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  • 1
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Conformational energy calculations using the MM2 (molecular mechanics II) program are reported for diastereoisomeric α- and β-azabicyclanes (3-methyl-9-methoxy-9-phenyl-3-azabicyclo [3.3.1] nonanes) which are prototypical phenyl-axial and phenyl-equatorial opiates. After energy minimization, both compounds are found to prefer a chair-chair conformation of the piperidine and cyclohexane rings with two mirror image orientations of the phenyl and methoxyl groups. The calculations also indicate that the equilibrium conformations of the phenyl and methoxyl groups are very similar in the two diastereoisomers. A morphine-like conformation of the phenyl group was found to be very unfavorable because of a high barrier to rotation of the phenyl group. This does not have an apparent effect on opiate agonist properties, but does result in a significant weakening of the antagonist activity of the N-allyl derivative of α-azabicyclane. This is discussed in terms of a model for phenyl-axial and phenyl-equatorial opiate substrates which accounts for both similarities and differences in their structure-activity relationships. A detailed comparison is also made between the computed structures and those observed by x-ray crystallography with excellent agreement between the two.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 7 (1986), S. 443-456 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A frequently encountered problem in chemical applications is that of a weighted enumeration (or summation over) a class of extended subgraphs of a given system graph, which might represent a chemical structure. Some aspects of a powerful transfer-matrix method are described for treating such graphtheoretic weighted enumeration problems. This method is seen to be particularly amenable for system graphs which are long in one direction and narrow in transverse directions. When the system graph is uniform (i.e., translationally symmetric) along one extended direction, asymptotic results can be readily extracted.A second point of emphasis here is that the weighted enumeration problems of the type studied here naturally arise in computing matrix elements over cluster expanded wave functions, though most applications so far framed in the literature differ from this. Size consistency and size-extensivity aspects of this application are noted in terms of the transfer-matrix approach.Polypyrene fusene strips of varying lengths are considered as applications of the transfer-matrix methods for two weighted enumeration problems. Different graph-theoretic problems are noted to arise for low-order cluster expanded wave functions, such as in fact occur in both the Herndon-Simpson and the Pauling-Wheland resonance theories. For higher-order wave function ansätze the graph-theoretic problems would simply have more complicated weights and transfer matrices, which for the present examples are very small (i.e., 2 by 2 and 3 by 3).
    Additional Material: 12 Ill.
    Type of Medium: Electronic Resource
    Library Location Call Number Volume/Issue/Year Availability
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