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  • Articles: DFG German National Licenses  (207)
  • 1985-1989  (207)
  • 1985  (207)
  • Physical Chemistry  (118)
  • Biochemistry  (89)
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  • Articles: DFG German National Licenses  (207)
Material
Years
  • 1985-1989  (207)
Year
  • 1
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985) 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 1-4 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: It is noticed that inclusion of an electrostatic term in the molecular-mechanical treatment of hydrocarbons would compel the nonbonding parameters of different force fields to become more alike than they are at present. Apart from removing the discontinuity in passing from the calculation of an unfunctionalized parent compound to the calculation of its functionalized derivatives, it is expected that the inclusion would improve results for the hydrocarbons themselves.
    Additional Material: 2 Ill.
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  • 3
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 5-8 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: We present energy component analysis calculations on alkali atom (Li,Na) hydride (H2O,NH3,H2S) interactions and compare these with corresponding (Li+ … NH3) cation … hydride interactions. In contrast to cation hydride interactions, the neutral atom-hydride interactions are shown to involve considerable contributions from all energy components.
    Additional Material: 1 Tab.
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  • 4
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 28-38 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The values of log10 P (partition coefficient, in octanol/water) were calculated for about 200 organic molecules of diverse structures and functionalities. The method involves a simple procedure and appears accurate enough for semiquantitative applications. Further, this method of calculating log10 P values was shown to be successful in providing a better quantitative structure activity relationship (QSAR) than the Hansch-type approach in the study of inhibitory activity of substituted phenols on Bacillus Subtilis spore germination.
    Additional Material: 5 Tab.
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  • 5
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A computer program SURVIB is described for calculating vibrational anharmonicity constants for polyatomic molecules. The program requires as input a grid of calculated energies in the vicinity of a stationary point. This grid is fit, in a least squares sense, to a polynomial function of the internal coordinates. This analytic representation of the energy surface is employed in a normal mode analysis, and the energy is reexpanded as a polynominal function of the normal mode coordinates (expressed as vectors in the mass-weighted atomic Cartesian coordinate space). The resulting coefficients are used in a second-order perturbation theory analysis to obtain the vibrational anharmonicity constants. Also reported is an application of this program to formaldehyde employing ab initio, RHF, MP2, MP3, and RHF-CI calculations. The spectroscopic constants obtained for H2CO are in good agreement with experimentally derived values recently reported by Reisner.
    Additional Material: 9 Tab.
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 56-60 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: α↑HF and α↓HF are derived for use in spin polarized Hartree-Fock-Slater programs. They are assumed to depend only on the number of up and down spin electrons in the atom. The calculated eigenvalues show a slight improvement only for carbon, nitrogen, and oxygen.
    Additional Material: 4 Ill.
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  • 7
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Conformational energy profiles were calculated for τ1, the C—C—C=O torsion, and τ2, the C—C—C—C torsion, of methyl butanoate, using Pulay's ab initio gradient procedure at the 4-21G level with geometry optimization at each point. In addition, the structures of seven conformations were fully relaxed, including the energy minima (τ1, τ2) = (0, -60), (0, 180), (120, 180), (120, -60), and the maxima (0, 0), (180, 180), and (60, -60). The calculated geometries confirm the previously formulated rule that, in saturated hydrocarbons, a C—H bond trans to a C—C bond (C—Hs) is consistently shorter than a C—H bond (C—Ha) trans to another C—H bond. Specifically, for X—C(α) (= O)—C(β)—C(γ)—C(δ) systems, the following rules can be formulated, incorporating results from previous studies of butanal, butanoic acid, and 2-pentanone: (1) C(δ)—Hs 〈 C(δ)—Ha in all the conformers in which the δ-methyl group is remote from the ester group; whereas, in all the conformers in which nonbonded interactions are possible between the C(δ)-methyl and the ester groups, the bonding pattern is affected by a C—H⃛O=C interaction. (2) In the most stable conformers, (0, 60), C(β)—Ha 〈 C(β)—Hs, and C(γ)—Ha 〈 C(γ)—Hs, regardless of X. (3) The average C—C bonds in the τ2 = 180° conformers are consistently shorter than those with τ2 = 60° (compared at τ1 constant). In the most stable conformations (τ1 = 0°, τ2 = 60° or 180°), the bonding sequence is consistently C(α)—C(β) 〈 C(β)—C(γ) 〈 C(γ)—C(δ); whereas, when τ1 = 120°, C(α)—C(β) 〈 C(β)—C(γ) 〉 C(γ)—C(δ).
    Additional Material: 5 Ill.
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 76-76 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 78-78 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 77-77 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Type of Medium: Electronic Resource
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  • 11
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 88-92 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: If numerical configuration selection procedures are used in MRDCI calculations, the full MRDCI energy may be estimated by adding energy corrections obtained by perturbation theory. Accurate results may then be obtained by including all selected CFs in the zero-order function instead of only the reference CFs.
    Additional Material: 4 Tab.
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  • 12
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 93-107 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Repulsion and dispersion parameters for alkali-metal halide diatomic molecules were computed by ionic Rittner and truncated Rittner models with radial dependent repulsion terms. Experimental data on the bond energies, the equilibrium interionic distances, and the spectroscopic frequencies were employed for the purpose. The polarizabilities used were also computed from the experimental dipole moments of alkali-metal halides. The potential parameters obtained were compared with parameters from other sources and checked for consistency. The computed potential parameters of alkali-metal halide monomer molecules were used to predict the energetics and geometries for alkali-metal halide dimer molecules. The predicted values are in good agreement with experiment and other calculations indicating the consistency and reliability of the potential employed. Although the magnitude of repulsive and dispersive energy terms varies with potential functions employed, the difference between the two for a molecule is constant. The repulsive term is more sensitive than the attractive term. The uncertainty in the exponential repulsion results in an inaccurate representation of the attractive contribution. Introduction of the radial-dependent repulsion term changes the relative magnitudes of repulsive and dispersive parameters and hence the relative contribution to the total potential with monomers. But this has no significant effect on the energetics and geometries of the dimers.
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  • 13
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 142-147 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Localized molecular orbitals (LMOs) for several octahedral complexes are presented. Wavefunctions are calculated within the PRDDO approximations and localized by the Boys criterion. Complexes of general formula (NH3)x(CO)6-xM, M = Cr0 or Mn+ and x = 1, 2, or 3 illustrate the general trends for carbonyl complexes. Weak to moderate π-bonding results in three equivalent inner shell LMOs dominantly of metal 3s, 3p and 3d character but highly delocalized to the carbonyls. These three LMOs flank the M-CO bond axis. Other π back-bonding situations result in metal-ligand double bonds which are nonequivalent and have σ-π separability [(NH3)5(py)Mn+] and also equivalent double bonds [(NH3)5(NO)Cr+].
    Additional Material: 7 Ill.
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  • 14
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985) 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
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  • 15
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 157-167 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Sets of atom equivalents have been developed which permit the estimation of heats of formation, ΔH°f298(g), from ab initio total energies (3-21G and 6-31G* basis sets). This extends the isodesmic reaction scheme of Pople and the group equivalents of Wiberg. A variety of small inorganic and organic molecules, including fluorocarbons, free radicals, carbocations, and protonated species give excellent agreement with experiment; average errors are less than 1 kcal/mol with unstrained hydrocarbons (both basis sets), and are on the order of 2 kcal/mol for all molecules considered (6-31G*; the 3-21G basis errors, as expected, usually are somewhat higher). The results substantiate Pople's early conclusions that Hartree-Fock theory provides a generally satisfactory description of classical molecules.
    Additional Material: 2 Ill.
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  • 16
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 173-181 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Atomic charges obtained with a previously published charge scheme are given for amino acids and peptides. In order to do this, a method of handling charged species with the basic scheme2,3 has been developed. The charges obtained for alkylammonium ions and carboxylate ions with the scheme are presented and compared with CNDO and ab initio values. The calculated experimental dipole moments of the zwitterionic forms of glycine, alanine and β-alanine are then discussed. Finally, the atomic charges obtained for the naturally occurring amino acids are given, both in the form of the N-acetyl-N′-methyl amino acid amides, used as models for the amino acid residues in enzymes, and as the free zwitterionic amino acids. The charges obtained show a good correlation with n. m. r. chemical shifts of both carbon and hydrogen atoms.
    Additional Material: 4 Ill.
