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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Archives of microbiology 145 (1986), S. 303-305 
    ISSN: 1432-072X
    Keywords: Euglena gracilis ; Paraflagellar body ; Photoreception
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have described a procedure for isolating photoreceptors (paraflagellar bodies) from the unicellular phototactic alga Euglena gracilis. This procedure elicited the evagination of the reservoir membrane, and the detachment of the flagellar apparatus due to the very high concentration of CaCl2 in the isolation solution that caused a frenetical acceleration of the flagellar beating.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 37 (1990), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Euplotidium itoi share with some other species of the same genus a peculiar feature: the presence of a band of particles running along the right and left borders of the cell body and forming a sort of “scarf” at the dorsal anterior end. The ultrastructural analysis, here performed, revealed that these particles (reported in the literature as extrusomes) are always external to the cell and are inserted in matching depressions on the euplotidium cortex. They are present in two different forms: type I, whose ultrastructure recalls that of bacteria, are able to reproduce by binary fission; type II are not able to divide and contain peculiar structures (a granular dome-shaped zone, a complex extrusive apparatus and a network of regularly arranged fibrils) which render them more complicated with respect to the majority of prokaryotic organisms. These observations, together with the finding that these particles contain DNA, indicate that we are dealing with epibionts, that will be referred to as “epixenosomes” (ecto-organisms), rather than extrusomes. Some ideas about the nature of “epixenosomes” and their relationship with the host cell are proposed and discussed.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 50 (2003), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Exocytosis is, in all likelihood, an important communication method among microbes. Ciliates are highly differentiated and specialized micro-organisms for which versatile and/or sophisticated exocytotic organelles may represent important adaptive tools. Thus, in ciliates, we find a broad range of different extrusomes, i.e ejectable membrane-bound organelles. Structurally simple extrusomes, like mucocysts and cortical granules, are widespread in different taxa within the phylum. They play the roles in each case required for the ecological needs of the organisms. Then, we find a number of more elaborate extrusomes, whose distribution within the phylum is more limited, and in some way related to phylogenetic affinities. Herein we provide a survey of literature and our data on selected extrusomes in ciliates. Their morphology, distribution, and possible function are discussed. The possible phylogenetic implications of their diversity are considered.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Science Inc
    The @journal of eukaryotic microbiology 52 (2005), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Verrucomicrobiales are a newly proposed, deep branched division of bacteria from which only a handful of cultured isolates are available. Culture-independent analysis of environmental samples shows that members of Verrucomicrobiales are widespread and can be divided into several subdivisions. Symbiotic species of Euplotidium (Ciliophora) and Nematodes, epixenosomes and Xiphinemobacter spp. respectively, are according to the 16S sequences also members of this group. Up to now, only minimal sequence data mainly focused on 16S rRNA gene sequences are available for this group of organisms. The phylogenetic relatives of Verrucomicrobiales are still unclear with Chlamydiales and Planctomycetes being the most probable candidates. The present study describes preliminary results on phylogenetic relationships of Verrucomicrobiales by using protein-coding genes like Hsp70 and RpoC/B. The species which are used for this study are Prosthecobacter vanneervenii, P. debontii, Opitutus sp.VeGlc2, O. terrae and epixenosomes. The genes were amplified with designed consensus-degenerated primers and results are available on the Hsp70. The sequences show several differences within the group. Verrucomicrobium and Prosthecobacter sequences cluster together, but in P. debontii, two sequences were found, and the second one appears quite divergent. Also the two Opitutus genes are quite atypical and cluster together in a deep position. Preliminary attempt was performed on Euplotidium-epixenosome complex. However, amplified and cloned sequences revealed to be closely related to ciliate sequences. Further attempt will be performed applying microtiter-plate-subtractive-hybridization to characterize epixenosome genes.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Science Inc
