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Notes: Abstract Results of a long-term study of the taxonomy, distribution and abundance of the hermatypic corals of the Ryukyu Is. and mainland Japan indicate that the present high diversity is threatened by a quantitative and qualitative decrease in available habitat caused by Acanthaster planci predation and human-induced environmental deterioration. Ninety-eight sites were studied, allowing detailed comparison between the three main groups of the Ryukyu Is. (Yaeyama, Okinawa and Amami Groups) and seven principal coral regions of mainland Japan (Tanegashima, Amakusa Is., the Tosashimizu and Kushimoto regions, and the Shirahama, Izu and Tateyama Peninsulas). Within this area, 400 species have been recorded and 9 additional species are recorded from the literature, from additional localities, or with doubt, from the Ryukyu Is. In non-mutually exclusive distribution and abundance categories for the Ryukyu Is. and mainland Japan: 129 species are common in at least some Japanese localities; 24 are widely dispersed within the Indo-Pacific, but occur in small, perhaps disjunct populations in Japan; 149 are uncommon throughout their Indo-west Pacific distribution ranges including Japan; 38 are restricted to the Yaeyama Group where all but three are uncommon or rare; 69 purely reefal (Ryukyu Is.) species are rare; 17 are rare in the Ryukyu Is. but are relatively common in mainaland locations; and 8 species appear to be endemic to mainland Japan and adjacent Asian countries. Some 37% of all Japanese hermatypic corals are uncommon throughout their range in Japan and are at some risk of regional extinction, 29% of others are rare and at substantial risk as they occur only in very limited areas of high diversity or in species-specific refuges. These sites are dientified. Of the 8 endemic species, 5 are primarily restricted to species-specific refuges. These data indicate an unstable situation. At least one third of all Japanese hermatypic species will eventually be at risk if the present causes of diversity decrease are not remedied.

Notes: Abstract  Coral reef geomorphology and community composition were investigated in the tropical northeastern Pacific during April 1994. Three areas were surveyed in the Revillagigedo Islands (Mexico), and an intensive study was conducted on Clipperton Atoll (1,300 km SW of Acapulco), including macro-scale surface circulation, sea surface temperature (SST) climatology, geomorphology, coral community structure, zonation, and biogeography. Satellite-tracked drifter buoys from 1979–1993 demonstrated complex patterns of surface circulation with dominantly easterly flow (North Equatorial Counter Current, NECC), but also westerly currents (South Equatorial Current, SEC) that could transport propagules to Clipperton from both central and eastern Pacific regions. The northernmost latitude reached by the NECC is not influenced by El o-Southern Oscillation (ENSO) events, but easterly flow velocity evidently is accelerated at such times. Maximum NECC flow rates indicate that the eastern Pacific barrier can be bridged in 60 to 120 days. SST anomalies at Clipperton occur during ENSO events and were greater at Clipperton in 1987 than during 1982–1983. Shallow (15—18 m) and deep (50–58 m) terraces are present around most of Clipperton, probably representing Modern and late Pleistocene sea level stands. Although Clipperton is a well developed atoll with high coral cover, the reef-building fauna is depauperate, consisting of only 7 species of scleractinian corals belonging to the genera Pocillopora, Porites, Pavona and Leptoseris, and 1 species of hydrocoral in the genus Millepora. The identities of the one Pocillopora species and one of the two Porites species are still unknown. Two of the remaining scleractinians (Pavona minuta, Leptoseris scabra) and the hydrocoral (Millepora exaesa), all formerly known from central and western Pacific localities, represent new eastern Pacific records. Scleractinian corals predominate (10–100% cover) over insular shelf depths of 8 to 60 m, and crustose coralline algae are dominant (5–40% cover) from 0.5 to 7 m. Spur and groove features, constructed of alternating frameworks of Pocillopora and Porites, and veneered with crustose coralline algae, are generally well developed around most atoll exposures. Although crustose coralline algae predominate in the breaker zone (with up to 100% cover), a prominent algal ridge is absent with only a slight buildup (ca. 10 cm) to seaward. Frequent grazing by the pufferfish Arothron meleagris results in the removal of large amounts of live tissue and skeleton from Porites lobata. Acanthaster planci is present, but rare. The grazing of large diadematid sea urchins, (2 species each of Diadema and Echinothrix) on dead corals cause extensive erosion in some areas. Large numbers of corals on the 15–18 m terrace had recently suffered partial (P. lobata, 60–70% maximum of all colonies sampled) or total (Pocillopora sp., 80% maximum) mortality. The lengths of regenerating knobs and the rates of linear skeletal growth in P. lobata, determined by sclerochronologic analysis, indicated a period of stress during 1987. Massive skeletal growth is significantly higher at intermediate (16–17 m) than shallow (6–8 m) depths with mean extension rates of in P. minuta at intermediate depths. Skeletal growth in P. lobata was depressed during the 1987 El o event at Clipperton. The branching coral Pocillopora sp. demonstrated high and similar skeletal growth rates at both shallow and depths. The presence of widely distributed Indo-Pacific zooxanthellate corals at Clipperton and the Revillagigedo Islands indicates that these NE Pacific Islands probably serve as a stepping stone for dispersal into the far eastern Pacific region.