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  • 17
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 189-199 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Ab initio MO calculations have been performed for neutral and cationic C2H2F2 structures. Olefinic and carbene structures are investigated for the neutral isomers, while olefinic, carbene, and fluoronium-type cations are found. Stability orders and rotational barriers are discussed in terms of orbital and Coulomb interaction. Contrary to previous studies, the higher stability of the geminal isomers is interpreted to be caused by Coulomb attraction.
    Additional Material: 5 Ill.
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  • 18
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A method of graphically exhibiting detailed information about a three-dimensional electron distribution function f(x,y,z) is described. Contour lines f = constant are drawn on a set of equidistant parallel planes that intersect the distribution, and a perspective view of all contours on all planes is displayed. Representative examples are given.
    Additional Material: 10 Ill.
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  • 19
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 216-228 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A method is described to analyze observed conformations for molecular fragments with more than three torsional degrees of freedom. The method is an adaption of statistical cluster analysis to multidimensional, symmetric, periodic distributions of data points. Application to the molecular fragment M(PPh3)2 with eight torsional degrees of freedom reveals a model of conformational interconversion. The model implies gearing motion of the two PC3 fragments alternating with stepwise inversions of the helicities of the PPh3-propellers.
    Additional Material: 9 Ill.
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  • 20
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985) 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
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  • 21
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 148-155 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: We have carried out a series of molecular mechanics calculations on the alkali ion complexes of valinomycin. For the ions Na+, K+, Rb+, and Cs+ we have found three-fold rotationally symmetric conformations as the lowest energy structures, while for Li+ a markedly asymmetric configuration is preferred. The relative free energies of the complexes show that Li+ is by far the poorest binding partner in solution, followed by Na+, which is in turn far poorer than any of the three larger ions. The binding selectivity derives from the slower variation of the complexation free energy with ionic size than the ionic solvation free energy, so that the ionophore is unable to compete with the solvent for the smaller ions. Our calculated strain energies suggest that valinomycin's failure to form complexes with the smaller ions in solution is due partially to the rigidity of the ionophore structure, which prevents the central cavity from contracting to accommodate them. Certain geometric criteria indicate that K+ provides the best fit to the binding site, although there is some inconsistency between the energetic and geometric criteria of binding ability.
    Additional Material: 4 Ill.
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  • 22
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 168-172 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The protonation energies of alkylated derivatives of NH3 and OH2 are calculated at the Hartree-Fock level with the split-valence 4-31G basis set. The methyl, dimethyl, and ethyl amines are studied; oxygen bases include methanol, dimethylether, and ethanol. The geometries of each molecule and its protonated analog are fully optimized. It is found that protonation leads to significant changes in the molecular structures. In particular, the bonds to the N and O atoms are substantially elongated, especially when the other atom involved is C rather than H. The calculated absolute proton affinities are somewhat larger than the experimental values. However, the differences in protonation energies of the various molecules relative to one another agree quantitatively with experiment. Replacement of one H atom of the base by a methyl group induces an increase in proton affinity of some 10 kcal/mol. If a second methyl group is added to the N or O atom, a further increment of about 70% this amount is noted. On the other hand, placement of the second C atom on the first methyl group (to form an ethyl substituent) leads to a smaller increase (∼30%). The magnitudes of these alkyl substituent effects are somewhat larger for the oxygen bases than for the amines.
    Additional Material: 4 Tab.
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  • 23
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 182-188 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The lowest potential energy surfaces of NO3 have been investigated using CASSCF and contracted CI methods, to determine if NO3 is an intermediate in the oxidation of nitric oxide. This reaction is observed to be termolecular where an intermediate is almost certainly formed. The calculations, which were performed in C2v symmetry, show that the form of NO3 which has a near D3h geometry should not be possible to reach from ground state NO and O2. The energy of this isomer of NO3 is calculated to be 25 kcal/mol higher in energy than separated NO and O2. Furthermore, NO + O2 is separated from NO3 by very high barriers. The C2v constrained barrier is as high as 145 kcal/mol, which makes it very unlikely that NO3 could be formed even along less symmetric pathways. The origin of the barriers are analyzed, and it is shown that a special type of mechanism is involved for the state with the lowest barrier. In this mechanism, which was observed recently also for NiH2, the occupation in each symmetry changes only by one unit in each step of the reaction. The only isomer of NO3 which could be formed is a weak van der Waals complex with a very long bond distance of 6.5 a.u. N2O2 does, however, in this respect seem to be a more likely intermediate with its shorter bond distance of 4.5 a.u. Calculations around the D3h equilibrium further show that 2B2 is the ground state of this isomer of NO3 with 2A2 and 2B1 slightly higher in energy.
    Additional Material: 4 Tab.
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  • 24
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 200-208 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The CGTO integral evaluation, SCF, SCF-gradient, integral transformation, and MR-CI (SD) steps of the COLUMBUS system of programs have been adapted for the CYBER 205. A description is given of our efforts and the partly heavy modifications necessary to exploit the potential of this supercomputer and to avoid its shortcomings. Typical timings are reported, vector and scalar performance are compared.
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  • 25
    Electronic Resource
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    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 229-236 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A new instrument of exploration can be used to develop unrecognized connections among points in a variety of geometric designs. Operational methods are used to derive the relationships, and a new approach to extremum location is demonstrated. The technique is suitable for interpolation problems which arise in experimental design and the treatment of data.
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  • 26
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    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 249-255 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The direct interconversion of the two C3-symmetric enantiomeric conformations of triethylamine, via C—N bond rotation, has been studied by molecular mechanics (MM2) calculations. The MM2 calculations have been used to characterize the minima (equilibrium geometries) and first-order saddle points (transition states) for this process. For one interconversion, there are five saddle points and six minima. The highest energy saddle point results from the uncoupled rotation of one ethyl group to eclipse the lone pair. Two of the barriers result from coupled rotation of two ethyl groups in close passage.
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  • 27
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    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 237-248 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The new contracted Gaussian-type orbitals (CGTOs) for molecular calculations have been developed from Li to Ne. The CGTOs are minimal type, i.e. composed of two s-type CGTOs, s1, s2, and one p-type CGTO, p1. They are new family of CGTOs given by Tatewaki and Huzinaga, and others. In the previous works three primitive GTOs are used for s2, which is the main part of the 2s orbital, whereas four primitive GTOs are employed in the present work. The sets generated are [54/5], [64/5], [64/6], [74/6], and [74/7]. In almost all the cases the errors in the 2s and 2p orbital energies are smaller than those of DZ. The resulting 2s orbitals are close to the orbitals of the uncontracted GTO sets, (13/n) and (14/n) of Duijneveldt. It is found that the 2s and 2p orbitals given by [64/6], [74/6], and [74/7] are satisfactorily near to those of Hartree-Fock. The basis sets [54/5], [64/6], and [74/7] are applied to the N2 molecule in the split valence forms of [5211/311], [6211/3111], and [7211/4111]. Adding the d-type polarization functions from one through three, the quality of the basis sets has been examined. All of the three sets show good behavior and the sets augmented with three d-type polarization functions give almost entirely the same results as the very extended basis set.
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  • 28
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    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 282-286 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The orbital behavior of both the singlet and triplet Rydberg series for 1sns configurations of the He atom has been investigated using one- and two-configuration Hartree-Fock wave functions. The core orbital within the triplet series changes negligibly; however, a contract trend is noticeable as the Rydberg orbital penetrates more into the core region, which is in contrast to that found in the 1s2ns 2S Rydberg series of Li atom. Although some properties of the whole atom can be calculated, the core relaxation of the singlet series can not be drawn without ambiguity because a two-configuration correlated wave function has to be used, and thus the orbital picture is lost.
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  • 29
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    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985), S. 287-295 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Relativistic effective potentials (REP) are now widely used in molecular electronic structure calculations. Tests of these REP are needed to assess their accuracy. This can now be done for AgH and AuH since Lee and McLean have published Dirac-Fock calculations for these molecules. Comparative SCF calculations have been performed for two types of effective potential. Satisfactory agreement between the effective potential results and Dirac-Fock values is found for spectroscopic constants and dipole moments, which supports the use of these potentials for heavy atom containing molecules.
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  • 30
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    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 6 (1985) 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Type of Medium: Electronic Resource
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  • 31
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    Journal of Computational Chemistry 6 (1985), S. 302-311 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Molecular mechanics calculations (MM2) are used to elucidate energies and structures of possible reaction products in olefin metathesis of 2,3-dimethylnorbornadiene. The comparison of experimental and calculational results concerning norbornadiene itself shows excellent agreement both in energy and structure. The predicted isomers of lowest energy in a series of three different reaction products seem highly reliable and will lead to a more precise interpretation of the olefin metathesis reaction and the resulting product distribution. Some sixty different isomers have been considered and structures and energies are given. Nonplanarity of double bonds and van der Waals repulsions of closely related hydrogen atoms in polycyclic cycloolefins are considered in some detail. In order to reduce computing time and efforts in obtaining starting coordinates, a computer program for some dimeric structures was devised, which can combine minimized structures stemming from MM2 calculations.
