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  • 1
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-4986
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1573-4986
    Keywords: isolation of N-glycans ; reducing oligosaccharides ; glycosyltransferase substrates ; proton NMR
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Sixteen asparagine-linked oligosaccharides ranging in size from (Man)2(GlcNAc)2 (Fuc)1 to (GlcNAc)6(Man)3(GlcNAc)2 were obtained from human α1-acid glycoprotein and fibrinogen, hen ovomucoid and ovalbumin, and bovine fetuin, fibrin and thyroglobulin by hydrazinolysis, mild acid hydrolysis and glycosidase treatment. The oligosaccharides hadN-acetylglucosamine at the reducing termini and mannose andN-acetylglucosamine residues at the non-reducing termini and were prepared for use asN-acetylglucosaminyltransferase substrates. Purification of the oligosaccharides involved gel filtration and high performance liquid chromatography on reverse phase and amine-bonded silica columns. Structures were determined by 360 MHz and 500 MHz proton nuclear magnetic resonance spectroscopy, fast atom bombardment-mass spectrometry and methylation analysis. Several of these oligosaccharides have not previously been well characterized.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1573-4986
    Keywords: GlcNAc-transferase I ; substrate specificity ; glycoprotein biosynthesis ; N-linked glycans
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract UDP-GlcNAc: Manα3R β2-N-acetylglucosaminyltransferase I (GlcNAc-T I; EC 2.4.1.101) is the key enzyme in the synthesis of complex and hybrid N-glycans. Rat liver GlcNAc-T I has been purified more than 25,000-fold (M r 42,000). TheV max for the pure enzyme with [Manα6(Manα3)Manα6](Manα3)Manβ4GlcNAcβ4GlcNAcβ-Asn as substrate was 4.6 µmol min−1 mg−1. Structural analysis of the enzyme product by proton nuclear magnetic resonance spectroscopy proved that the enzyme adds anN-acetylglucosamine (GlcNAc) residue in β1–2 linkage to the Manα3Manβ-terminus of the substrate. Several derivatives of Manα6(Manα3)Manβ-R, a substrate for the enzyme, were synthesized and tested as substrates and inhibitors. An unsubstituted equatorial 4-hydroxyl and an axial 2-hydroxyl on the β-linked mannose of Manα6(Manα3)Manβ-R are essential for GlcNAc-T I activity. Elimination of the 4-hydroxyl of the α3-linked mannose (Man) of the substrate increases theK M 20-fold. Modifications on the α6-linked mannose or on the core structure affect mainly theK M and to a lesser degree theV max, e.g., substitutions of the Manα6 residue at the 2-position by GlcNAc or at the 3- and 6-positions by mannose lower theK M, whereas various other substitutions at the 3-position increase theK M slightly. Manα6(Manα3)4-O-methyl-Manβ4GlcNAc was found to be a weak inhibitor of GlcNAc-T I.
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 1573-4986
    Keywords: sialyl-Tn ; core 1 β3-Gal-transferase ; colon cancer
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Sialyl-Tn antigen (SAα2-6 GalNAcα-Ser/Thr) is expressed as a cancer-associated antigen on the surface of cancer cells and its expression correlates with a poor prognosis in patients with colorectal and other adenocarcinomas. To understand the enzymatic basis of sialyl-Tn (STn) antigen expression, we used two clonal cell lines, LSB and LSC, derived from LS174T human colonic cancer cells. LSC cells express only the truncated carbohydrate antigen Tn (GalNAcα-Ser/Thr) and sialyl-Tn on their mucin molecules, whereas LSB cells express elongated oligosaccharide chains. Both cell lines demonstrated similar activities of glycosyltransferases involved in the biosynthesis of elongated and terminal structures of complex O-glycans. However, LSC cells were unable to synthesize core 1 (Galβ1-3GalNAc-) because the ubiquitous enzyme activity of UDP-Gal:GalNAc-R β3-Gal-transferase (core 1 β3-Gal-transferase) was lacking. Core 1 β3-Gal-transferase could not be reactivated in LSC cells by treatment with sodium butyrate or by in vivo growth of LSC cells in nude mice. In contrast, LSB cells were able to synthesize and process core 1 and core 2 (GlcNAcβ1-6 (Galβ1-3) GalNAc-). LSC cells represent the first example of a non-hematopoietic cell line which lacks core 1 β3-Gal-transferase activity. The lack of core 1 β3-Gal-transferase in LSC cells explains why they are incapable of forming the common mucin O-glycan core structures and are committed to synthesizing the short Tn and STn oligosaccharides. These findings suggest that the activity of core 1 β3-Gal-transferase is an important determinant of the STn phenotype of colon cancer cells.
