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  • 11
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 55 (1999), S. 1188-1192 
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: DNA-dependent RNA polymerase is the key enzyme responsible for the biosynthesis of RNA, a process known as transcription. This process, which decodes the genetic information from DNA, is one of the most significant events in a biological system. The crystallization of both native and a chimeric T7/T3 RNAP using high-salt conditions has been reported previously but these conditions proved unsuitable for DNA–RNAP complex formation since at high-salt concentrations the DNA binding affinity to RNAP is reduced. A search for low-salt crystallization conditions has yielded new low-salt crystals of native T7-RNAP, a chimeric T7-RNAP (T7/T3 RNAP) which contains the T3 promoter recognition sequence, and a T7-RNAP containing an N-terminal histidine tag. The crystals, which are better suited for DNA–RNAP complex formation, belong to space group P3121 with a = 136, c = 156 Å, contain a single molecule per asymmetric unit and diffract to 2.7 Å resolution. Packing analysis shows that the new low-salt crystals have packing contacts similar to those observed in the high-salt T7-RNAP crystals reported previously. The diffraction anisotropicity observed in crystals of T7 RNAP is explained in term of crystal packing.
    Type of Medium: Electronic Resource
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  • 12
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 55 (1999), S. 1201-1203 
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Ferrochelatase (protoheme ferrolyase, E.C. 4.99.1.1), the terminal enzyme in the heme biosynthetic pathway, catalyzes the insertion of ferrous iron into protoporphyrin IX to form protoheme. In eukaryotes, the protein is associated with the inner surface of the inner mitochondrial membrane, and in higher animals the enzyme contains a [2Fe–2S] cluster. This cluster is highly sensitive to NO and is coordinated by four Cys residues whose spacing in the primary sequence is unique. Ferrochelatase from Drosophila melanogaster has been expressed in Escherichia coli with an amino-terminal six-histidine tag and purified to homogeneity. The protein has been crystallized with the [2Fe–2S] cluster intact. The crystals belong to space group I422, with unit-cell dimensions a = b = 158.1, c = 171.2 Å and two molecules in the asymmetric unit, and diffract to 3.0 Å resolution.
    Type of Medium: Electronic Resource
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  • 13
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 56 (2000), S. 902-903 
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Eukaryotic mitochondria contain a distinct mini-chromosome. In yeast, transcription of the mitochondrial genome is mediated by a nuclear-encoded RNA polymerase consisting of a single polypeptide core enzyme and a specificity factor termed sc-mtTFB which bears some similarity to bacterial σ-factors. sc-mtTFB from Saccharomyces cerevisiae has been cloned, expressed, purified and crystallized. The crystals belong to the monoclinic space group C2, with unit-cell parameters a = 89.7, b = 44.6, c = 98.9 Å, β = 110°. Based on one molecule per asymmetric unit, the solvent content is estimated to be 48%. Small crystals of dimensions 0.01 × 0.05 × 0.13 mm diffract to at least 2.7 Å resolution on a rotating-anode X-ray source.
    Type of Medium: Electronic Resource
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  • 14
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 57 (2001), S. 1639-1642 
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: The implantation of animal organs is one approach to overcoming the shortage of human donor organs for medical transplantation. Although readily available, non-primate tissues are subject to hyperacute rejection wherein human anti-Galα(1–3)Gal antibodies react with haptens present on the transplanted cells' surfaces. The understanding of this interaction on a molecular level will further the development of a strategy for the prevention of hyperacute rejection in xenotransplantation. The Galα(1–3)Gal hapten (`xenograft antigen') has been cocrystallized with the Gal-specific B4 isolectin of Griffonia simplicifolia lectin-1. Crystals were analyzed by cryocrystallography and were found to diffract to moderately high resolution on a rotating-anode X-ray source. They belong to the P21212 space group, with unit-cell parameters a = 111.0, b = 51.3, c = 76.9 Å, and contain two molecules per asymmetric unit.
    Type of Medium: Electronic Resource
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  • 15
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature structural biology 3 (1996), S. 163-169 
    ISSN: 1072-8368
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The first crystal structure of the pituitary hormone oxytocin complexed with its carrier protein neurophysin has been determined and refined to 3.0 Å resolution. The hormone-binding site is located at the end of a 310-helix and involves residues from both domains of each monomer. Hormone ...
