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  • 1
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nature of internal and overall motions in native (double-stranded) and denatured (single-stranded) DNA fragments 120-160 base pairs (bp) long is examined by molecular-dynamics modeling using 13C-nmr spin-relaxation data obtained over the frequency range of 37-125 MHz. The broad range of 13C frequencies is required to differentiate among various models. Relatively narrow linewidths, large nuclear Overhauser enhancements (NOEs), and short T1 values all vary significantly with frequency and indicate the presence of rapid, restricted internal motions on the nanosecond time scale. For double-stranded DNA monomer fragments (147 bp, 24 Å diam at 32°C), the overall motion is that of an axially symmetric cylinder (τx = ∼10-6 s;τZ = ∼1.8 × 10-8s), which is in good agreement with values calculated from hydrodynamic theory (τx = ∼1.8 × 10-6 s; τZ = ∼2.7 × 10-8 s). The DNA internal motion can be modeled as restricted amplitude internal diffusion of individual C—H vectors of deoxyribose methine carbons C1′, C3′, and C4′, either with conic boundary conditions (τw = ∼4 × 10-9 s, θcone = ∼21°) or as a bistable jump (τA = τB = ∼2 × 10-9 s, θ = ∼15°). We discuss the critical role in molecular-dynamics modeling played by the angle (β) that individual C—H vectors make with the long axis of the DNA helix. Heat denaturation brings about increases in both the rate and amplitude of the internal motion (described by the wobble model with τW = ∼0.2 × 10-9 s, θcone = ∼50°), and overall motion is affected by becoming essentially isotropic (τx = τZ = ∼5 × 10-8 s) for the single-stranded molecules. Since 13C-nmr data obtained at various DNA concentrations for C2′ of the deoxyribose ring is not described well by the above models, a new model incorporating an additional internal motion is proposed to take into account the rapid, extensive, and weakly coupled motion of C2′.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Biopolymers 29 (1990), S. 1847-1862 
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: High-temperature molecular dynamics as a method for conformational search was explored on the antigen combining site of McPC 603, a phosphorylcholine binding immunoglobulin. Simulations at temperatures of 500, 800, and 1500 K were run for 111.5, 101.7, and 76.3 ps, respectively. The effectiveness of the search was assessed using a variety of methods. For the shorter hypervariable loops, molecular dynamics explored an appreciable fraction of the conformational space as evidenced by a comparison to a simple theoretical model of the size of the conformational space. However, for the longer loops and the antigen combining site as a whole, the simulation times were too short for a complete search. The simulations at 500 and 800 K both generated conformations that minimized to energies 200 kcal/mole lower than the crystal structure. However, the 1500 K simulation produced higher energy structures, even after minimization; in addition, this highest temperature run had many cis-trans peptide isomerizations. This suggests that 1500 K is too high a temperature for unconstrained conformational sampling. Comparison of the results of high temperature molecular dynamics with a direct conformational search method, [R. E. Bruccoleri & M. Karplus (1987) Biopolymers 26, 137-168]. showed that the two methods did not overlap much in conformational space. Simple geometric measures of the conformational space indicated that the direct method covered more space than molecular dynamics at the lower temperature, but not at 1500 K. The results suggest that high-temperature molecular dynamics can aid in conformational searches.
    Additional Material: 6 Ill.