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  • 32
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    Journal of Computational Chemistry 6 (1985), S. 350-359 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A very efficient algorithm for determining the geometrically feasible binding modes of a flexible ligand molecule at the receptor site is presented. It is based on distance geometry but maintains the requirements of three dimensions. The distance geometry manipulation can superimpose two bodies without explicitly calculating the necessary rigid rotation and translation. The whole conformation space of a flexible molecule can be efficiently examined by considering only a finite number of conformational points. The method is suitable only when the criterion for superposition is some minimum distance limit. It cannot, however, give the exact distance between two points in two different bodies.
    Additional Material: 7 Ill.
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  • 33
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    Journal of Computational Chemistry 6 (1985), S. 343-349 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: General expressions for monocenter electron repulsion integrals in a basis of real atomic orbitals are derived in terms of the radial integrals Rabcdk. The final expressions for these integrals can be classified into five main classes which are characterized by the angular part of the real atomic orbitals. For a basis of real s, p, d, and f AO's the total number of monocenter repulsion integrals is 65536, from which 6652 are different from zero. The nonzero integrals can be classified into 430 groups which contain integrals of equal value.
    Additional Material: 1 Tab.
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  • 34
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    Journal of Computational Chemistry 6 (1985), S. 514-519 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Reequilibration processes are often encountered within solids and they have long been described mathematically. However, computation of reequilibration data over entire processes is often difficult. An algorithm has been developed specifically for this purpose. It allows a fast and efficient computation of reequilibration parameters. Anisotropic diffusion can, moreover, be taken into account.
    Additional Material: 4 Ill.
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  • 35
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    Journal of Computational Chemistry 6 (1985), S. 432-436 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: We describe a real-time docking method using molecular graphics and high-speed calculation of the energy of interaction between a drug and a receptor. A three-dimensional tabulation of the potential is computed prior to the docking experiment, and the total interaction energy is calculated and updated on the display screen in real-time to provide immediate visual feedback to the user as the drug molecule is moved inside the receptor pocket. The “Simplex” method is then used to minimize the energy of interactions after each docking. Using this real-time method, it is now possible to examine rapidly the interactions of a large number of drugs and their analogues with receptor molecules. As an application, the interaction of thyroid hormone and its analogues with prealbumin is considered. The final interaction energies of this very rapid method compare well with those calculated by more orthodox means, while also providing visual feedback on both molecular geometry and energy.
    Additional Material: 3 Ill.
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  • 36
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    Journal of Computational Chemistry 6 (1985), S. 455-461 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The thermal limiting high-pressure unimolecular rate constant k∞ represents, operationally, the Laplace transform of the product of microcanonical rate constant for decomposition of molecules having specified energy E [k(E)] and the density of states [N(E)]. By inversion, it is possible to recover k(E)N(E), from which one can obtain the energy dependence of k(E) and the pressure dependence of kuni, the thermal general-pressure unimolecular rate constant. This article examines numerical aspects of three methods of inversion, their reliability and dependence on sampling, i.e., on the number of available experimental data points, by comparing exact k(E) and kuni with those obtained by inversion. It turns out that the method of steepest descents is the best all-round performer.
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  • 37
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    Journal of Computational Chemistry 6 (1985), S. 478-480 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The molecular mechanics (MMP2) description of the torsion of a methyl group attached to a conjugated system has been improved by using bond order dependent torsional force constants.
    Additional Material: 1 Tab.
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  • 38
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    Journal of Computational Chemistry 6 (1985), S. 481-485 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A corrected Born equation, which describes the solute-dipolar solvent interaction by placing the charges of the atoms of the solute at their position in space inside a spherical cavity of the solvent, is used to calculate the solvent effect on three systems: the hydrated OH- ion, the lithiated aziridine, and the lithiated oxirane. It is found that the solvent effect stabilizes the addition of a water molecule to the OH-(H2O)3 system with the additional water acting as a proton donor. It is also found that the lithiation energy of aziridine and oxirane which are found to be 47 and 43 kcal/mol in gas-phase, respectively, decrease to 32 and 23 kcal/mol in water solution.
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  • 39
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    Journal of Computational Chemistry 6 (1985), S. 492-506 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The problem of chance correlations in studies of structure - activity relationships using multivariate linear regression techniques is addressed. Random correlations are simulated by scrambling real potency values in data bases consisting of molecules possessing various biological properties. The statistical parameters of these correlations are compared to those obtained using the actual potency/compound data pairs and it is noted that the most noticeable differences are in the magnitude of the F values for the overall regression. Cutoff points for this parameter are suggested, which, when implemented in the recently introduced CASE method that correlates biological activity with substructural descriptors, can serve to weed out effectively the majority of meaningless correlations.
    Additional Material: 3 Ill.
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  • 40
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    Journal of Computational Chemistry 6 (1985), S. 507-513 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: SINDO1 calculations were performed to study the reactivity of molecules with a valence number derived from the density matrix. A comparison of valence numbers was made for selected examples of rotation barriers, substituted strained molecules, radical gas phase reactions, and acid-base reactions. Relations between valence, geometry, and energy changes are discussed.
    Additional Material: 1 Ill.
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  • 41
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    Journal of Computational Chemistry 6 (1985), S. 520-532 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A method for preparing compact orbital and auxiliary basis sets for LCAO-LSD calculations has been developed. The method has been applied to construct basis sets for first row transition metal atoms from Sc to Zn for the 3dn-14s1 and 3dn-24s2 configurations. The properties of different expansion patterns have been tested in atomic calculations for the chromium atom.
    Additional Material: 1 Ill.
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  • 42
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: An iterative algorithm is described for finding topological equivalence, ordering, and canonical numbering of vertexes (atoms) in molecular graphs. Like the Morgan algorithm, it is based on extended connectivities but: (i) the latter are used hierarchically, i. e., the discrimination in the next iteration is carried out only for the vertices having the same extended connectivities (ranks) at the previous iteration; (ii) at equal extended connectivities, additional discrimination is introduced by the ranks of adjacent vertices; (iii) there is no “best name” search; (iv) three levels of complexity of chemical structures are distinguished and handled by different procedures.Two schemes of application of HOC procedures are presented: one directed towards a fast canonical numbering for coding systems, and another one yielding levels of topological equivalence allowing a unique topological representation of the molecule with possible applications to similarity search, structure-activity correlations, etc.
    Additional Material: 14 Ill.
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  • 43
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    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A topological code is devised on the basis of the unique topological representation of the molecule described in the preceding two parts of this series.1 By adding to the topological code additional chemical information on atoms and/or bonds, as well as stereochemical information, a chemical and respectively stereochemical code (SHOC) are also constructed. The advantages of the new linear codes are that they are convention-free codes, preserving the symmetry of molecular graph, and easily implemented either manually or by means of computer programs. By concentrating all topological, chemical, and stereochemical information, our code (SHOC) is more compact and more general than the codes based on several separate lists.
    Additional Material: 4 Ill.
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  • 44
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    Journal of Computational Chemistry 6 (1985), S. 581-586 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Different schemes are explored for the calculation of the proton transfer process in the hydrogen bonded cation [CH3OH · H · NH3]+. Results from ab-initio calculations with the STO-3G, 3-21G and 4-31G basis sets, are compared in search for an efficient reliable scheme to study the potential energy curves for the proton transfer. The curve constructed from the lowest energies calculated with the frozen optimized geometries of the two possible pairs of proton donor and acceptor fragments, (i.e., CH3OH2+/NH3 and CH3OH/NH4+) is in good agreement with that obtained when all the fragments of the hydrogen bonded complex are completely optimized simultaneously.
    Additional Material: 4 Ill.
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  • 45
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The computer implementation of the HOC procedures presented in Parts I, II and III of this series is based on the module principle. It contains a main program and seventeen subroutines in Fortran IV. The system is able to provide unique atom numbering and code for all kinds of chemical compounds in their tremendous variety of structures.
    Additional Material: 6 Ill.
