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  • photosynthesis  (5)
  • Computational Chemistry and Molecular Modeling  (4)
  • 1
    Digitale Medien
    Digitale Medien
    Springer
    Journal of chemical ecology 25 (1999), S. 1611-1621 
    ISSN: 1573-1561
    Schlagwort(e): Hydroquinone ; allelopathy ; plant water balance ; photosynthesis ; chlorophyll fluorescence ; 13C isotopes ; leafy spurge ; Euphorbia esula ; small everlasting ; Antennaria microphylla Rydb
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie , Chemie und Pharmazie
    Notizen: Abstract Field observations indicate leafy spurge (Euphorbia esula) is inhibited by the presence of Antennaria microphylla. Hydroquinone (HQ), one of several compounds isolated from A. microphylla has been shown to inhibit leafy spurge seed germination, root elongation, and callus culture growth. The present study was designed to analyze the effects of HQ on water relations and photosynthesis of leafy spurge. Plants grown in 0.25 mM HQ had consistently higher leaf diffusive resistance and lower transpiration rates than control plants (P 〈 0.05). Chlorophyll fluorescence was significantly lower than controls (P 〈 0.05) towards the end of the treatment period. At the end of the treatment, tissue from 0.25 mM HQ plants had higher levels of 13C, indicating there had been a sustained interference with stomatal function. These data suggest that a disruption of the plant water balance is one mechanism of leafy spurge inhibition by A. microphylla.
    Materialart: Digitale Medien
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  • 2
    Digitale Medien
    Digitale Medien
    Springer
    Journal of chemical ecology 26 (2000), S. 2095-2109 
    ISSN: 1573-1561
    Schlagwort(e): Caffeic acid ; allelopathy ; plant water balance ; photosynthesis ; chlorophyll fluorescence ; 13C carbon isotopes ; leafy spurge ; Euphorbia esula ; small everlasting ; Antennaria microphylla
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie , Chemie und Pharmazie
    Notizen: Abstract Leafy spurge (Euphorbia esula), a native perennial weed introduced from Eurasia around the turn of the century, disrupts natural and agroecosystems across much of the Northern Great Plains. While leafy spurge displaces many native plant species, it has been demonstrated that small everlasting (Antennaria microphylla), a native perennial, is allelopathic to leafy spurge. Caffeic acid (CA), one of three compounds isolated from small everlasting, inhibits leafy spurge seed germination, root elongation, and callus culture growth. This study investigated the mechanism of this interference at the whole-plant level. Results indicate that inhibition of growth in leafy spurge after exposure to CA is primarily due to a disruption of plant–water relations. Leafy spurge cuttings were propagated in 0.5 strength Hoagland's nutrient solution for 30 days. For treatments, six plants were transferred into nutrient medium amended with either 0.1 or 0.25 mM CA for a period of 30 days. To determine the effect of pH, two additional groups of six plants were grown in nutrient medium adjusted with HCl corresponding to pH levels of plants treated with CA (pH 5.5–5.8 for 0.1 mM CA and pH 4.5–4.8 for 0.25 mM CA). By day 12 of the treatment period, plants treated with both levels of CA had significantly higher leaf diffusive resistances than control plants. Plants grown at the corresponding pH levels experienced higher diffusive resistances later in the treatment period (day 21). Transpiration was similarly affected with treated plants showing relatively higher transpiration rates compared to controls. Chlorophyll fluorescence was significantly lower than controls in all treated plants by end of the treatment period. The stable carbon isotope ratio (13C:12C) in these plants was higher than controls. These data show that a disruption of plant water relations is the primary mechanism of plant growth inhibition.
