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  • 1
    ISSN: 1573-3904
    Keywords: coupling reagents ; HATU ; hindered amino acids ; solid phase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The difficulty during SPPS in acylating thesecondary amino group of Htc, a locally constrainedtyrosine, can be correlated with the steric hindranceof the amino acid or with the conformation of the growingpeptide chain. Our experimental data indicate that theavailability of the Htc amino group is associated with itssteric hindrance rather than a conformational effectof the peptide chain.An optimized solid phase automated protocol for Htcis reported. Under optimal conditions, Fmoc-aminoacids with hindered side chains were incorporated inapproximately 99% yield using HATU as couplingreagent. Unhindered side chain amino acid acylated thesecondary amino group of Htc in good yield underclassical HBTU/HOBt coupling conditions.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-3904
    Keywords: coupling reagents ; HATU ; hindered amino acids ; solid phase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary The difficulty during SPPS in acylating the secondary amino group of Htc, a locally constrained tyrosine, can be correlated with the steric hindrance of the amino acid or with the conformation of the growing peptide chain. Our experimental data indicate that the availability of the Htc amino group is associated with its steric hindrance rather than a conformational effect of the peptide chain. An optimized solid phase automated protocol for Htc is reported. Under optimal conditions, Fmoc-amino acids with hindered side chains were incorporated in approximately 99% yield using HATU as coupling reagent. Unhindered side chain amino acid acylated the secondary amino group of Htc in good yield under classical HBTU/HOBt coupling conditions.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-3904
    Keywords: dermorphin analogues ; opioid peptides ; receptor selectivity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Dermorphin structure–activity relationships toward μ and δ opioid receptors were investigated using a series of synthetic peptides, in which the aromatic residues at positions 1 or/and 3 of the N-terminal tetrapeptide analogue H-Tyr-d-Arg-Phe-β-Ala-NH2 were replaced by unnatural or constrained amino acids.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1573-3904
    Keywords: dermorphin analogues ; opioid peptides ; receptor selectivity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary Dermorphin structure-activity relationships toward μ and δ opioid receptors were investigated using a series of synthetic peptides, in which the aromatic residues at positions 1 or/and 3 of the N-terminal tetrapeptide analogue H-Tyr-d-Arg-Phe-β-Ala-NH2 were replaced by unnatural or constrained amino acids.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1075-2617
    Keywords: conformational constraints ; CD spectroscopy ; fluorescence quenching ; synthetic peptides ; tyrosine phosphorylation ; Chemistry ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We synthesized by classical solution methods three conformational constrained analogues of EDNEYTA, a heptapeptide sequence that represents the common major autophosphorylation site of the protein tyrosine kinases (PTKs) of the Src family. The correlation between the different structural properties induced by the modifications of the native sequence and the propensity of the peptides to act as PTK substrates was examined. The kinetic data obtained indicate that the introduction of the tyrosine-analogue constraints Tic(OH) and MeTyr, which block the ring flexibility, completely prevents the phosphorylation catalysed by the kinases Lyn and Fgr. On the other hand PTKIIB/p38syk can phosphorylate the two derivatives albeit with an efficiency lower than that found with the native sequence. A third derivative contained side chain to side chain cyclization. This analogue, in which the freedom of the phenolic moiety is not altered, can be phosphorylated by all the PTKs tested with kinetic constants comparable to the parent peptide.
    Additional Material: 11 Ill.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Peptide Science 4 (1998), S. 33-45 
    ISSN: 1075-2617
    Keywords: conformational studies ; -OBg esters ; protein tyrosine kinase ; src-PTK ; synthetic peptides ; tyrosine phosphorylation ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Two Tyr residues are supposed to play a crucial role in the regulation of protein tyrosine kinases of the Src family. Autophosphorylation of Src Tyr416 correlates with enzyme activation, while phosphorylation of C-terminal Tyr527 by Csk gives rise to inactive forms of Src kinases.It has previously been demonstrated that the Src-like tyrosine kinase expressed by the oncogenelyndisplays a particularly high affinity (Km20 μm) toward the dimeric linear and cyclic derivatives of the heptapeptide H-Glu-Asp-Asn-Glu-Tyr-Thr-Ala-OH which reproduces the main autophosphorylation site of most of the Src enzymes. Under the experimental conditions used only one Tyr residue of the dimeric sequence can be phosphorylated [P. Ruzza, A. Calderan, B.Filippi, B. Biondi, A. Donella Deana, L. Cesaro, L. A. Pinna & G. Borin (1995) Int. J. Peptide Protein Res. 45, 529-539].The present study addresses the problem of the efficiency displayed by Lyn towards the two Tyr residues located at positions 5 and 12 of the dimeric peptide. To this purpose, two tetradecapeptides were synthesized by the classical solution method, each containing one of the two Tyr residues alternatively replaced by Phe, and the corresponding univocal cyclic form. A possible correlation between the different structural properties induced by the modifications of the native sequence and the ability of the peptides to act as Lyn substrates was noted. The kinetic data obtained indicate that Lyn phosphorylates the residues located at different positions in the two linear analogues differently. In particular, while the Tyr5, Phe12 derivative presents aKmvalue similar to those obtained for the dimeric linear and cyclic unmodified analogues, theKmvalue of the Phe5, Tyr12 derivative is two-fold higher than those found for the above-mentioned peptides. Moreover, as previously reported for the linear and cyclic dimeric forms of the native sequence, in the mono-tyrosine containing series of dimers the still conformationally flexible cyclic derivative shows a phosphorylation efficiency two-fold higher than those found for the linear derivatives. © 1998 European Peptide Society and John Wiley & Sons, Ltd.
