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  • 1
    Electronic Resource
    Electronic Resource
    Are mapped markers more useful for assessing genetic diversity? (2000)
    Springer
    Theoretical and applied genetics 100 (2000), S. 607-613 
    Details
    ISSN: 1432-2242
    Keywords: Key words AFLP ; Biodiversity ; Genetic maps ; Genetic resources ; Rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Genetic diversity within populations of organisms and species is commonly measured using molecular-marker data. It has been claimed that more reliable diversity measurements can be obtained using selected genetically mapped markers to ensure that all regions of the genome are represented in the data sets employed. However, this has not been tested. In the present study, using rice (Oryza sativa L.) as a model species, we have shown that the use of unmapped AFLP markers reveals a pattern of diversity that is very similar to that obtained using a range of other marker types and which reflects the known crossability groups within this species. In contrast, we show that use of mapped-marker data can, in some cases, result in highly misleading patterns of diversity; the results obtained are critically related to the choice ofparents used in the cross from which the mapping population was produced. For diversity analyses, we propose that it is appropriate to use unmapped markers provided that the marker-type has been shown to have a wide distribution over the genome.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050080
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    Paper (German National Licenses)
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  • 2
    Electronic Resource
    Electronic Resource
    The identification of duplicate accessions within a rice germplasm collection using RAPD analysis (1995)
    Springer
    Theoretical and applied genetics 90 (1995), S. 1049-1055 
    Details
    ISSN: 1432-2242
    Keywords: Oryza sativa ; Rice ; Genetic resources ; RAPD ; Molecular markers ; Cluster analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A set of accessions of Oryza sativa from the International Rice Research Institute (Philippines) that included known and suspected duplicates as well as closely related germplasm has been subjected to RAPD analysis. The number of primers, the number of polymorphic bands and the total number of bands were determined that will allow the accurate discrimination of these categories of accessions, including the identification of true and suspected duplicates. Two procedures have been described that could be employed on a more general basis for identifying duplicates in genetic resources collections, and further discussion on the values of such activities is presented.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00222920
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    Paper (German National Licenses)
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  • 3
    Electronic Resource
    Electronic Resource
    Linear and non-linear regression analysis of genotype X environment interactions in pearl millet (1988)
    Springer
    Theoretical and applied genetics 75 (1988), S. 736-740 
    Details
    ISSN: 1432-2242
    Keywords: Pennisetum typhoides (Burm.) S. & H ; Pearl milet ; Linear and non-linear regression analysis ; Genotype X environment interaction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Regression analysis was computed on the grain yield of 15 single cross F1 hybrids of pearl millet (Pennisetum typhoides (Burm.) S. & H.) evaluated in 20 environments at 19 sites in India to assess the nature of genotype X environment interactions. Linear, quadratic, cubic, twoand three-intersecting straight line models were examined for fit. The interactions of six hybrids viz. MH 110, MH 113, MH 114, MH 115, MH 120 and MBH 110 were explained by the linear regression model. The response of the remaining nine hybrids was largely non-linear. The two and three-intersecting straight line models fit better than the quadratic and cubic models and explained non-linearity of response. The two-intersecting straight line models fit for 6 hybrids MH 106, MH 107, MH 112, MH 116, MH 117 and BJ 104. The response of MH 109 was best explained by a three-intersecting straight line model, but there still existed a significant remainder variation. The truncation of environmental range by assuming moving division points was more efficient than the fixed division points for the segmental regression models. The stability of hybrid varieties on the best fitting model has been discussed.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00265597
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    Paper (German National Licenses)
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