    Materialart: Digitale Medien
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  • 3
    Digitale Medien
    Digitale Medien
    Springer
    Journal of chemical ecology 19 (1993), S. 559-568 
    ISSN: 1573-1561
    Schlagwort(e): Juglone ; allelopathy ; allelochemical ; photosynthesis ; chioroplast ; mitochondria ; Lemna minor ; Glycine max
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie , Chemie und Pharmazie
    Notizen: Abstract The impacts of juglone on plant growth and several other physiological functions were evaluated in this study. Juglone inhibitedLemna minor growth, chlorophyll content, and net photosynthesis at treatments between 10 and 40μM. Soybean leaf disks vacuum infiltrated with as little as 10μM juglone had reduced photosynthesis. Oxygen evolution by chloroplasts isolated fromPisum sativum was inhibited by juglone with an I50 of 2μM. Micromolar treatments of juglone stimulated oxygen uptake in mitochondria isolated fromGlycine max. These data suggest perturbations of chloroplast and mitochondrial functions may contribute to plant growth reductions observed in juglone-mediated allelopathy.
    Materialart: Digitale Medien
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  • 4
    Digitale Medien
    Digitale Medien
    Springer
    Journal of chemical ecology 19 (1993), S. 369-375 
    ISSN: 1573-1561
    Schlagwort(e): Sorgoleone ; allelochemical ; allelopathy ; photosynthesis ; chloroplast ; root exudate ; Sorghum bicolor
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie , Chemie und Pharmazie
    Notizen: Abstract The aim of this investigation was to determine if sorgoleone (SGL), ap-benzoquinone inSorghum bicolor root exudate, is a photosynthesis inhibitor. Assays usingGlycine max leaf disks showed concentrations as low as 10μM SGL inhibited oxygen evolution more than 50%. Tests conducted on chloroplasts isolated fromPisum sativum showed that SGL is a powerful inhibitor of CO2-dependent oxygen evolution. Using a chloroplast suspension equivalent to 80–100μg chlorophyll, the I50 was approximately 0.2μM SGL. These data indicate inhibition of photosynthesis is part of the explanation for growth reduction caused by this allelochemical.
    Materialart: Digitale Medien
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  • 5
    ISSN: 1573-5079
    Schlagwort(e): photosynthesis ; bacteriochlorophyll ; electron acceptor ; iron-sulfur center ; Photosystem I ; heliobacteria
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie
    Notizen: Abstract Treatment of membranes ofHeliobacillus mobilis with high concentrations of the chaotropic agent urea resulted in the removal of the iron-sulfur centers FA and FB from the reaction center, as indicated by EPR spectra under strongly reducing conditions. In urea-treated membranes, transient absorption measurements upon a laser flash indicated a recombination between the photo-oxidized primary donor P798+ and a reduced acceptor with a time constant of 20 ms at room temperature. Benzylviologen, vitamin K-3 and methylene blue were found to accept electrons from the reduced acceptor efficiently. A differential extinction coefficient of 225–240 mM−1 cm−1 at 798 nm was determined from experiments in the presence of methylene blue. Transient absorption difference spectra between 400 and 500 nm in the presence and absence of artificial acceptors indicated that the electron acceptor involved in the 20 ms recombination has an absorption spectrum similar to that of an iron-sulfur center. This iron-sulfur center was assigned to be analogous to FX of Photosystem I. Our results provide evidence in support of the presence of FX in heliobacteria, which was proposed on the basis of the reaction center polypeptide sequence (Liebl et al. (1993) Proc. Natl. Acad. Sci. USA 90: 7124–7128). Implications for the electron transfer pathway in the reaction center of heliobacteria are discussed.
