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  • 1
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 112 (1990), S. 4151-4154 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 111 (1989), S. 2767-2772 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 94 (1991), S. 1030-1033 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: The kinetics of the photoreduction of acridine guest molecules in fluorene single crystals has been investigated theoretically. The abstraction has been modeled using the golden-rule approach and proceeds by vibrationally assisted tunneling. Parameter values have been taken from experimental data and from semiempirical force-field calculations. The calculated temperature and isotope effects are in good agreement with the experimental data for acridine and phenazine guests [B. Prass, J. P. Colpa, and D. Stehlik, J. Chem. Phys. 88, 191 (1988)]. While a fluorene lattice vibration is the likely promoting mode, NH wagging in the radical-pair product plays an essential role.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 102 (1995), S. 1561-1568 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Intensity distributions of electronic transitions in O2 and CO within a vibrational progression resulting from electron impact excitation are studied theoretically and experimentally. The multireference single- and double-excitation configuration interaction (MRD-CI) method is used to elucidate details of selected electronic transitions. In particular, the adiabatic MRD-CI approach can account for the variation of the Franck–Condon envelope with scattering angle that has been reported for the B 1Σ+←X 1Σ+ transition in CO and also was recently observed in the B' 3Σ−u←X 3Σ−g transition of O2. This behavior contrasts with the relative stability of the intensity distribution observed within the CO A 1Π←X 1Σ+ vibrational progression. In the former cases the excited state undergoes changes with internuclear separation because of the presence of an avoided crossing. Since a transition from the zeroth vibrational level in the ground electronic state to an individual vibrational level in the excited electronic state tends to select a particular internuclear distance (R centroid), each vibrational band may behave as a transition to a separate electronic level. This happens because the excited-state wave function undergoes a compositional change with internuclear separation between the adiabatic partners of the avoided crossing. © 1995 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 105 (1983), S. 7152-7161 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 105 (1983), S. 7161-7168 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Journal of computer aided molecular design 11 (1997), S. 345-356 
    ISSN: 1573-4951
    Keywords: p-Benzoquinone ; p-Benzoquinone imine ; p-Benzosemiquinone radicals ; 5-Iminodaunomycin ; Anthracyclines ; Adiabatic electron affinities ; Spin densities ; Density functional method (DFT) ; Hybrid Hartree–Fock/density functional ; B3LYP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Restricted and unrestricted (U) Hartree–Fock (HF), second-order Møller–Plesset perturbation (MP2), density functional (DF), hybrid HF/DF and semiempirical (half-electron (HE) method) models have been used to calculate adiabatic electron affinities (EAad values) of p- benzoquinone (I), p-benzoquinone imine (VI) and p-benzoquinone diimine (XI), as well as expectation values (〈S2〉) and spin density distributions in the radical anions of I, VI and XI. The AM1/AM1-HE and ab initio calculated structures are found to be in accord with each other. The ROHF/6-31G(d) method gave the poorest EAad result. The UHF and UMP2 wave functions were found to be substantially spin contaminated (for the radicals) and the accuracies of the EAad values calculated were also poor. The use of molecular energies obtained after spin annihilation did not lead to significant improvement of the UHF and UMP2 results. In contrast to the ROHF, UHF and UMP2 results, the DF(USVWN, UBVWN, UBLYP) and hybrid HF/DF(UB3LYP) methods, as well as the AM1-HE, gave much better results. The calculated EAad values decreased, as predicted by most of the models, in the order EAad(I) 〉 EAad(VI) 〉 EAad(XI). The differences in the EAs, EAad(I) − EAad(VI) and EAad(I) − EAad(XI), were consistently predicted to be about 8–9 and 17–18 kcal/mol, respectively, by the DF, B3LYP and AM1-HE models. The performance of the PM3 and SAM1 models was not as good as the AM1 model. Of all the methods tested, the B3LYP/6-311G(d,p) model is concluded to give the most accurate quantitative trend (I(42.6) 〉 VI(33.1) 〉 XI(23.7)) in EAad. The predicted trend in EA can satisfactorily be rationalized by the calculated LUMO orbital energies, atomic charges and spin density distributions. Analysis of the spin density data predicts that phenoxyl- and anilino-type radical anions predominate in the p-benzosemiquinones of I and XI, respectively, while both phenoxyl- and anilino-type radicals contribute to the structure of the p-benzosemiquinone of VI, with the anilino-type predominating.