    Type of Medium: Electronic Resource
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  • 16
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature structural biology 8 (2001), S. 156-160 
    ISSN: 1072-8368
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Human ferrochelatase (E.C. 4.99.1.1) is a homodimeric (86 kDa) mitochondrial membrane-associated enzyme that catalyzes the insertion of ferrous iron into protoporphyrin to form heme. We have determined the 2.0 Å structure from the single wavelength iron anomalous scattering signal. The enzyme ...
    Type of Medium: Electronic Resource
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  • 17
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature 364 (1993), S. 593-599 
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The crystal structure of T7 RNA polymerase reveals a molecule organized around a cleft that can accommodate a double-stranded DNA template. A portion (∼ 45%) of the molecule displays extensive structural homology to the polymerase domain of Klenow fragment and more limited homology to the human ...
    Type of Medium: Electronic Resource
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  • 18
    Electronic Resource
    Electronic Resource
    Springer
    The European physical journal 26 (1993), S. 195-197 
    ISSN: 1434-6079
    Keywords: 36.40.+d ; 05.45.+b
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract The structure and long-time dynamics of (LiBr) n n=4,5,8 were studied by optimization and molecular dynamics. The ring structure, double ring stack for (LiBr)8, was found to be the energy minimum. They are dynamically flexible and, particularly for (LiBr)4 and (LiBr)5, hardly isomerise into other isomers determined by optimization. (LiBr)8 is probably a promising candidate to exhibit dynamic coexistence among a number of isomers.
    Type of Medium: Electronic Resource
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  • 19
    Electronic Resource
    Electronic Resource
    Springer
    The European physical journal 26 (1993), S. 178-180 
    ISSN: 1434-6079
    Keywords: 36.40.+d
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract The (KCl)32 cluster is used as a model system to study the possibilities for clusters to exhibit amorphous or glassy solid forms. The problem has two aspects: first, whether the potential surface of the cluster supports a myriad of locally stable, disordered structures, the ensemble of which would constitute the glassy state, and second, whether an ensemble of amorphous clusters can be prepared under laboratory conditions. Molecular dynamics studies give an emphaticyes to the first issue, and an equally emphaticno to the second, for cooling rates up to 1012 K/s, a thousand-fold faster than the fastest rates yet reported. However, if the long-range Coulomb interaction of the ions is replaced by a shielded Coulomb (Debye or Yukawa) potential, the secondary minima are sufficiently stabilized and the saddles, sufficiently high, that disordered equilibrium structures can be reached by cooling at fast, but still conceivably attainable rates. The implication is that while alkali halide clusters probably cannot form glasses, binary clusters with shorter-range forces, such as those of II–VI and III–V compounds, probably can form glasses. The highly disordered structures of (KCl)32 are perhaps the most disordered forms yet seen for solid matter.
    Type of Medium: Electronic Resource
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  • 20
    Electronic Resource
    Electronic Resource
    Springer
    The European physical journal 26 (1993), S. 189-191 
    ISSN: 1434-6079
    Keywords: 36.40.+d
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract Binary clusters of ionic substances exhibit several properties that make them quite different from homogeneous clusters representable by pairwise Lennard-Jones or Morse potentials. While the potential energy surfaces of clusters of a only a few or several pairs of ions can be explored in microscopic detail, clusters of the size of (KC1)32 must be examined statistically. The stable structures of (KC1)32 can be put into four useful categories: (1) the rocksalt-like ground state (2) slightly defective crystal-like structures (3) “non-wetting” structures that are partly rocksalt-like and partly amorphous and (4) the amorphous structures. A method is presented to estimate the density of configurational states as a function of energy and, from it, the partition function and thermodynamic properties of (KC1)32. Solid and liquid forms of this cluster can coexist in measurable quantities over a significant range of temperatures. However, the times required for the cluster to show ergodic exploration of solid-like and liquid-like regions of phase space is beyond the limits of conventional dynamic simulations.
    Type of Medium: Electronic Resource
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