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  • 46
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    Journal of Computational Chemistry 6 (1985), S. 598-609 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The many applications of the distance matrix, D(G), and the Wiener branching index, W(G), in chemistry are briefly outlined. W(G) is defined as one half the sum of all the entries in D(G). A recursion formula is developed enabling W(G) to be evaluated for any molecule whose graph G exists in the form of a tree. This formula, which represents the first general recursion formula for trees of any kind, is valid irrespective of the valence of the vertices of G or of the degree of branching in G. Several closed expressions giving W(G) for special classes of tree molecules are derived from the general formula. One illustrative worked example is also presented. Finally, it is shown how the presence of an arbitrary number of heteroatoms in tree-like molecules can readily be accommodated within our general formula by appropriately weighting the vertices and edges of G.
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  • 47
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    Journal of Computational Chemistry 6 (1985), S. 614-624 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: The cellular species formed in the hydrolysis of cis-Pt(NH3)2Cl2 (DDP), namely, cis-[Pt(NH3)2XY]n+ (X, Y = Cl-, H2O, OH-; n = 0, 1, 2) have been investigated theoretically using the relativistic and nonrelativistic extended Huckel molecular orbital method. Molecular orbital (MO) results for trans-DDP and its hydrolysis products are also reported for comparison. Transition energies, molar absorption coefficients (∊), and B terms from magnetic circular dichroism (MCD) derived from theory are presented for each of the species studied. The electronic absorption and MCD spectra of all the complexes are predicted to exhibit ligand field transitions arising primarily from excitations between the occupied Pt 5d orbitals and the unoccupied Pt 5d and 6pz orbitals, respectively. The 5d → 6pz transitions are expected to yield intense absorptions in the UV spectral region. Some intensity is generated in the d → d transitions as a result of the low symmetry of these complexes. Correlation of available experimental data with theory allows spectral assignments to be made and predicted. Substituent effects in the cis- and trans-isomeric species are discussed. Finally, the applicability of the EHMO method to these systems is examined.
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  • 48
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    Journal of Computational Chemistry 6 (1985), S. 634-646 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: This article presents a strategy to perform molecular dynamics simulations using parallel processing techniques on a parallel-distributed loosely coupled system consisting of IBM host computers (4341 and 4381) with attached scientific processors (FPS-164). This substantially enhances our ability to perform fast and more realistic large scale many-body trajectory simulations. A powerful extention of the computational range of molecular dynamics the parallel approach offers the opportunity to substantially reduce the simulation time to allow a longer simulation period to study more realistic models and larger systems. It is flexible and uses, for the most part, standard products and straightforward implementation with a broad range of applicability. The implementation of a simulation of water molecules with the inclusion of two- and three-body interactions is discussed. Some considerations in the design and implementation of parallel programs on a loosely coupled system are also presented.
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  • 49
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    Journal of Computational Chemistry 6 (1985), S. 652-655 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: We compare calculated total energies for 150 open-chain molecules using ab initio methodology and the PRDDO approximations. The bulk of the errors implicit in the PRDDO approximations are apparently of a one-center nature, i.e., they are due to the number and type of atoms in the molecule, and not the details of the molecular geometry. Atomic correction factors are developed which reduce the errors in the calculated total energy of PRDDO wave functions by a factor of eight relative to the ab initio reference calculations. PRDDO calculations on ring and cage compounds are shown to have additional systematic errors in the total energy.
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  • 50
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    Journal of Computational Chemistry 6 (1985), S. 662-673 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Benzylic anions were studied with the semiempirical MNDO molecular orbital method. Structural changes were analyzed as metal counterions and solvents were allowed to interact with the benzylic carbon. Generally, benzylic carbanions were found to be trigonal planar but became pyramidal or bent when metals were included in the calculation.
    Additional Material: 8 Ill.
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  • 51
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    International Journal of Chemical Kinetics 17 (1985), S. 11-15 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Recent interest in the measurement and the interpretation of heat capacities of activation has led to more rigorous methods to detect temperature-varient activation parameters. One such method devised by Blandamer and co-workers was applied to the sucrose hydrolysis data of Moelwyn-Hughes and Leininger and Kilpatrick. Both sets of investigators claimed that the energy of activation for sucrose inversion decreased with increasing temperature, while Heidt and Purvis and more recently, Kuhler's group contend that the energy of activation is constant. It was found that neither the data of Moelwyn-Hughes nor of Leininger and Kilpatrick warrant the inclusion of a temperature-dependent activation enthalpy.
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  • 52
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    International Journal of Chemical Kinetics 17 (1985), S. 157-165 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The thermal dehydrochlorination CF2ClCH3 → CF2 = CH2 + HCl has been studied in a static system between 637 and 758 K. It is a homogeneous, molecular first-order reaction and its rate constant is given by \documentclass{article}\pagestyle{empty}\begin{document}$$ {\rm log}_{{\rm 10}} {\rm }(k,{\rm s}^{ - {\rm 1}}) = - (53,400 \pm 100)/4.576{\rm T + (12}{\rm .21} \pm {\rm 0}{\rm .03)} $$\end{document} This reaction has also been studied in the presence of CCl4 and mixtures of CCl4 and HCl between 585 and 662 K. It is then accelerated and the initial rate increase is given by \documentclass{article}\pagestyle{empty}\begin{document}$$ v = d[{\rm CF}_{\rm 2} {\rm = CH}_{\rm 2} ]/dt = k' \left( {1 + k'' {\textstyle{{{\rm [HCl]}} \over {{\rm [CF}_{\rm 2} {\rm ClCH}_{\rm 3} {\rm ]}}}}} \right)^{{\raise0.5ex\hbox{$\scriptstyle 1$}\kern-0.1em/\kern-0.15em\lower0.25ex\hbox{$\scriptstyle 2$}}} [{\rm CF}_2 {\rm ClCH}_3 ]^{{\raise0.5ex\hbox{$\scriptstyle 3$}\kern-0.1em/\kern-0.15em\lower0.25ex\hbox{$\scriptstyle 2$}}} $$\end{document} with log10 (k′, L½ /mol½ · s) = -(41,650 ± 180)/4.576T + (10.84 ± 0.06) and log10 k″ = (7900 ± 180)/4.576T - (0.59 ± 0.06). A radical chain mechanism is shown to be consistent with these latter results.
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  • 53
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    International Journal of Chemical Kinetics 17 (1985), S. 254-254 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 54
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    International Journal of Chemical Kinetics 17 (1985), S. 559-571 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The kinetics of the reaction by which thallium(III) acetate oxidizes cyclohexene in glacial acetic acid medium, has been studied by UV spectrophotometric observation at 30°C. The consumption of thallium(III) acetate follows a second-order rate law exhibiting first-order dependence on each of thallium(III) acetate and cyclohexene; however, the first-order dependence on cyclohexene disappears at high cyclohexene concentrations as pseudo-first-order conditions prevail above 0.2 M cyclohexene. A steady-state model of the following form is proposed: where Tl, Cy, and Com are units of Thallium(III) acetate, cyclohexene, and a reaction complex. The value of k2 has been evaluated as 0.00027 and (k-1 + k2) as 0.0385k1. For low thallium(III) acetate concentrations the reaction kinetics follow the rate law: \documentclass{article}\pagestyle{empty}\begin{document}$$ d[{\rm Tl}]/dt = - 0.00027([{\rm Tl}] + \alpha)[{\rm Tl}]/(0.0385 + 2[{\rm Tl}] + \alpha) $$\end{document} where α = the excess concentration of cyclohexene over thallium(III) triacetate. For thallium(III) acetate concentrations above 0.02 M, double salt formation of thallium(III) acetate with product thallium(I) acetate removes thallium(III) acetate from the reaction and a modified rate law is observed. Runge-Kutta numerical solutions to the differential equations provide confirmation that the rate expressions are valid in predicting the observed concentrations of thallium(III) acetate.
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  • 55
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    International Journal of Chemical Kinetics 17 (1985), S. 591-600 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The kinetics of the binding of alizarin yellow G to six nonequivalent binding sites on bovine serum albumin were investigated, using the stopped flow and T-jump techniques. The first step in the reaction sequence is very fast, and is followed by a slower step which is suggested to be an internal rearrangement of the collision complex formed in the first step. This temporal sequence shows that the strong cooperativity between the first and second binding sites is not due to the existence of different conformations in equilibrium in free albumin, but rather to a ligand-induced change. Next, an additional, still slower transformation is observed. From the fact that this transformation is not rate-determining for the formation of higher complexes we conclude that it corresponds to a branch reaction. The higher complexes are again formed with very high rate constants. The first complex has a high negative value of both ΔH and ΔS° of formation. For the second and higher complexes, the heat of formation is much lower, and the standard entropy of formation is positive. The formation of these complexes is thus largely entropy-driven. The difference between the thermodynamic parameters of the first and subsequent ligands is in accordance with the assumption that only the binding of the first ligand entails significant structural changes.