    Additional Material: 7 Ill.
    Type of Medium: Electronic Resource
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  • 7
    ISSN: 1573-3904
    Keywords: lactam bridge peptides ; tyrosine kinases ; tyrosine phosphorylation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The heptapeptide EDNEYTA, which reproduces the main autophosphorylation site of Src, has been previously shown to be a good substrate for both Src and Syk tyrosine kinases [Ruzza, P., et al., J. Pept. Sci., 2 (1996) 325]. Four lactam bridge conformationally constrained analogues of this peptide were synthesized by classical solution methods and screened for their suitability as c-Fgr and Syk tyrosine kinase substrates. The kinetic data obtained indicate that the different rings of the lactam peptides influence the capability of the peptides to act as PTK substrates. In general cyclization decreases the peptide phosphorylability, however the sequence containing the greatest lactam ring, ED(EEYTK), resulted in an especially suitable and selective substrate for Syk tyrosine kinase.
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1573-3904
    Keywords: lactam bridge peptides ; tyrosine kinases ; tyrosine phosphorylation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary The heptapeptide EDNEYTA, which reproduces the main autophosphorylation site of Src, has been previously shown to be a good substrate for both Scc and Syk tyrosine kinases [Ruzza, P., et al., J. Pept. Sci., 2 (1996) 325]. Four lactam bridge conformationally constrained analogues of this peptide were synthesized by classical solution methods and screened for their suitability as c-Fgr and Syk tyrosine kinase substrates. The kinetic data obtained indicate that the different rings of the lactam peptides influence the capability of the peptides to act as PTK substrates. In general cyclization decreases the peptide phosphorylability, however the sequence containing the greatest lactam ring, ED(EEYTK), resulted in an especially suitable and selective substrate for Syk tyrosine kinase.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We report details of the chemical synthesis of the dodecapeptide corresponding to the calcium binding loop III of bovine brain calmodulin (sequence 93-104) and its fragments 96-04, 93-98, and 99-104.The preparation of the peptides employed classical solution methods and a fragment-condensation strategy. The major difficulties were encountered during the synthesis of the peptides containing the N-terminal sequences-Gly-Asn-Gly- and -Asp-Lys-Asp-Gly-Ans-Gly-, in which α-β shift side reactions were observed.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The conformational and ion binding properties of the sequences 93-104, 96-104, and 93-98 of domain III of bovine brain calmodulin (CaM) have been studied by CD and Tb3+-mediated fluorescence. In aqueous solution the interaction of all fragments with Ca2+ and Mg2+ ions is very weak and without any effect on the peptide conformation, which remains always random. In trifluoroethanol the interaction is very strong and the different fragments exhibit very distinct binding properties. In particular, the dodecapeptide fragment 93-104, and its N-terminal hexapeptide 98-104, bind calcium and magnesium with a very high binding constant (Kb 〉 105M-1), undergoing a substantial conformational change. The structural rearrangement is particularly evident in the hexapeptide fragment, which tend to form a β-bend. The C-terminal nonapeptide fragment 96-104 interacts with calcium and magnesium more weakly, and the binding process causes a decrease of ordered structure. These results suggest that, even in the entire dodecapeptide sequence corresponding to the loop of domain III of CaM, the calcium binding site is shifted toward the N-terminal hexapeptide segment. This interpretation is consistent with the results of crystallographic studies of CaM, which show that the calcium ions are located toward the amino terminal portion of the loop.
    Additional Material: 14 Ill.
    Type of Medium: Electronic Resource
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