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  • 3
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Helvetica Chimica Acta 63 (1980), S. 2302-2311 
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This paper deals with the problem of defining, and measuring, the pH inside the water pool (which we define as pHwp) of reverse micelles, i.e. micelles formed by surfactants dissolved in apolar solvents in the presence of minimal amounts of water. The conceptual and experimental difficulties are discussed, and it is argued that no absolute determination of pHwp is possible, mostly because water in the water pools of reverse micelles is a new solvent, for which no standardization of acidity is available. The problem can be approached only on the basis of an empirical acidity scale.An empirical acidity scale for water pools in reverse micelles of bis (2-ethyl-hexyl) sodium sulfosuccinate (AOT) in isooctane has been defined by measuring the 31P-chemical shifts of phosphate buffers. The chemical shifts in bulk water were compared to those found in reverse micelles under the assumption that the pK of phosphate ion is the same in the two systems. It was found that in most cases there was little difference (less than 0.4 pH units) between pHwp and the pH of the starting buffer in bulk water (which we define as pHst). However, this difference between pHwp and pHst may become much larger in certain cases.The difference (pHwp-pHst) is measured under a variety of conditions, and this permits the determination of an operational acidity in the micelle water pools as a function of the pHst with which the aqueous micelles are prepared. The significance of such data for interpreting the behaviour of enzymes confined in the micelles water pool is discussed. Based on the pHwp scale, the apparent pKa of phenol-red and 4-nitrophenol were determined in reverse micelles containing different buffers and different water content. The pKa values obtained were rather sensitive to changes of both these factors, which was taken to signify that organic dies have only a very limited applicability to measure the acidity of the water pools of reverse micelles.
    Additional Material: 5 Ill.
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  • 4
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Preparation and screening of twenty new ligands, all analogs of α,α,α′,α′-tetraaryl-1,3-dioxolane-4,5-dimethanol (TADDOL), for the Ti-catalyzed asymmetric addition of methyltri(isopropoxy)titanium and diethylzinc to benzaldehyde are described. These ligands have the dioxolane ring of the TADDOL's replaced by cyclobutane, cyclopentane, cyclohexene, cyclohexane, bicyclo[2.2.1]heptene and -heptane and bicyclo[2.2.2]octene and -octane moieties; several have H-atoms or alkyl groups in place of the aryl groups, and nine of them have C2 symmetry. X-Ray crystallography and molecular mechanics are used to analyze the structure of the ligands, and two structural features appear to correlate with selectivity: (i) the torsion angle for the chelating O-atom and the ortho-C-atom of the axial Ph group (a small, ca. 19°, angle is optimum, Fig.8) and (ii) the “degree of perpendicularity” of the axial Ph group (Fig. 9). Competition experiments indicate that TADDOL 1a catalyzes both the methyltitanium and diethylzinc additions ≥ 50 times faster than the related dioxolane analogs 12a, 12c, and 12e (Scheme 7), indicating that both axial and equatorial aryl groups (see Footnote 6) are necessary for ligand-accelerated catalysis of these reactions. A refined mechanistic hypothesis is presented (Fig. 10) to explain the selectivities observed for these new ligands. Our analysis suggests that a combination of structural features appear necessary for good catalytic efficiency and high selectivity. These features, especially the rather subtle conformational effects, appear to be optimized (among the ligands tested) in the TADDOL's.
    Additional Material: 10 Ill.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Stamford, Conn. [u.a.] : Wiley-Blackwell
    Polymer Engineering and Science 34 (1994), S. 1005-1010 
    ISSN: 0032-3888
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Brittle isotactic polystyrene has been toughened by the presence of emulsified rubber particles. Semicrystalline diblock copolymers of isotactic polystyrene and polybutadiene functioned successfully as emulsifying agents, as revealed by the results of scanning and transmission electron microscopy. Semiquantitative measures of the toughness of the various materials were obtained via a home-built micromechanical testing device. The minimum amount of copolymer required to achieve emulsified morphologies and significant toughness depended on the thermal history of the material being tested.
    Additional Material: 7 Ill.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Die Makromolekulare Chemie 181 (1980), S. 857-867 
    ISSN: 0025-116X
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The viscoelastic properties of poly(α,α-diethyl-β-propiolactone) were investigated in the linear range using stress relaxation and dynamic mechanical methods. Using Ferry's reduction method, a horizontal shift factor was determined at each temperature, that satisfactorily agreed with the WLF equation in the transition zone. No vertical shift was required to superimpose different relaxation curves. The apparent activation energy was temperature dependent and passed through a maximum near Tg whose value is (311 ± 2)K. The relaxation spectrum has been calculated according to the first method of approximation of Schwarzl and Staverman. It consists of a high intensity plateau at shorter times, a wedge type portion with a slope of -0,15 and a low intensity plateau at longer times. Dynamical mechanical measurements revealed a β relaxation peak at 333 K and yielded the evidence of a γ peak around 120 K.