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  • 56
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    International Journal of Chemical Kinetics 17 (1985), S. 613-628 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Relative rate constants for the removal of vibrationally excited OH in the ninth vibrational level of its ground electronic state [designated hereafter by OH† (9)] by interaction with a series of simple hydrocarbons at room temperature are reported. The reaction of hydrogen atoms with ozone was used to generate OH†(9) in a fast flow discharge system at 1.1 ± 0.1 torr total pressure. The decrease in the (9 → 3 band) Meinel band chemiluminescent emission intensity at 626 nm was followed as a function of the concentration of added organic or of a reference deactivator (O2), respectively, at a fixed reaction time; these data gave relative rate constants, k2X/k2O2, for the removal of OH†(9) by the organic. The relative rate constants determined in this study are as follows: C2H6, 2.7 ± 0.2; C3H8, 4.4 ± 0.4; n-C4H10, 7.5 ± 0.6; iso-C4H10, 7.3 ± 0.8; n-C5H12, 10.4 ± 0.7; C2H4, 22.9 ± 1.8; C3H6, 43.4 ± 1.4; cis-2-C4H8, 47.7 ± 3.1; C6H6, 29 ± 7. (Errors are two standard deviations of the weighted mean of experiments in two flow tubes with different wall coatings and carrier gases.) The implications of the trends in these rate constants for the relative contributions of energy transfer and reaction to the net removal of OH† (9) are discussed.
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  • 57
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    International Journal of Chemical Kinetics 17 (1985), S. 831-833 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Additional Material: 1 Ill.
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  • 58
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    International Journal of Chemical Kinetics 17 (1985), S. 849-858 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The decompositions of chlorine and chloromethanes over pyrolytic carbon surfaces have been studied by modulated beam mass spectrometry in a low-pressure flow reactor between 850-1280 K. Whereas CH3Cl is thoroughly stable, molecular chlorine readily dissociates by a first-order process with an activation energy about a half of its bond energy. The decompositions of CH2Cl2 and CCl4 over clean silica surfaces initially display marked autoacceleration associated with the formation of soot on reactor walls and reach limiting rates which are much faster than those predicted for their homogeneous pyrolysis under the same conditions.
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  • 59
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    International Journal of Chemical Kinetics 17 (1985), S. 931-955 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A continuous stirred tank reactor (CSTR) was used to study the gas-phase reaction between HO⋅ and toluene. HO⋅ was generated by the in situ photolysis of nitrous acid. Flow reactor operation at steady-state conditions with a residence time of 20 min allowed investigation of primary and very rapid secondary reactions. CSTR and batch reactor experiments were also performed with selected products. Both gas-phase and aerosol products were identified by chromatography and mass spectroscopy, with total product yields between 55 and 75% of reacted carbon. Toluene reaction products included cresols, nitrocresols, nitrotoluenes, 3,5-dinitrotouluene, benzaldehyde, benzyl nitrate, nitrophenols, methyl-p-benzoquinone, glyoxal, methylglyoxal, formaldehyde, methyl nitrate, PAN, and CO. The fraction of HO⋅ methyl hydrogen abstraction was calculated to be 0.13 ± 0.04. The ratio of reaction rate constants for nitrotoluene versus cresol formation from the HO⋅-adduct was calculated to be about 3.3 × 104. Also, the ratio of cresol formation versus O2 addition to the HO⋅-adduct was estimated to be ≥0.5 for atmospheric conditions. Comparisons of these measurements with previous values and the implications with respect to photochemical kinetics modeling of the atmosphere are discussed.
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  • 60
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    International Journal of Chemical Kinetics 17 (1985) 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 61
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    International Journal of Chemical Kinetics 17 (1985), S. 835-848 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The oxidation of nitrogen monoxide has been studied extensively between 226 and 758 K at pressures of NO and O2 ranging from about 0.2 to 30 torr. It has been shown that (i) the reaction is properly first order against oxygen and second order against nitrogen monoxide, as well under initial conditions as during the course of the reaction; (ii) the termolecular rate constant, k, first decreases with increasing temperature and reaches a minimum value at 600 K; (iii) the transition state theory is unable to describe this behavior correctly, (iv) under the present experimental conditions k can be represented either by \documentclass{article}\pagestyle{empty}\begin{document}$$ \log _{10} k({\rm l}^{\rm 2} {\rm mol}^{ - 2} {\rm s}^{ - 1}) = - (5.18 \pm 1.00) + (2.70 \pm 0.25){\rm log}_{{\rm 10}} T + (700 \pm 50)/T $$\end{document} or by \documentclass{article}\pagestyle{empty}\begin{document}$$ k({\rm l}^{\rm 2} {\rm mol}^{ - 2} {\rm s}^{ - 1}) = (350 \pm 100)10^{(390 \pm 50)/T} + (8000 \pm 2000)10^{ - (440 \pm 50)/T} $$\end{document} The latter equation is compatabile with a multiple-step mechanism.
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  • 62
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    International Journal of Chemical Kinetics 17 (1985), S. 901-924 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Using the method of freezing radicals in conjunction with ESR spectroscopic measurements, the kinetics of the thermal oxidation of methane has been studied under atmospheric pressure depending on the temperature, composition of the mixture, and nature of the surface of the reaction vessel. It has been shown that in a reactor treated with boric acid, the intermediates methylhydroperoxide and hydrogen peroxide are responsible for chain branching. It has been established that the leading active centers of the reaction are the HO2 radicals, while chain branching occurs as a result of the decomposition of peroxy compounds - methylhydroperoxide and hydrogen peroxide. In reactors treated with potassium bromide, the concentrations of radicals and peroxy compounds were found to be lower than the sensitivity of the method of measurement. Computations were performed for the scheme of methane oxidation at 738 K for a reactor treated with boric acid. Satisfactory agreement was found between the experimental and computed kinetic curves of accumulation of main intermediates CH2O, H2O2, CH3OOH. The influence of their addition on the kinetics of the reaction has been considered. It has been shown that the addition of formaldehyde does not lead to chain branching, however; it contributes to the formation of those peroxy compounds that bring about chain branching. Mathematical modeling confirmed conclusions made on the basis of experimental data concerning the nature of the leading active centers and the products that are responsible for the degenerate chain branching.
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  • 63
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    International Journal of Chemical Kinetics 17 (1985) 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 64
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    International Journal of Chemical Kinetics 17 (1985), S. 991-1006 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Pulsed laser photolysis of N2O5 near 290 nm coupled with fluorescence detection (calibrated by NO2 photolysis) showed that the O(3P) quantum yield is ≤0.1. A pulsed laser optoacoustic technique in a flow tube (ca. 6 torr of N2) was tested by photolysis of NO2 and then applied to N2O5. Nitric oxide was added to react with NO3 free radical and the resulting increase in the optoacoustic signal confirmed the presence of NO3 free radicals. Based on the relative optoacoustic signals observed for NO2 and N2O5, the quantum yield for NO3 production is 0.8 ± 0.2.
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  • 65
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    International Journal of Chemical Kinetics 17 (1985), S. 957-966 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Rate constants for the gas-phase reactions of NO3 radicals with a series of cycloalkenes have been determined at 298 ± 2 K, using a relative rate technique. Using an equilibrium constant for the NO2 + NO3 ⇄ N2O5 reactions of 3.4 × 10-11 cm3 molecule-1, the following rate constants (in units of 10-13 cm3 molecule-1 s-1) were obtained: cyclopentene, 4.52 ± 0.52; cycloheptene, 4.71 ± 0.56; bicyclo[2.2.1]-2-heptene, 2.41 ± 0.28; bicyclo[2.2.2]-2-octene, 1.41 ± 0.17; bicyclo[2.2.1]-2,5-heptadiene, 9.92 ± 1.13; and 1,3,5-cycloheptatriene, 12.6 ± 2.9. When combined with previous literature rate constants for cyclohexene and 1,4-cyclohexadiene, these data show that the rate constants for the nonconjugated cycloalkenes studied depend to a first approximation on the number of double bonds and the degree and configuration of substitution per double bond. No obvious effects of ring strain energy on these NO3 radical addition rate constants were observed. Our previous a priori predictive techniques for the alkenes and cycloalkenes can now be extended to strained cycloalkenes.
