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  • 1
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The x-ray structure of the hydrated ammonium salt of the deoxytetranucleotide d-pApTpApT was determined by Patterson and direct methods at a resolution of 1 Å. The crystal structure contains right-handed double-helical segments formed by complementary Watson-Crick-type hydrogen bonding between the adenine and thymine bases of neighboring molecules. The minihelix contains two base pairs. The chains are antiparallel. The A-T and T-A sequences have different phosphodiester conformations. The deoxyribose-pucker and the sugar-base orientation alternate along the chain depending on the nature of the base (3′-endo for purine and 2′-endo for pyrimidine). The extended structure is stabilized by base-base, base-sugar, and hydrogen-bond interactions. The minihelix of two base pairs provides starting coordinates for model-building studies of the dA-dT polymer. A B-DNA-type polymer structure is described, which has sequence-dependent alternations of both the deoxyribose pucker and the phosphate diester bridge conformation. Such sequence-dependent DNA structures, if present locally in regions such as operator sequences, could facilitate sequence-specific interactions. The crystal study also suggests possible geometrical parameters for the replication fork.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 0044-2313
    Keywords: Diphenoxyphosphorylchloride ; N′,N′-dialkyl-N-diphenoxyphosphoryl urea ; N-diphenoxyphosphoryl-N″,N″-dipropyl biuret ; X-ray crystal structure analysis ; n.m.r. spectra ; Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Reaction of Diphenoxyphosphorylchloride with N,N-disubstituted Ureas - Formation of Phosphorylated Biuret CompoundsN′,N′-disubstituted N-diphenoxyphosphorylureas, (PhO)2P(O)—NH—CO—NR1R2 (R1 = R2 = Et, 1; n-Pr, 2; n-Bu, 3; i-Bu, 4; R1 = Me and R2 = Ph, 5) as well as phosphorylated biuret compounds, (PhO)2P(O)—NH—CO—NH—CO—NR1R2 are obtained in the reaction of diphenoxyphosphorylchloride with N,N-disubstituted ureas and triethylamine. The biuret derivatives are formed via (PhO)2P(O)NCO. Their yield rises if the reaction is carried out without amine. The X-ray crystal structure analysis of (PhO)2P(O)—NH—CO—NH—CO—NPr2, 8, shows that dimers exist in the crystal with intermolecular as well as intramolecular hydrogen bonds. The framework formed by atoms P—N1—C1(O4)—N2—C2(O5)—N3(C3)C6 is planar. The existence of a rotation barrier along the bond C2-N3 was detected by NMR spectroscopy.
    Notes: Bei der Umsetzung von Diphenoxyphosphorylchlorid mit N,N-disubstituierten Harnstoffen in Gegenwart von Triethylamin treten neben N′,N′-disubstituierten N-Diphenoxyphosphorylharnstoffen, (PhO)2P(O)—NH—CO—NR1R2 (R1 = R2 = Et, 1; n-Pr, 2; n-Bu, 3; i-Bu, 4; R1 = Me u. R2 = Ph, 5), immer auch N″,N″-disubstituierte N-Diphenoxyphosphorylbiuret-Verbindungen, (PhO)2P(O)—NH—CO—NH—CO—NR1R2 auf. Sie entstehen über intermediär gebildetes (PhO)2P(O)NCO. Die Ausbeute an Biuretderivaten steigt, wenn ohne Aminzusatz gearbeitet wird. Die Röntgen-Kristallstrukturanalyse von (PhO)2P(O)—NH—CO—NH—CO—NPr2, 8, zeigt, daß im Kristall Dimere mit sowohl inter- als auch intramolekularen Wasserstoffbrücken vorliegen. Das Gerüst von 8 mit der Atomfolge P—N1—C1(O4)—N2—C2(O5)—N3(C3)C6 ist nahezu planar. NMR-Untersuchungen beweisen die Existenz einer Rotationsbarriere um die Bindung C2-N3.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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