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  • 1
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 113 (2000), S. 9523-9531 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Clusters consisting of two and three dimethylamine molecules were studied by using the HF, DFT/B3LYP, and MP2 ab initio methods in conjunction with the 6-31+G* and aug-cc-pvdz/cc-pvdz basis sets. Three different minima were located for the dimer, two of which form a N–H(centered ellipsis)N hydrogen bond and present similar interaction energies. The most stable structure of the dimer possesses Cs symmetry and an interaction energy of −15.6 kJ/mol. The least stable minimum has an interaction energy of −7.9 kJ/mol and exhibits no N–H(centered ellipsis)N hydrogen bonds (the interaction is established via the methyl hydrogen atoms). In all the structures, electron correlation exhibits a significant contribution (more than 40% of the overall energy). Only cyclic structures were considered for the trimer, the most stable of which possesses an interaction energy of −43.9 kJ/mol. The dipole moments for the dimer differ by up to 30% from the vector addition of the molecular dipoles (in the trimer minima, this difference amounts to 40%); also, N–H distances are lengthened by effect of the interaction (by up to 0.004 Å in the dimer and 0.009 Å in the trimer), which suggests the presence of cooperative phenomena. Nonadditive terms contribute about 12% of the overall interaction energy, the contribution being primarily of the inductive type. Calculations predict significant red shifts in the vibrational frequency of the N–H group when it takes part in the formation of a hydrogen bond. Similarly, the N–H wagging frequency undergoes a blue shift with hydrogen bonding. © 2000 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 112 (2000), S. 2155-2163 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Methylamine clusters consisting of up to four molecules were studied by employing Hartree–Fock, density functional theory, and Moller–Plesset calculations with the 6-31+G* basis set. The dimer was found to exhibit two minima with similar interaction energies (−13 kJ/mol) and involving a hydrogen bond. The dipole moment for the dimer differs by up to 20% from the vector addition of the dipole moments for the individual molecules by effect of the interaction; also, the N–H bond distance in the group involved in the hydrogen bond is lengthened by up to 0.006 Å as a result. The minima identified for the trimer and tetramer possess cyclic structures that differ in the position of the methyl groups with respect to the plane containing the hydrogen bonds. The contribution of nonadditivity to the interaction in these structures is quite significant (12%–18% of the overall interaction energy). N–H distances in the donor molecule are longer than in the dimer and increase with increasing cluster size. Likewise, the hydrogen bonding energy increases with cluster size. These results expose the significance of cooperative phenomena in the interactions between methylamine molecules. The computations predict slight shifts in the C–N stretching frequencies, which are consistent with their experimental counterparts. The N–H stretching and the NH2 wagging modes undergo large shifts, with a magnitude that increases as the size of the cluster grows. © 2000 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 110 (1999), S. 6782-6791 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: A potential function for describing interactions between formamide molecules is proposed. The function was developed from ab initio computed molecular properties and intermolecular perturbation theory (IMPT) calculations for formamide dimer involving the 6-311G** basis set. It consists of an electrostatic term that is a function of multipoles distributed over the atoms, an exponential repulsion term obtained by fitting results for the dimer, an induction contribution that is a function of atomic polarizabilities, and a dispersion term based on a London expression that is also dependent on atomic polarizabilities. The results obtained by applying the proposed function to formamide dimer are similar to those found at the MP2/6-311G** level; the function allows one to identify five structures corresponding to as many energy minima. Application of the function to larger clusters revealed that the most attractive minima correspond to planar structures, the most common structural pattern among which is that of the global minimum for the dimer. Based on cooperativeness data for the larger clusters, chained structures seemingly form stronger hydrogen bonds due to increased cooperativeness in interactions between molecules, which may account for the tendency of condensed phases of formamide to adopt open structures. © 1999 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 107 (1997), S. 2407-2414 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We studied the dynamics of intramolecular proton transfer in the glycolate anion, and of the analogous processes in the deuterated and tritiated derivatives, by means of variational transition state theory with various multidimensional semiclassical models of tunneling. Rate constants were obtained directly from MP2/6-31++G** ab initio results scaled so that the height of the barrier coincided with the value given by QCISD/6-31++G** calculations, 3.81 kcal/mol. In this kind of system, the effective barrier height can be significantly lower for the lighter isotope. Analysis of the kinetic isotope effects (kH/kD and kH/kT) showed them reduced by tunneling but