    The @journal of eukaryotic microbiology 52 (2005), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: This study represents the first extended report on the heterotrichid ciliate Chattonidium setense since the original description by Villeneuve in 1937. This rare marine ciliate is in fact the only representative of the family Chattonidiidae, which is the eighth, often neglected, family of order Heterotrichida. As in our previous works, here we redescribe the species combining morphological observations (live, stained, scanning, and transmission electron microscope) with behavioral and molecular data as we are convinced that both taxonomic determination and molecular characterization are necessary for the clarification of phylogenetic relationships between a species and related genera. Live observation, Feulgen procedure and SEM analysis showed, besides a number of other interesting features, the presence of a characteristic aboral ciliated cavity of undetermined function, whose presence makes ciliate's identification unambiguous. TEM observation evidenced the following main features: well-divided ecto-and endoplasm; deep insertions of the rows of somatic dikinetids in cortex invaginations; paraglycogen granules as polysaccharide reserve; large bundles of microtubules and fibers delimiting the body region surrounding the aboral cavity; two kinds of subcortical extrusomes. Since the revision of heterotrichs ciliates by Villeneuve-Brachon (1940) many genera and families have been transferred to other classes on the basis of both new molecular data and reconsidered morphological characters. Our results support previous statements that Chattonidium has the general morphology typical of Heterotrichida and that the main similarities are with genus Condylostoma. 18S rRNA molecular data firmly confirm that Chattonidium belongs to class Hetrotrichea, order Hetrotrichida (Lynn, D. H. 2003. The Ciliate Resource Archive. ) as an independent lineage. Preliminary molecular data also suggest an association between genera Chattonidium and Condylostoma. Finally, some behavioral and ecological notes on the ciliate are added.
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Tubulins are typical eucaryotic genes, which have recently been found in the free-living bacteria Prosthecobacter (Verrucomicrobiales). Nevertheless, microtubule-like structures were never observed in Prostecobacter, whereas they were reported in epixenosomes which are symbiotic Verrucomicrobiales of the ciliate Euplotidium. In the present work, an extensive search for tubulin like genes was performed with several combinations of PCR-primers, designed according to different criteria. Although some combinations of these primers are able to amplify simultaneously eukaryotic α- and β-tubulin as well as Prosthecobacter tubulin genes, no bacterial-like tubulin genes were identified in other Verrucomicrobiales species. Because of host derived contaminations, even a subtractive PCR approach, using microtiter-plate-subtractive-hybridization, was used with the epixenosomes. The characterization of the genomic environment of the Prosthecobacter tubulin genes was performed by gene walking. The sequences obtained from P. debontii revealed a so-far undiscovered gene duplication. The bacterial tubulin operon looks conserved among Prosthecobacter species and includes an α-tubulin, a β-tubulin and a kinesin like protein. Upstream of two operons a repetetive sequence could be found which could be a hint for horizontal gene transfer. The analysis of the genomic environments of the tubulin genes provided open reading frames, which have homology to Verrucomicrobium spinosum genes (ongoing genome project data), whereas up to now the blast search did not reveal tubulin-like genes in this organism. Present results suggest, that the Prosthecobacter tubulin genes are possibly of recent origin, maybe acquired by horizontal gene transfer, or lost by other so far studied Verrucomicrobiales. The origin and nature of microtubular genetic determinants from epixenosomes remains open.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Science Inc
    The @journal of eukaryotic microbiology 52 (2005), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Bacteria belonging to the genus Polynucleobacter were previously described as endosymbionts inhabiting the cytoplasm of freshwater ciliates of the genus Euplotes having a 9 type I cirrus pattern. They were all found to be necessary for the division process of their hosts. Here, we report the finding of a Polynucleobacter bacterium as symbiont of E. harpa, a brackish species with ten frontoventral cirri. Identity of the symbionts was unambiguously determined by morphological description and by 16S rRNA gene sequence characterization. Furthermore, antibiotic treatments confirmed that these bacteria play the same functional role of the other Polynucleobacter symbionts; aposymbiotic E. harpa ceases to divide and eventually die. Phylogenetic analyses based on 18S rRNA gene show that Euplotes species harboring Polynucleobacter symbionts, included E. harpa, steadily cluster together. In order to clear whether this symbiosis was established as a single evolutionary event by a common ancestor of the ciliate hosts, or by multiple acquisition of different bacteria by the different Euplotes species, comparative phylogenetic analyses were performed within the so-called Polynucleobacter-cluster, comprising bacterial symbionts as well as strictly related free-living bacteria. Due to a high degree of conservation of 16S rRNA gene sequences within this group, phylogenetic trees based on this gene did not resolve the matter. Surprisingly, even the characterization and the analysis of the 16-23S ITS sequences, usually exhibiting faster evolutionary rates, revealed a high similarity (〉98%), thus hindering a stable and clear phylogenetic reconstruction. Data obtained cannot at present definitively confirm or reject any hypothesis on the origin of this symbiosis, revealing, at the same time, that we are dealing with a relatively young symbiotic system. As shown by the close phylogenetic relationship between free-living and symbiotic Polynucleobacter, this is an ideal model for studying development and adaptation to symbiotic lifestyle.