Notes: Abstract Two of the most abundant corals of the Great Barrier Reef Acropora cuneata and Acropora palifera, can be distinguished reliably by conventional taxonomic methods only if large specimens of both species are collected from the same uniform biotope. In this study gross and microscopic examination of the corallite structures of large coralla, collected from a reef crest biotope, were used to confirm the assignment of these specific names to two electrophoretically distinct groups of corals. Identifications based on genetic and morphological data gathered from small fragments of coralla collected from five different sites were in agreement for two sites within which skeletal data were adequate for taxonomic purposes (i.e. one reef crest and one outer lagoon site). However, specimens collected from the other three sites could be identified reliably only by using the electrophoretic data. These results confirm that small fragments from diverse habitats may not be adequate for morphologically based identification. The application of electrophoretic identifications to the results of an earlier electrophoretic survey of 76 sites on 11 reefs revealed that, although A. palifera and A. cuneata frequently co-occur, they have significantly different habitat distributions. Acropora cuneata is more commonly associated with high energy environments such as the reef crest, whereas A. palifera occurs most commonly in the sheltered reef lagoons and on the deeper reef slopes.

Notes: Abstract Coral reef geomorphology and community composition were investigated in the tropical northeastern Pacific during April 1994. Three areas were surveyed in the Revillagigedo Islands (Mexico), and an intensive study was conducted on Clipperton Atoll (1,300 km SW of Acapulco), including macro-scale surface circulation, sea surface temperature (SST) climatology, geomorphology, coral community structure, zonation, and biogeography. Satellite-tracked drifter buoys from 1979–1993 demonstrated complex patterns of surface circulation with dominantly easterly flow (North Equatorial Counter Current, NECC), but also westerly currents (South Equatorial Current, SEC) that could transport propagules to Clipperton from both central and eastern Pacific regions. The northernmost latitude reached by the NECC is not influenced by El Niño-Southern Oscillation (ENSO) events, but easterly flow velocity evidently is accelerated at such times. Maximum NECC flow rates indicate that the eastern Pacific barrier can be bridged in 60 to 120 days. SST anomalies at Clipperton occur during ENSO events and were greater at Clipperton in 1987 than during 1982–1983. Shallow (15–18 m)and deep (50–58 m) terraces are present around most of Clipperton, probably representing Modern and late Pleistocene sea level stands. Although Clipperton is a well developed atoll with high coral cover, the reef-building fauna is depauperate, consisting of only 7 species of scleractinian corals belonging to the generaPocillopora, Porites, Pavona andLeptoseris, and 1 species of hydrocoral in the genusMillepora. The identities of the one Pocilpopora species and one of the twoPorites species are still unknown. Two of the remaining scleractinians (Pavona minuta, Leptoseris scabra) and the hydrocoral (Millepora exaesa), all formerly known from central and western Pacific localities, represent new eastern Pacific records. Scleractinian corals predominate (10–100% cover) over insular shelf depths of 8 to 60m, and crustose coralline algae are dominant (5–40% cover) from 0.5 to 7m. Spur and groove features, constructed of alternating frameworks ofPocillopora andPorites, and veneered with crustose coralline algae, are generally well developed around most atoll exposures. Although crustose coralline algae predominate in the breaker zone (with up to 100% cover), a prominent algal ridge is absent with only a slight buildup (ca. 10 cm) to seaward. Frequent grazing by the pufferfishArothron meleagris results in the removal of large amounts of live tissue and skeleton fromPorites lobata. Acanthaster planci is present, but rare. The grazing of large diadematid sea urchins, (2 species each ofDiadema andEchinothrix) on dead corals cause extensive erosion in some areas. Large numbers of corals on the 15–18 m terrace had recently suffered partial (P. lobata, 60–70% maximum of all colonies sampled) or total (Pocillopora sp., 80% maximum) mortality. The lengths of regenerating knobs and the rates of linear skeletal growth inP. lobata, determined by sclerochronologic analysis, indicated a period of stress during 1987. Massive skeletal growth is significantly higher at intermediate (16–17 m) than shallow (6–8 m) depths with mean extension rates of 1.5 mm yr−1 inP. lobata and 1.4 mm yr−1 inP. minuta at intermediate depths. Skeletal growth inP. lobata was depressed during the 1987 El Nifio event at Clipperton. The branching coralPocillopora sp. demonstrated high and similar skeletal growth rates at both shallow (25.4 mm yr−1) and intermediate (26.5 mm yr−1) depths. The presence of widely distributed Indo-Pacific zooxanthellate corals at Clipperton and the Revillagigedo Islands indicates that these NE Pacific Islands probably serve as a stepping stone for dispersal into the far eastern Pacific region.