    Type of Medium: Electronic Resource
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  • 7
    ISSN: 1573-4986
    Keywords: glycosyltransferase ; O-glycan ; β6-N-acetylglucosaminyltransferase ; α3-sialyltransferase ; specificity ; leukemia
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract To elucidate control mechanisms ofO-glycan biosynthesis in leukemia and to develop biosynthetic inhibitors we have characterized core 2 UDP-GlcNAc:Galβ1-3GalNAc-R(GlcNAc to GalNAc) β6-N-acetylglucosaminyl-transferase (EC 2.4.1.102; core 2 β6-GlcNAc-T) and CMP-sialic acid: Galβ1-3GalNAc-R α3-sialyltransferase (EC 2.4.99.4; α3-SA-T), two enzymes that are significantly increased in patients with chronic myelogenous leukemia (CML) and acute myeloid leukemia (AML). We observed distinct tissue-specific kinetic differences for the core 2 β6-GlcNAc-T activity; core 2 β6-GlcNAc-T from mucin secreting tissue (named core 2 β6-GlcNAc-T M) is accompanied by activities that synthesize core 4 [GlcNAcβ1-6(GlcNAcβ1-3)GalNAc-R] and blood group I [GlcNAcβ1-6(GlcNAcβ1-3)Galβ-R] branches; core 2 β6-GlcNAc-T in leukemic cells (named core 2 β-GlcNAc-T L) is not accompanied by these two activities and has a more restricted specificity. Core 2 β6-GlcNAc-T M and L both have an absolute requirement for the 4- and 6-hydroxyls ofN-acetylgalactosamine and the 6-hydroxyl of galactose of the Galβ1-3GalNAcα-benzyl substrate but the recognition of other substituents of the sugar rings varies, depending on the tissue. α3-sialytransferase from human placenta and from AML cells also showed distinct specificity differences, although the enzymes from both tissues have an absolute requirement for the 3-hydroxyl of the galactose residue of Galβ1-3GalNAcα-Bn. Galβ1-3(6-deoxy)GalNAcα-Bn and 3-deoxy-Galβ1-3GalNAcα-Bn competitively inhibited core 2 β6-GlcNAc-T and α3-sialyltransferase activities, respectively.
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1573-4986
    Keywords: Synthetic oligosaccharides ; inhibitors ; N-glycans ; N-acetylglucosaminyltransferase ; biosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract UDP-GlcNAc: Manα1-6R β(1-2)-N-acetylglucosaminyltransferase II (GlcNAc-T II; EC 2.4.1.143) is a key enzyme in the synthesis of complexN-glycans. We have tested a series of synthetic analogues of the substrate Man‴α1-6(GlcNAc″β1-2Man′α1-3)Manβ-O-octyl as substrates and inhibitors for rat liver GlcNAc-T II. The enzyme attachesN-acetylglucosamine in β1-2 linkage to the 2‴-OH of the Man‴α1-6 residue. The 2‴-deoxy analogue is a competitive inhibitor (K i=0.13mm). The 2‴-O-methyl compound does not bind to the enzyme presumably due to steric hindrance. The 3‴-, 4‴- and 6‴-OH groups are not essential for binding or catalysis since the 3‴-, 4‴- and 6‴-deoxy and -O-methyl derivatives are all good substrates. Increasing the size of the substituent at the 3‴-position to pentyl and substituted pentyl groups causes competitive inhibition (K i=1.0–2.5mm). We have taken advantage of this effect to synthesize two potentially irreversible GlcNAc-T II inhibitors containing a photolabile 3‴-O-(4,4-azo)pentyl group and a 3‴-O-(5-iodoacetamido)pentyl group respectively. The data indicate that none of the hydroxyls of the Man‴α1-6 residue are essential for binding although the 2‴- and 3‴-OH face the catalytic site of the enzyme. The 4-OH group of the Manβ-O-octyl residue is not essential for binding or catalysis since the 4-deoxy derivative is a good substrate; the 4-O-methyl derivative does not bind. This contrasts with GlcNAc-T I which cannot bind to the 4-deoxy-Manβ- substrate analogue. The data are compatible with our previous observations that a ‘bisecting’N-acetylglucosamine at the 4-OH position prevents both GlcNAc-T I and GlcNAc-T II catalysis. However, in the case of GlcNAc-T II, the bisectingN-acetylglucosamine prevents binding due to steric hindrance rather than to removal of an essential OH group. The 3′-OH of the Man′α1-3 is an essential group for GlcNAc-T II since the 3′-deoxy derivative does not bind to the enzyme. The trisaccharide GlcNAcβ1-2Manα1-3Manβ-O-octyl is a good inhibitor (K i=0.9mm). The above data together with previous studies indicate that binding of the GlcNAcβ1-2Manβ1-3Manβ- arm of the branched substrate to the enzyme is essential for catalysis.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 1573-4986