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  • 66
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    International Journal of Chemical Kinetics 17 (1985), S. 1007-1015 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The rate of oxygen exchange between trans-[Re(py)4O2]+ and solvent water in pypyH+ buffer solution follows simple first-order kinetics and both oxygens are equivalent. The half-life for isotopic oxygen exchange is about 12 h at a pH of 5.0, 25°C, and [py] = 0.10 M. The observed rate constant for exchange increases with acidity, in the pH range 4 to 6, decreases with [py], and is nearly independent of ionic strength. A small but significant increase of kobs occurs with increasing complex concentration. The rate of exchange follows the rate equation kobs/2 = k0 + k1/[py] with k0 = 1.4 × 10-5(2) s-1 and k1 = 4.7 × 10-7(1) M, s-1 at 25°C. The activation parameters for the reaction at pH = 7.15 (predominately the k0 term) are: ΔH* = +137.(1) kJ/M and ΔS* = +126.(1) J/MK. The pH effect and complex concentration effect are discussed in mechanistic terms. These results are compared to those found for [Re(en)2O2]+ and [Re(CN)4O2]3-.
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  • 67
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    International Journal of Chemical Kinetics 17 (1985), S. 1085-1090 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The condensed-phase thermal decomposition of aliphatic nitrate ester explosives is generally autocatalytic. The object of this article is to show that the agent of the autocatalysis is not the product NO2, as is generally believed, but to suggest that it may be the product formaldehyde.
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  • 68
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    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Part I: Kinetic data for the static system silane pyrolysis (from 640-703 K, 60-400 torr) are presented. For conversion from 3-30%, first-order kinetics are obtained, with silane loss rates equal to half the hydrogen formation rates. At conversions greater than 40%, rate inhibition attributable to the back reaction of hydrogen with silylene occurs. Overall reaction rates are not surface sensitive, but disilane and trisilane yield maxima under some conditions are. A nonchain mechanism capable of describing quantitatively all stages of the silane pyrolysis is proposed. Post 1.0% initiation is both homogeneous (gas phase) and heterogeneous (on the walls), and reaction intermediates are silylenes and disilenes. Free radicals are not involved at any stage of the reaction. Rate data at high conversions and with added hydrogen provide kinetics for the addition of silylene to hydrogen [reaction (-1)1] relative to its addition to silane [reaction (2)]: k-1,/k2 = 10-0.65 × e-3200 cal/RT. With E2 = 1300 cal, this gives a high pressure activation energy for silylene insertion into hydrogen of E-1 = 8200 cal.Part II: An analysis is made of each rate constant of the silane mechanism and the modeling results are compared with experimental results. Agreement is excellent. It is concluded that the dominant sink reaction for silylene intermediates is 1,2 - H2 elimination from disilane (followed by Si2H4 polymerization and wall deposition). The model is in accord with slow isomerization between disilene and silylsilylene and near exclusive 1,2 - H2 elimination from Si2H6. It is also concluded that disilene is about 10 kcal/mol more stable than silylsilylene and that the activation energy for isomerization of silylsilylene to disilene is greater than 26 kcal/mol.
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  • 69
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    International Journal of Chemical Kinetics 17 (1985), S. 1119-1123 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the case of catalytic dehydrogenation of cyclohexane, the linear relation between reaction rate and affinity holds at an appreciable distance away from equilibrium on both sides. In fact, in order to explain this observation, it is necessary to invoke a high value of three for the stoichiometric number of the rate determining step. This in turn can be explained by a reasonable mechanism for the reaction.
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  • 70
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    International Journal of Chemical Kinetics 17 (1985), S. 1155-1167 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Singlet molecular oxygen, O2(1Σg+), is one of the important intermediate species in the atmospheres of Earth, Mars, and Venus. To elucidate the chemistry of this excited molecular oxygen, a series of kinetic measurements have been undertaken using the flow-discharge/optical-emission technique. By monitoring the characteristic emission (762 nm for 1Σg+), the quenching rates for several important molecules have been obtained at room temperature. The following table summarizes measurements. TextQuencherRate Constants (cm3/s)CH2(4.6 ± 0.5) × 10-13H2(7.0 ± 0.3) × 10-13N2(1.7 ± 0.1) × 10-15Cl2(4.5 ± 0.8) × 10-16CO(4.5 ± 0.5) × 10-15O3(2.2 ± 0.3) × 10-112,3 DBM-2(6.0 ± 0.1) × 10-13The error limits represent one standard deviation. The systematic error is estimated to be about 15%. For CO2 and O3 molecules, the quenching rate constants were also measured in the temperature range of 245-362 K. In both reactions, negligible temperature dependences (with the activation energy less than 0.6 kcal/mole) were observed.
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  • 71
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    International Journal of Chemical Kinetics 17 (1985), S. 1187-1190 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Decomposition of (R1R2CXON=)2 (R1 = R2 = Ph; R1 = R2 = p—ClC6H4; R1 = Ph, R2 = CH3; X = H or D) in hydrocarbon solvents at 31-75°C afforded R1R2CO in 6-8% lower yield when X = D than when X = H. This result is ascribed to cage escape of secondary alkoxyl radicals in competition with dismutation. Deuterium isotope effects for alkoxyl cage dismutation of 1.35-2.4 are estimated from the data. It is suggested that this same competition may account for the experimentally slower termination rate constants in solution of primary and secondary alkylperoxyl radicals on α-deuteration.
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  • 72
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    International Journal of Chemical Kinetics 17 (1985), S. 1215-1219 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An electron paramagnetic resonance (EPR) technique was used to show that simple alkyl radicals readily abstract hydrogen from 1,4-cyclohexadiene. Rate constants for the reaction were ca. 104-105 M-1 s-1 at 300 K and activation energies 5-7 kcal mol-1. For the stabilized radicals, allyl and benzyl, the rate constants were 〈102 M-1 s-1 at 300 K. The data suggest that 1,4-cyclohexadiene could be used as an effective trap to probe rearrangement reactions of carbon centered radicals and biradicals.
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  • 73
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    International Journal of Chemical Kinetics 17 (1985), S. 1221-1230 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reaction of CF3 radicals with NH3 has been studied over a wide temperature range 298-673 K, using the photolysis and the thermal decomposition of CF3I as the free radical source.It was found that the reaction could not be explained in terms of a simple mechanism in the whole temperature range because a marked pressure dependence on the rate of products formation and the presence of a dark reaction complicate the system at low temperatures. Thus, Arrhenius parameters for reaction (1) have been calculated relative to the CF3 recombination from data in the range 523-673 K where pure hydrogen transfer occurs. The rate constant expression is given by \documentclass{article}\pagestyle{empty}\begin{document}$$ {\rm log}\,k_H /k_c^{1/2} = (6.17 \pm 0.28) - (57.8 \pm 2.9)/\theta $$\end{document} where kH/kc1/2 is in units of cm3/2/mol1/2 s1/2 and θ = 2.303 RT/kJ/mol.
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  • 74
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    International Journal of Chemical Kinetics 17 (1985), S. 1263-1272 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Kinetics of the complex formation of chromium(III) with alanine in aqueous medium has been studied at 45, 50, and 55°C, pH 3.3-4.4, and μ = 1 M (KNO3). Under pseudo first-order conditions the observed rate constant (kobs) was found to follow the rate equation: \documentclass{article}\pagestyle{empty}\begin{document}$$ k_{{\rm obs}} = \frac{{(k_{{\rm an}} K_{{\rm IP}} K_a [{\rm H}^{\rm + }] + k'_{{\rm an}} K'_{{\rm IP}} K'_a K_a)[{\rm Alanine}]_T }}{{[{\rm H}^{\rm + }]^2 + [{\rm H}^{\rm + }]K_a + [{\rm H}^{\rm + }]K'_a + K_a K'_a + (K_{{\rm IP}} K_a [{\rm H}^{\rm + }] + K'_{{\rm JP}} K'_a K_a)[{\rm Alanine}]_{\rm T} }} $$\end{document} Values of the rate parameters (kan, kan′, KIP, and KIP′) were calculated. Activation parameters for anation rate constants, ΔH≠(kan) = 25 ± 1 kJ mol-1, ΔH≠(kan′) = 91 ± 3 kJ mol-1, and ΔS≠(kan) = -244 ± 3 JK-1 mol-1, ΔS≠(kan′) = -30 ± 10 JK-1 mol-1 are indicative of an (Ia) mechanism for kan and (Id) mechanism for kan′ routes (‥substrate Cr(H2O)63+ is involved in the k route whereas Cr(H2O)5OH2+ is involved in k′ route). Thermodynamic parameters for ion-pair formation constants are found to be ΔH°(KIP) = 12 ± 1 kJ mol-1, ΔH°(KIP′) = -13 ± 3 kJ mol-1 and ΔS°(KIP) = 47 ± 2 JK-1 mol-1, and ΔS°(KIP′) = 20 ± 9 JK-1 mol-1.