favored by certain vibrational modes. © 1997 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 109 (1998), S. 8398-8406 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Potential functions for describing interactions between cyanoacetylene molecules based on ab initio determined molecular properties and IMPT calculations are proposed. Electrostatic interactions are described by a multipole expansion on atoms and midbond points; dispersion is expressed by a London-type function of atomic polarizabilities and induction is considered via a series of polarizabilities distributed over the atoms. The repulsion contribution was determined by using a test-particle model involving a helium atom as probe particle. Two functions based on two basis sets of different size, viz. 6-311G** and 5S4P2D/3S2P, were used. Cyanoacetylene dimer exhibits two minima corresponding to a linear and an antiparallel configuration, respectively. The proposed functions accurately reproduce the characteristics of the dimer minima as derived from ab initio calculations at the Møller–Plesset (MP2) level. In addition, they can describe cooperativeness in larger clusters; specifically, the dipole moment and interaction energy per molecule increase with increasing number of constituent units in the cluster. The behavior observed is similar to previously reported findings for HCN clusters. © 1998 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 108 (1998), S. 3598-3607 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: We developed potential functions for (HCN)2 and used them to study larger aggregates. The functions are based on ab initio perturbation calculations for the dimer and on molecular properties also estimated from ab initio calculations involving two different basis sets. The overall energy is resolved into electrostatic, repulsion, induction, and dispersion components. The electrostatic contribution is represented by a multipole expansion at several sites. The repulsion function is of the exponential type and includes atomic anisotropy. The dispersion is described by means of a London-type formula. Finally, the induction contribution is expressed in terms on polarizabilities distributed among the atoms. The proposed functions accurately reproduce the characteristics of the HCN dimer and the two minimum-energy forms of the trimer. Also, they predict various properties (e.g., the dependence of the dipole moment and interaction energy on cluster size) of larger aggregates. © 1998 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    The @journal of physical chemistry 〈Washington, DC〉 96 (1992), S. 6624-6629 
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical chemistry accounts 105 (2000), S. 1-6 
    ISSN: 1432-2234
    Keywords: Key words: Dimethyl ether dimer – Intermolecular Ab initio – Thermodynamic properties
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract.  The potential surface of dimethyl ether dimer was subjected to an ab initio study at the second-order Møller–Plesset/6-31+G** level. The initial configurations used in the optimizations were chosen on the basis of a chemical criterion or compiled from the literature. Five different minima were identified and were confirmed by frequency calculations. Accurate characterization of the potential surface of the dimer entails considering electron correlation as several minima that are not exposed by Hartree–Fock/6-31+G** computations. Also, various thermodynamic properties of the minima were determined from their harmonic frequencies.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Structural chemistry 3 (1992), S. 225-229 
    ISSN: 1572-9001
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Conformational analysis of 1-amino-3-butene and 3-butene-1-thiol was carried out using the 4-21G basis set. The conformers obtained were subjected to 6-31G* single-point analysis for the calculation of energies, charge distributions, and dipole moments. The geometries and stabilities obtained are in good agreement with available experimental data. The results are interpreted in terms of intramolecular hydrogen bonding and anomeric interactions: Some of the most stable conformers of both molecules have intramolecular hydrogen bonds between the hydrogens of the amino or thiol groups and theπ electrons of the double bond. The 4-21G geometries were refined to obtain rotational constants closer to the experimental values.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1572-9001
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract We carried out an ab initio study on salicylaldehyde ando-hydroxyacetophenone with full optimization at the 3–21G level. The most stable conformation of the two compounds was that including an intramolecular hydrogen bond, the energy and structural effects of which were estimated. We also studied the stability of the respective tautomers arising from a proton transfer. Such tautomers are quinoid in nature, which implies the loss of the aromatic character of the benzene ring and hence leads to major destabilization. Thus, the tautomerization potential curve of salicylaldehyde featured an inverse barrier of only 2.1 kJ/mol; this barrier was not even present ino-hydroxyacetophenone owing to the effect of the methyl group, which thus overcome the low stability of the quinoid tautomer. In this tautomerization study some single-point calculations at the 6–31G** level were also carried out. In both compounds these calculations give rise to an increase of barriers.
    Type of Medium: Electronic Resource
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