Notes: Abstract.  The widely accepted family tree of Scleractinia published by Wells, based on a combination of morphological coral taxonomy and the fossil record, has recently been revised by Veron. It is now possible to test the validity of some of the conclusions reached by these and other authors by the use of molecular techniques. This paper reviews the results to date. Studies of ribosomal DNA have shown that the Scleractinia are monophyletic, i.e. derived from the same ancestral taxon. Extensions of this same data set now indicate that the Poritidae and Dendrophylliidae, with their fossil antecedents, may each warrant separate suborder status. They further suggest (a) that the Suborder Faviina (faviids, mussids and their allies) should probably be retained as a monophyletic group and (b) that Wells’ original account of the isolated position of the Pocilloporidae and Astrocoeniidae is correct. These conclusions all accord with Veron’s family tree. However, the Fungiina, even after removal of the Poritidae, are unlikely to be a monophyletic group at suborder level. The molecular data further show that externally observable morphological characters used in the taxonomy of extant corals distinguish families more reliably than do internal micro-skeletal characters frequently used in coral palaeontology.

Notes: Abstract Electrophoretic surveys of 13 enzyme-coding loci distinguished unambiguously five morphologically defined species of Porites and two species of Goniopora. Each species was identifiable solely by unique, qualitative banding patterns at 1–6 loci. Genetic distances give preliminary estimates that these Porites species diverged from common ancestors 8–22 Ma during the Miocene, and that the two Goniopora species diverged about 3.5 Ma in the Pliocene, assuming Porites evolved from Goniopora 55 million years ago (Ma).

Notes: Abstract The widely accepted family tree of Scleractinia published by Wells, based on a combination of morphological coral taxonomy and the fossil record, has recently been revised by Veron. It is now possible to test the validity of some of the conclusions reached by these and other authors by the use of molecular techniques. This paper reviews the results to date. Studies of ribosomal DNA have shown that the Scleractinia are monophyletic, i.e. derived from the same ancestral taxon. Extensions of this same data set now indicate that the Poritidae and Dendrophylliidae, with their fossil antecedents, may each warrant separate suborder status. They further suggest (a) that the Suborder Faviina (faviids, mussids and their allies) should probably be retained as a monophyletic group and (b) that Wells' original account of the isolated position of the Pocilloporidae and Astrocoeniidae is correct. These conclusions all accord with Veron's family tree. However, the Fungiina, even after removal of the Poritidae, are unlikely to be a monophyletic group at suborder level. The molecular data further show that externally observable morphological characters used in the taxonomy of extant corals distinguish families more reliably than do internal micro-skeletal characters frequently used in coral palaeontology.

Notes: Abstract Nucleotide sequences have been determined for 31 homologous 118 base-pair highly repeated DNA sequences from seven species ofAcropora. A matrix was constructed from the sequence data and subjected to phylogenetic analysis using heuristic search routines in the PAUP (phylogenetic analysis using parsimony) program, Version 3.0L. These analyses confirm a close relationship between two species of one subgeneric group (A. pulchra andA. millepora), but identify a division in a group of six species which is contrary to taxonomic groupings based on morphological criteria.