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 35 (1989), S. 181-191 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Quantum chemical studies (INDO-RHF-SCF) have been made for the resting state active sites of three closely related heme proteins, cytochrome c peroxidase (CCP), metmyoglobin (MMB), and catalase (CAT). The relative energies of the germane sextet, quartet, and doublet spin-states of each active site were calculated. Both CCP and MMB have similar heme units, consisting of an Fe(III)-protoporphyrin-IX with an imidazole and water as axial ligands. Our calculations show that the larger doming of the porphyrin, greater out-of-planarity of the iron, and the shorter iron-water distance in MMB leads to a sextet ground state with a low-lying quartet state. By contrast, the order of these two states is reversed in CCP, when a neutral imidazole is used as the endogenous axial ligand. An imidazolate ligand, on the other hand, which is an extreme representation of the H-bonding believed to occur in CCP with a nearby aspartate residue, leads to a sextet ground state with a low-lying quartet state. Assuming at least a partially anionic ligand in the intact protein, it follows that the quartet contribution to the ground state properties will be larger in CCP than in MMB. These predictions are consistent with the observed differences in the temperature-dependent magnetic susceptibility for these two proteins. The present results suggest that the experimentally observed Mössbauer resonance spectra of CCP should be reinterpreted in terms of sextet and quartet state contributions to the electric field gradient. Calculations for catalase, which has a single phenolate ligand, result in a sextet ground state with a low-lying quartet state consistent with available Mössbauer and magnetic susceptibility data. Our calculations of the Im- form of CCP show that it more closely resembles CAT. Thus, the effect of proton transfer in CCP can account at least in part for the similarities between CCP and CAT function. Minor differences in ground spin-state and electronic properties calculated for CCP and MMB, however, cannot explain why MMB does not have significant peroxidase activity. The different functions of MMB and CCP must then be due in part to other known differences in their protein environment such as polar residues around the distal ligand binding pocket of CCP, which are absent in MMB, and could help its transformation to an active oxidizing state.
    Additional Material: 5 Tab.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In heme proteins, the axial ligands bound directly to the iron are important modulators of biological function. A common spectroscopic technique used to detect the presence of heme units with oxygen-containing ligands, is the broadening of the electron spin resonance (ESR) spectrum by hyperfine interactions with unpaired spin density in 17O-enriched systems. To be useful as a means of identifying such ligands, there must be a measurable level of unpaired spin density on the oxygen ligand. In this study, we have used the semiempirical INDO/ROHF quantum mechanical method to calculate and compare the spin density localized on the axial oxygen ligand in the active site of four model heme proteins, Metmyoglobin, cytochrome c peroxidase (CCP), P450cam, and catalase. In particular, we have attempted to determine for which systems the results of such an experiment would be a reliable indicator of the presence of water or other types of oxygen-containing ligands. Using the MetMb system, for which such broadening has been observed, to determine a threshold value of spin density on the oxygen atom needed to detect broadening of the ESR spectra, we have found one-hundredth less spin on the water ligand in P450cam, thus explaining the observed lack of broadening in the ESR spectra of the low spin resting state. In addition, we predict that the catalase system would, in principle, exhibit 17O broadening of its ESR spectra but that CCP would not. Finally, given the similarity of CCP and HRP (horse radish peroxidase), our calculations suggest that the absence of broadening in the ESR spectra of HRP does not rule out the presence of water as a sixth ligand.
    Additional Material: 3 Tab.
    Type of Medium: Electronic Resource
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