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . We combined behavioral, morphological (live, stained, scanning and transmission electron-microscope), and molecular data to redescribe two common, intertidal oligotrich ciliates, Novistrombidium testaceum and Strombidium inclinatum. Both species were collected from a rocky shore near Leghorn, Ligurian Sea. A literature review revealed four morphotypes of Novistrombidium testaceum that differ in subtle ways, including oral morphology. These differences may be diagnostic, but we do not consider them sufficient to distinguish different taxa. Although other studies have synonymised Strombidium inclinatum and S. sulcatum, based on oral structures, size, and nuclear structure, there are morphological distinctions between them. In particular, the present study supports a lack of anterior protuberance in both live and preserved S. inclinatum, while S. sulcatum possesses a protuberance. The 18S rDNA molecular data, in accordance with morphological and ultrastructural observations, indicate that the Strombidiida (Oligotrichia) constitute a well-supported clade. The separation of the genera within this clade, even between Novistrombidium and Strombidium, remains unresolved, and the analysis of more species is required. Finally, we recommend that when possible, ecologists, morphological taxon-omists, and molecular biologists combine their expertise to provide comprehensive taxonomic descriptions.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 46 (1999), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Euplotidium itoi harbors on its dorsal surface peculiar episymbionts (referred to as epixenosomes) equipped with a complex extrusive apparatus. In the laboratory. E. itoi stocks without epixenosomes behave and reproduce like symbiotized stocks. the hypothesis that epixenosomes play a defensive role against predators was tested by comparing the behavior of Litonotus lamella when preying upon Euplotes crassus, E. itoi without epixenosomes. and E. itoi with epixenosomes. Litonotus discharges its toxicysts upon direct-cell-to cell contact, and paralyzes the three types of prey with the same efficiency. Nevertheless, Litonotus can ingest Euplotes, Euplotidium without epixenosomes, and to a certain extent, Euplotidium with epixenosomes whose ejecting capability has been inhibited. while it never eats Euplotidium with unaltered epixenosomes. In each prey-type, about 60% of the individuals attacked by Litonotus toxicyst discharge are able to recover their normal behavior once transferred into pure sea water. This percentage for E. itoi with epixenosomes that are never eaten by the predator corresponds to the probability of survival. This probability is lower for the other two prey-types in which the prey engulfed by the predator do not have the chance to recover. These data support the hypothesis and suggest the involvement of the epixenosome's ejecting apparatus in a defensive function.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Science Inc
    The @journal of eukaryotic microbiology 52 (2005), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract. We have found a Polynucleobacter bacterium in the cytoplasm of Euplotes harpa, a species living in a brackish-water habitat, with a cirral pattern not corresponding to that of the freshwater Euplotes species known to harbor this type of bacteria. The symbiont has been found in three strains of the species, obtained by clonal cultures from ciliates collected in different geographic regions. The 16S rRNA gene sequence of this bacterium identifies it as a member of the β-proteobacterial genus Polynucleobacter. This sequence shares a high similarity value (98.4–98.5%) with P. necessarius, the type species of the genus, and is associated with 16S rRNA gene sequences of environmental clones and bacterial strains included in the Polynucleobacter cluster (〉95%). An oligonucleotide probe was designed to corroborate the assignment of the retrieved sequence to the symbiont and to detect similar bacteria rapidly. Antibiotic experiments showed that the elimination of the bacteria stops the reproductive cycle in E. harpa, as has been shown for the freshwater Euplotes species.
    Type of Medium: Electronic Resource
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