be the most important difference between the sites. Calculation of canonical correspondence analysis (CCA) for different groups of animals e.g. Diplopoda, Opiliones, Aranaea and Carabidae was carried out and produced plots which can be interpreted with respect to the pollution effect. The effect of different environmental factors on individual species or subgroups delimited by size, breeding season, diet etc. was determined. Species associating with or disassociating from high pollution levels can be identified. No clear patterns were shown when examining size or breeding season in Carabids in relation to pollution. The highly polluted woods near the main pollution source at Avonmouth are lacking in lycosid spiders, the vacant niche may be filled by a large species of ground running agelenid which may be more adaptable in habits than the lycosids. CCA plots of both Aranaea and all species pooled together show a triangular shape. This is interpreted as representing a small number of species able to adapt to high pollution levels and a larger potential number found at ’clean' sites.
    Type of Medium: Electronic Resource
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