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  • 75
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    International Journal of Chemical Kinetics 17 (1985), S. 1299-1314 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Kinetic and spectrophotometric measurements made during the Fe3+ ion catalyzed decomposition of H2O2 have been analyzed using the computer simulation method. Improved values of the rate constants of the “complex scheme” and of the molar absorptivities ofthe intermediates were obtained: k3/KM = 4.94 M-1 min-1, k4 = 193 M-1 min-1, εI/KM = 52.3 M-2 cm-1, εII = 25.7 M-1 cm-1. The simulation revealed details of the reaction which were unavailable by other means and which explained several features of its kinetics. The total amount of O2 evolved in the reaction using [H2O2] ∼ 10-2 M has been calculated and found to be nearly stoichiometric. O2 evolution experiments in this region cannot, thus, distinguish between the “complex mechanism” predicting nearly stoichiometric evolution of O2 and the “free radical mechanism” predicting exactly stoichiometricamounts of O2. There are discrepancies within the “free radical scheme” with regard to the correct values of the rate constants to fit the reactions of H2O2 both with Fe2+ and Fe3+ ions, as well as other reactions assumed to proceed via free radicals.
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  • 76
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    International Journal of Chemical Kinetics 17 (1985), S. 1347-1364 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The variational method of sensitivity analysis is applied to a recent chemical kinetic mechanism for photochemical smog. It is demonstrated that the variational method is capable of readily handling a large mechanism. The analysis can be applied to a single chemical species or to an arbitrarily large group of species contained in an objective function. Examples of the use of different objective functions are given. The variational method provides temporally distributed sensitivity coefficients. Therefore, the results are presented as a time-dependent ranking of reactions in orderof decreasing importance with respect to the objective function species. This ranking permits the time-dependent relative influence of each reaction to be readily determined by inspection. Particular attention is paid to reactions governing daytime O3 formation and nighttime NO3 and HONO formation.
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  • 77
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    International Journal of Chemical Kinetics 17 (1985), S. 1191-1199 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Low pressure (4.67 kPa) CH4/O2/Ar flames were seeded with approximately 5300 ppm NH3. The concentration profiles of stable and radical species in lean (φ = 0.92) and rich (φ = 1.13) flames were determined by molecular beam sampling mass spectrometry. Temperature profiles in these flames were measured with thermocouples whose readings were corrected for radiative losses by the Na-line reversal method. Regions of the flames were selected where the principal reaction leading to the destruction of NH3 was By correcting the measured concentrations for diffusion, the net rate of NH3 loss rate was determined in the temperature range 2080-2360 K. The rate constant k1 was determined from the net loss rate with correction for the reaction using measured values of (O) and k2 values given by Salimian, Hanson, and Kruger [1]. The best-fit Arrhenius expression for k1 in the temperature range 2080-2360 K is 1013.88 exp(-4539/T) cm3/mol-s. The results of this study combined with previous lower temperature data confirm the non-Arrhenius behavior of k1 suggested by Salimian, Hanson, and Kruger [1]. The best-fit modified three parameter expression for the range 300-2360 K is 106.33±0.2 T2 exp(-169/T) cm3/mol-s.
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  • 78
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    International Journal of Chemical Kinetics 17 (1985), S. 1169-1185 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A discharge-flow apparatus with resonance fluorescence and chemiluminescence detection has been used to monitor O2(b 1σg+) production from several reactions of the HO2 radical at 300 K and 1-torr total pressure. O2(b), HO2, and OH were observed when F atoms were added to H2O2 in the gas phase. Signal strengths of O2(b) were proportional to initial concentrations of H2O2 and HO2. These observations were analyzed by using a simple three step mechanism and a more complete computer simulation with 22 reaction steps. The results indicate that the F + HO2 reaction yields O2(b) with an efficiency of (3.6 ± 1.4) × 10-3. By monitoring [O2(b)] and [HO2] upon addition of an excess second reactant to HO2, O2(b) yields from the reactions of HO2 with O, Cl, D, H, and OH were found to be 〈1 × 10-2, 〈5 × 10-4, 〈2 × 10-3, 〈8 × 10-3, and 〈1 × 10-3, respectively. Yields of O2(b) from the HO2 ± HO2 reaction were found to be less than 3 × 10-2.
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  • 79
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    International Journal of Chemical Kinetics 17 (1985), S. 1231-1245 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The kinetics of the chlorination of various tertiary alcoholamines by hypochlorite have been studied in alkaline media. A reaction mechanism consistent with the experimental results is put forward, and a relationship is established between the rate constants and the polar parameter (Σσ*) of the substituents.
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  • 80
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    International Journal of Chemical Kinetics 17 (1985), S. 1273-1274 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 81
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    International Journal of Chemical Kinetics 17 (1985), S. 1275-1279 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 82
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    International Journal of Chemical Kinetics 17 (1985), S. 1315-1320 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The quenching rate constants of O2(1Δg) with n-butylamine, diethylamine, dipropylamine, dibutylamine, and tripropylamine have been determined in a discharge flow system. The rate constants are found to be (1.6 ± 0.2) × 103, (8.5 ± 0.6) × 104, (9.8 ± 0.5) × 104, (2.1 ± 0.1) × 105, and (8.6 ± 0.5) × 105 1 mol-1 s-1, respectively. The rate constants are found to increase in the order, tertiary amine → secondary amine → primary amine. The “inductive effect” of alkyl substitution is also found to increase the rate constant in a given series of amines.
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  • 83
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985) 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 84
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Absolute rate constants for H-atom abstraction by OH radicals from cyclopropane, cyclopentane, and cycloheptane have been determined in the gas phase at 298 K. Hydroxyl radicals were generated by flash photolysis of H2O vapor in the vacuum UV, and monitored by time-resolved resonance absorption at 308.2 nm [OH(A2Σ+→X2Π)]. The rate constants in units of cm3 mol-1 s-1 at the 95% confidence limits were as follows: k(c—C3H6) = (3.74 ± 0.83) × 1010, k(c—C5H10) = (3.12 ± 0.23) × 1012, k(c—C7H14) = (7.88 ± 1.38) × 1012. A linear correlation was found to exist between the logarithm of the rate constant per C—H bond and the corresponding bond dissociation energy for several classes of organic compounds with equivalent C—H bonds. The correlation favors a value of D(c—C3H5-H) = (101 ± 2) kcal mol-1.
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  • 85
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 337-343 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The gas-phase eliminations of several tert-butyl esters, in a static system and in vessels seasoned with allyl bromide, have been studied in the temperature range of 171.5-280.1°C and the pressure range of 23-98 torr. The rate coefficients for the homogeneous unimolecular elimination of these esters are given by the following Arrhenius equations: for tert-butyl pivalate, log k1(s-1) = (13.44 ± 0.30) - (169.1 ± 3.1) kJ · mol-1 (2.303RT)-1; for tert-butyl trichloroacetate, log k1(s-1) = (12.41 ± 0.08) - (141.1 ± 0.7) kJ · mol-1 (2.303RT)-1; and for tert-butyl cyanoacetate log k1(s-1) = (11.31 ± 0.44) - (137.8 ± 4.1) kJ · mol-1 (2.303RT)-1. The data of this work together with those reported in the literature yield a good linear relationship when plotting log k/k0 vs. σ* values (ρ* = 0.635, correlation coefficient r = 0.972, and intercept = 0.048 at 250°C). The positive ρ* value suggests that the movement of negative charge to the acyl carbon in the transition state is rate determining. The present results along with previous investigations ratify the generalization that electron-withdrawing substituents at the acyl side of ethyl, isopropyl, and tert-butyl esters enhance the elimination rates, while electron-releasing groups tend to reduce them. The negative nature of the acyl carbon and the polarity in the transition state increases slightly from primary to tertiary esters.
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  • 86
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 389-399 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Cis- and trans-buten-2-yl free radicals are shown to react with butene-2 cis (Bc) and D2S in the following metathetical steps: giving rise to butenes-1 (B1). The initial formations of butene-1,3 d1 and total butene-1 in D2S—Bc mixtures have been studied in the initial pressure range 20-200 torr for Bc, 0-41 torr for D2S and at 717-817 K. The main initiation and termination steps are shown to be: Assuming a rapid equilibrium between cis- and trans-C4H7⋅, ki ≃ 1015.5 exp(-85.5/RT) s-1 (RT in kcal mol-1) and kt ≃ 1013 mol-1 cm3 s-1, we get: k2c′ = 1.1 k2t′ = 1012.0 exp[(-9.25 ± 2)/RT] mol-1 cm3 s-1 and k2 + 1.5 k2′ ≃ 1012.1 exp[(-15.2 ± 2)/RT] mol-1 cm3 s-1. Isotopic effects relating to processes (2c′) + (2t′) and to (i′) have been evaluated.
