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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Molecular genetics and genomics 251 (1996), S. 591-598 
    ISSN: 1617-4623
    Keywords: Escherichia coli ; ribA ; GTP cyclohydrolase II ; Oxidative stress ; soxRS regulon
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We isolated a promoter that is inducible by paraquat, a superoxide-generating agent, fromEscherichia coli using the promoter-probe plasmid pRS415. Sequence analysis revealed that the promoter derives from theribA gene encoding GTP cyclohydrolase II, which is the first enzyme in the biosynthetic pathway of riboflavin. We fused thelacZ gene with theribA promoter to monitor the expression of the gene in the single-copy state. LacZ expression from theribA promoter was induced about eight-fold by 200 µM paraquat. Other known superoxide generators, menadione and plumbagin, also induced the expression ofβ-galactosidase in the fusion strain. On the other hand, no significant induction was observed following treatment with hydrogen peroxide, ethanol or heat shock. Induction ofβ-galactosidase was significantly reduced by the introduction of a Δsox-8::cat orsoxS3::Tn10 mutation into the fusion strain, indicating that theribA gene is a member of thesoxRS regulon. The transcriptional start site was determined by primer extension analysis and putative binding sites for SoxS in both orientations were identified. GTP cyclohydrolase II activity in soluble extracts ofE. coli increased more than three-fold on treatment with paraquat. This increase was dependent on thesoxRS locus, and reflects the increase in transcript levels. However, flavin pools did not change significantly. A possible role forribA induction during superoxide stress is discussed.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Molecular genetics and genomics 261 (1999), S. 374-380 
    ISSN: 1617-4623
    Keywords: Key wordsEscherichia coli ; ribA ; GTP cyclohydrolase II ; SoxS binding ; RNA polymerase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The ribA gene, encoding GTP cyclohydrolase II in Escherichia coli, is a member of the soxRS regulon, which is induced by superoxide-generating agents. By evaluating lacZ expression driven by the ribA promoter carrying different lengths of upstream region in a monolysogen, we found that the superoxide-responsive element resides between 56 and 94 nucleotides upstream of the transcriptional start site. Purified SoxS protein bound to this region and protected nucleotides between positions −80 and −58 from degradation by DNase I. This region contains a putative SoxS-binding sequence (soxbox) in reverse orientation. The SoxS protein interacted specifically with four guanine residues within the soxbox sequence, as demonstrated by methylation interference analysis. These results clearly indicate that SoxS binds to the reversed soxbox sequence in the ribA gene, while in other known genes of the soxRS regulon it binds to the normally oriented soxbox. Possible modes of interaction between SoxS and RNA polymerase are discussed.
    Type of Medium: Electronic Resource
    Library Location Call Number Volume/Issue/Year Availability
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