    Keywords: GlcNAc-transferase V ; substrate specificity ; inhibition ; leukaemia ; N-linked glycans
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract UDP-GlcNAc:GlcNAc β1-2Manα1-6R (GlcNAc to Man) β1,6-N-acetylglucosaminyltransferase V (GlcNAc-T V) adds a GlcNAcβ1-6 branch to bi- and triantennaryN-glycans. An increase in this activity has been associated with cellular transformation, metastasis and differentiation. We have used synthetic substrate analogues to study the substrate specificity and inhibition of the partially purified enzyme from hamster kidney and of extracts from hen oviduct membranes and acute myeloid leukaemia leukocytes. All compounds with the minimum structure GlcNAcβ1-2Manα1-6Glc/Manβ-R were good substrates for GlcNAc-T V. The presence of structural elements other than the minimum trisaccharide structure affected GlcNAc-T V activity without being an absolute requirement for activity. Substrates with a biantennary structure were preferred over linear fragments of biantennary structures. Kinetic analysis showed that the 3-hydroxyl of the Manα1-3 residue and the 4-hydroxyl of the Manβ- residue of the Manα1-6(Manα1-3)Manβ-RN-glycan core are not essential for catalysis but influence substrate binding. GlcNAcβ1-2(4,6-di-O-methyl-)Manα1-6Glcβ-pnp was found to be an inhibitor of GlcNAc-T V from hamster kidney, hen oviduct microsomes and acute and chronic myeloid leukaemia leukocytes.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1573-4986
    Keywords: Synthetic oligosaccharides ; inhibitors ; N-glycans ; N-acetylglucosaminyltransferase ; biosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract UDP-GlcNAc:Manα1-3R β1-2-N-acetylglucosaminyltransferase I (GlcNAc-T I; EC 2.4.1.101) catalyses the conversion of [Manα1-6(Manα1-3)Manα1-6][Manα1-3]Manβ-O-R to [Manα1-6(Manα1-3)Manα1-6] [GlcNAcβ1-2Manα1-3]Manβ-O-R (R=1-4GlcNAcβ1-4GlcNAc-Asn-X) and thereby controls the conversion of oligomannose to complex and hybrid asparagine-linked glycans (N-glycans). GlcNAc-T I also catalyses the conversion of Manα1-6(Manα1-3)Manβ-O-octyl to Manα1-6(GlcNAcβ1-2Manα1-3)Manβ-O-octyl. We have therefore tested a series of synthetic analogues of Man″α1-6(Man′α1-3)Manβ-O-octyl as substrates and inhibitors for rat liver GlcNAc-T I. The 2″-deoxy and the 3″-, 4″- and 6″-O-methyl derivatives are all good substrates confirming previous observations that the hydroxyl groups of the Man″α1-6 residue do not play major roles in the binding of substrate to enzyme. In contrast, all four hydroxyl groups on the Man′α1-3 residue are essential since the corresponding deoxy derivatives either do not bind (2′- and 3′-deoxy) or bind very poorly (4′- and 6′-deoxy) to the enzyme. The 2′- and 3′-O-methyl derivatives also do not bind to the enzyme. However, the 4′-O-methyl derivative is a substrate (K m =2.6mm) and the 6′-O-methyl compound is a competitive inhibitor (K i=0.76mm). We have therefore synthesized various 4′- and 6′-O-alkyl derivatives, some with reactive groups attached to anO-pentyl spacer, and tested these compounds as reversible and irreversible inhibitors of GlcNAc-T I. The 6′-O-(5-iodoacetamido-pentyl) compound is a specific time dependent inhibitor of the enzyme. Four other 6′-O-alkyl compounds showed competitive inhibition while the remaining compounds showed little or no binding indicating that the electronic properties of the attachedO-pentyl groups influence binding.
    Type of Medium: Electronic Resource
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