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  • 87
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 413-417 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this article, we present low-pressure steady-state results for carbon monoxide oxidation over Rh(100). The results are comparable to those found for other Group VIII transition metals. For a fixed oxygen pressure, the reaction rate is first order in CO pressure until a critical pressure is reached, above which the reaction rate sharply diminishes and the order becomes negative in CO pressure. Coverages of carbon monoxide under steady-state working conditions have been measured.
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  • 88
    Electronic Resource
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985) 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 89
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 477-501 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: n-C3H7ONO was photolyzed with 366 nm radiation at -26, -3, 23, 55, 88, and 120°C in a static system in the presence of NO, O2, and N2. The quantum yields of C2H5CHO, C2H5ONO, and CH3CHO were measured as a function of reaction conditions. The primary photochemical act is and it proceeds with a quantum yield φ1 = 0.38 ± 0.04 independent of temperature. The n-C3H7O radicals can react with NO by two routes The n-C3H7O radical can decompose via or react with O2 via Values of k4/k2 ≃ k4b/k2 were determined to be (2.0 ± 0.2) × 1014, (3.1 ± 0.6) × 1014, and (1.4 ± 0.1) × 1015 molec/cm3 at 55, 88, and 120°C, respectively, at 150-torr total pressure of N2. Values of k6/k2 were determined from -26 to 88°C. They fit the Arrhenius expression: \documentclass{article}\pagestyle{empty}\begin{document}$$ \log (k_6 /k_2) = - 2.17 \pm 0.20 - (879 \pm 117)/2.303{\rm T}{\rm .} $$\end{document} For k2 ≃ 4.4 × 10-11 cm3/s, k6 becomes (2.9 ± 1.7) × 10-13 exp{-(879 ± 117)/T} cm3/s. The reaction scheme also provides k4b/k6 = 1.58 × 1018 molec/cm3 at 120°C and k8a/k8 = 0.56 ± 0.24 independent of temperature, where
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  • 90
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985) 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 91
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 17-31 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reaction has been studied using a discharge-flow tube with resonant fluorescence detection of HO. Measurements of k1 have been made at temperatures between 237 and 404 K. Our results and earlier work suggest that the rate constant has a minimum at T ≃ 500 K. Below room temperature our results are given by the expression k = (2.0 ± 0.4) × 10-14 exp[(430 ± 60)/T] cm3 molecule-1 s-1, where the error limits include an estimate of the measurement accuracy. No dependence of k1 on pressure at 300 K is observed in studies between 1- and 10-torr helium. An upper limit of kb 〈 1% k1 at 300 K is given.
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  • 92
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 55-81 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An eigenvalue-eigenvector analysis is used to extract meaningful kinetic information from linear sensitivity coefficients computed for several species of a reacting system at several time points. The main advantage of this method lies in its ability to reveal those parts of the mechanism which consist of strongly interacting reactions, and to indicate their importance within the mechanism. Results can be used to solve three general kinetic problems. Firstly, an objective condition for constructing a minimal reaction set is presented. Secondly, the uncovered dependencies among the parameters are shown to confirm or deny validity of quasi-steady-state assumptions under the considered experimental conditions. Thirdly, taking into account only sensitivities of observed species, the analysis is used to yield error estimates on unknown parameters determined from the experimental observations, and to suggest the parameters that should be kept fixed in the estimation procedure. To illustrate we chose the well-known hydrogen-bromine reaction and the kinetics of formaldehyde oxidation in the presence of CO.
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  • 93
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 95-108 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The kinetics of the homolytic substitution of several trialkyltin iodides by iodine atoms are presented. Rate constants have been determined at three different temperatures and the following activation parameters calculated: A, Ea, and ΔS°≠. The observation that the activation energy, ΔG≠, is related to the driving force of the ion-pair formation, leads to the conclusion that the charge-transfer model is a valid approach for substitution in the reaction between R3SnI compounds and iodine atoms.
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  • 94
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 109-116 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Di-tert-butyl nitroxide (DTBN) decomposes in aqueous solutions producing 2-methyl-2-nitroso propane (MNP) and tert-butanol. The process is acid catalyzed, it is of second order in DTBN, and takes place with a rate constant of (1.0 ± 0.1) M-2 s-1. The reaction is also catalyzed by the anionic surfactant sodium dodecyl sulfate and by Fe(II) and Fe(III) ions. The catalysis by Fe(III) involves a very fast reduction of Fe(III) ions with concomitant formation of 2-methyl-2-nitroso propane. The reaction catalyzed by Fe(II) also produces 2-methyl-2-nitroso propane with a formation rate given by: d[MNP]/dt = (0.25 ± 0.10) [Fe(II)] [DTBN]. This reaction rate is nearly pH independent.
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  • 95
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 149-156 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The kinetic deuterium isotope effect in the thermal dehydration stages of powdered SrCl2 · 2H2O was examined by means of both isothermal and dynamic gravimetries. These dehydration processes proved to be controlled by a random nucleation and its subsequent growth mechanism. No significant kinetic isotope effect was seen in these dehydration stages. It seems that there exists a kinetic compensation effect between the hydrate and its deuterium analog, if any isotopic differences in activation energy and frequency factor could exist.
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  • 96
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 177-216 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An experimental investigation of the gas-phase photooxidation of toluene-NOx-air mixtures at part-per-million concentrations has been carried out in a 65-m3, outdoor smog chamber to assess our understanding of the atmospheric chemistry of toluene. In addition, six CO—NOx-air irradiations were conducted to characterize the chamber with regard to any wall radical sources. Measured parameters in the toluene-NOx experiments included O3, NO, NO2, HNO3, peroxyacetyl nitrate (PAN), CO, toluene, benzaldehyde, o-cresol, m-nitrotoluene, peroxybenzoyl nitrate (PBZN), temperature, relative humidity, aerosol size distributions, and particulate organic carbon. Predictions of the reaction mechanism of Leone and Seinfeld [7] are found to be in good agreement with the data under a variety of initial conditions. Additional simulations are used to investigate various mechanistic pathways in areas where our understanding of toluene chemistry is still incomplete.
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  • 97
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 1025-1028 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Additional Material: 2 Ill.
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  • 98
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Rate constants for the reaction OH + CO have been measured as functions of temperature (340-1220 K) and water concentration in the presence of 1 atm of argon. Results at zero water concentration yield the expression, log kƒ (cm3 molecule-1 S-1) = -12.96 + 4.7 × 10-4 T, for the reaction rate constant as a function of temperature. These results are in very good agreement with previous direct measurements and in reasonable agreement with flame and shock tube measurements. Explanations are offered for the involvement of the water molecule in the present experiments and earlier measurements from this laboratory throughout the entire temperature range. Results are consistent with previous results showing little, if any, pressure effect of Ar on the reaction up to 1 atm of Ar.
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  • 99
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 345-354 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Calculations are performed to model several phenomena observed when a photosensitive oscillating chemical reaction, the Briggs-Rauscher (BR) reaction, is subject to irradiation in a continuous-flow stirred-tank reactor. The BR mechanism proposed earlier by De Kepper and Epstein is supplemented by additional steps involving the photogeneration and subsequent reaction of iodine atoms. The calculations show qualitative agreement with the following experimentally observed phenomena: (a) change in the period and amplitude of oscillation as a function of the intensity of constant illumination, (b) synchronization between periodically varying illumination and the period of chemical oscillation, (c) phase shifts induced by single light pulses, and (d) dark steady states which are excitable by single light pulses and become oscillatory at appropriate levels of constant illumination.
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  • 100
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    New York, NY : Wiley-Blackwell
    International Journal of Chemical Kinetics 17 (1985), S. 367-380 
    ISSN: 0538-8066
    Keywords: Chemistry ; Physical Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The available RRKM programs which cover the full pressure range (high → low-pressure limits) were written for nonreversible reactions. For reversible reactions the correct shapes of the fall-off curves can be estimated by applying a correction factor to the RRKM bimolecular rate constant, which depends on a ratio of state densities at the potential maximum. It is proposed that the analysis of such systems in terms of relaxation kinetics provides a more rational treatment, free of the ambiguities associated with specifying a “transition state.”
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