    Additional Material: 9 Ill.
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Applied Polymer Science 27 (1982), S. 559-568 
    ISSN: 0021-8995
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Poly(caprolactone) (PCL) was blended with poly(chlorostyrene) (PSCI) and chlorinated polypropylene (PPCl). A single glass transition temperature Tg was found for these mixtures, indicating their miscibility. PCL crystallizes in these blends when the chlorinated polymer content is not too high. Otherwise, Tg becomes higher than the melting point of PCL and the high viscosity of the medium hinders the crystallization. The miscibility of PCL/PPCI blends cannot be due to hydrogen bonding between the α-hydrogens of the chlorinated polymer and the carbonyl group of the polyester since PPCI does not have available a large number of α-hydrogens. It is suggested that a dipoledipole —C=O…Cl—C— interaction is responsible for the observed miscibility phenomenon and that this interaction is probably also responsible for the miscibility between all other polyesterchlorinated polymer mixtures. Finally, it was observed that poly(α-methyl-α-n-propyl-β-propiolactone), poly(α-methyl-α-ethyl-β-propiolactone) and poly(valerolactone) are not miscible with PSCI or PPCl, despite the fact that they are miscible with poly(vinyl chloride).
    Additional Material: 7 Ill.
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Applied Polymer Science 29 (1984), S. 3499-3511 
    ISSN: 0021-8995
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: The kinetics of autoxidation of FM-73U, a rubber-modified epoxy adhesive, were investigated by Fourier transform infrared analysis. Absorbance spectra for thin samples aged in hot, moist, oxygen-rich environments were used to assess a plausible reaction mechanism; rate constants, Arrhenius plots, and oxidation rates were determined. Concurrently, crack growth rates were measured on specimens which had been exposed to similar environments for periods of up to 8 months. Paris parameters measured in these tests were correlated with the results of the oxidation studies. These correlations were used to predict the crack growth rate of the adhesive after 10 years of aging in ambient conditions. Although the prediction indicates that the adhesive becomes more brittle with age, the changes are not severe.
    Additional Material: 10 Ill.
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  • 9
    ISSN: 0021-8995
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Equilibrium acid concentrations, [Ae], were determined in butylene adipate and caprolactone polyesters, of low molecular weight, and in thermoplastic polyurethane elastomers based on these polyesters. Values of [Ae] of the polyesters at 85°C were 0.7, 1.3, and 3-4 × 10-3 mol/g at relative humidities (RH) of 25%, 50%, and 93%, respectively. [Ae] of the thermoplastic elastomers at 85°C were about 3 and 7 × 10-4 mol/g at 10% and 25% RH, respectively. Values of [Ae] were not very dependent on temperature at constant RH. Equilibrated thermoplastic elastomers had low molecular weights and poor physical properties. Consequently, equilibration does not set a practical limit on hydrolytic degradation, even at low RH. Equations were developed that described the variation in acid content with time. Rate constants for hydrolysis and esterification increased as RH decreased. Reesterification in the elastomers in the absence of water is too slow to be a useful method of decreasing hydrolytic damage.
    Additional Material: 9 Ill.
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  • 10
    Electronic Resource
    Electronic Resource
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 28 (1990), S. 2417-2426 
    ISSN: 0887-624X
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The use of 1,3-di(5-[2,2,1]-bicyclohexyl-2,3-dicarboxylic anhydride)-1,1,3,3-tetramethyldisiloxane, 1, as a curing agent in the presence of typical epoxy resins with Lewis bases as catalysts produces thermosets with HDTs of 320°C. The solubility of 1 in the epoxy resin allows for the preparation of a one-component formulation. A latent catalyst was developed which employs amine complexes of cobalt bis(2,4-pentanedionate). These formulations exhibit long term storage at ambient conditions, yet cure rapidly at 180-200°C.
    Additional Material: 2 Ill.
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