    Materialart: Digitale Medien
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  • 6
    Digitale Medien
    Digitale Medien
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 4 (1983), S. 438-448 
    ISSN: 0192-8651
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Biochemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie , Informatik
    Notizen: Theoretical studies are presented, aimed at the elucidation of through-space effects exerted by bridge-head oxygen and nitrogen atoms on cisoidal proton spin-spin coupling constants in 7-hetero-substituted norbornanes. The finite perturbation theory intermediate neglect of differential overlap (INDO) self-consistent field (SCF) molecular orbital (MO) method, modified according to the description given by Barfield [J. Am. Chem. Soc., 102, 1 (1980)], was employed. It is predicted that the known nonequivalence between Jendo-endo and Jexo-exo in norbornanes, which is in part mediated by the bridgehead methylene group (Barfield transmission effect), also occurs in 7-heteronorbornanes. A trend is recognized in which the nonequivalence induced by oxygen is rather smaller than that induced by the rear lobe of the N—H bond or by the nitrogen lone pair. It is shown that the Barfield effect also explains the observed nonequivalence between cisoidal H—Cβ—Cγ—H and H—Cγ—Cδ—H couplings in prolines. The calculations also predict similar, though smaller, effects on cisoidal couplings in the tetrahydrofuranyl ring system. Special attention was paid to the practical consequences of the existence of this effect with regard to the pseudorotation analysis of the five-membered sugar ring in nucleic acids. It is found that, in addition to the recently introduced correction for electronegativity and orientation of substituents [Haasnoot, de Leeuw, and Altona, Tetrahedron 36, 2783 (1980)], a cos2 dependency of 3Jcis upon the phase angle of pseudorotation must be taken into account, especially in the case of deoxyribofuranoses.
    Zusätzliches Material: 10 Ill.
    Materialart: Digitale Medien
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  • 7
    ISSN: 0192-8651
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Biochemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie , Informatik
    Notizen: An evaluation of the CHARMm force field for small molecules is described. Using different force field conditions and computational techniques, a wide variety of compounds are analyzed. rms deviations of Cartesian coordinates for 49 diverse organic molecules taken from the Cambridge Crystallographic Data Base and internal coordinate geometries for 28 other molecules are reported. Results are described with different dielectrics, dihedral constraints, and crystal packing to allow analysis of deviations from experimental data and give precise statements of the reliability of the parameters used in the force field. Torsional barriers (rms = 0.4) and conformational energy differences (rms = 0.4) are examined and comparisons made to other force fields such as MM2, Tripos, and DREIDING. The results confirm that CHARMm is an internally consistent all purpose force field with energy terms for bonds, angles, dihedrals, and out-of-plane motions, as well as nonbonded electrostatic and van der Waals interactions. Reported CHARMm results (rms = 0.006 Å for bonds, rms = 1.37° for angles, and rms = 3.2° for dihedrals) are in excellent agreement with high quality electron diffraction data. © 1992 by John Wiley & Sons, Inc.
    Zusätzliches Material: 5 Tab.
    Materialart: Digitale Medien
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  • 8
    Digitale Medien
    Digitale Medien
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 4 (1983), S. 428-437 
    ISSN: 0192-8651
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Biochemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie , Informatik
    Notizen: A computer method for the calculation of the pseudorotational parameters in five-membered rings from vicinal proton spin-spin coupling constants is described. Some typical problems met in practice are discussed. Applications of the program in the conformational analysis of some substituted cyclopentanes are presented.
    Zusätzliches Material: 1 Ill.
    Materialart: Digitale Medien
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  • 9
    Digitale Medien
    Digitale Medien
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 11 (1990), S. 654-662 
    ISSN: 0192-8651
    Schlagwort(e): Computational Chemistry and Molecular Modeling ; Biochemistry
    Quelle: Wiley InterScience Backfile Collection 1832-2000
    Thema: Chemie und Pharmazie , Informatik
    Notizen: Previous 4-21G ab initio geometry optimizations of various conformations of the model dipeptides (N-acetyl N'methyl amides) of glycine (GLY) and the alanine (ALA) have been used to help refine the empirical force constants and equilibrium geometry in the CHARMM force field for peptides. Conformationally dependent geometry trends from ab initio calculations and positions of energy minima on the ab initio energy surfaces have been used as guides in the parameter refinement, leading to modifications in the bond stretch, angle bending, and some torsional parameters. Preliminary results obtained with these refined empirical parameters are presented for the protein Crambin. Results for the cyclic (Ala-Pro-DPhe)2 are compared with those from other calculations. It seems that the dihedral angle fit achieved by the new parameters is significantly improved compared with results from force fields whose derivation does not include ab initio geometry trends.
    Zusätzliches Material: 2 Ill.
    Materialart: Digitale Medien
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